MGE detailed information
MGE type: Prophage MGE length: 68853 bp
Accession: NZ_CP038284 Location: 4405808..4474660 Organism: Escherichia coli O157:H7 strain YB14-1 Replicon: chromosome
Accession: NZ_CP038284 Location: 4405808..4474660 Organism: Escherichia coli O157:H7 strain YB14-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4U79_RS22115 () | 4401633..4402691 | - | 1059 | WP_001303808.1 | alpha/beta hydrolase | - |
| E4U79_RS22120 () | 4402937..4403839 | + | 903 | WP_010917758.1 | LysR family transcriptional regulator | - |
| E4U79_RS22125 () | 4404542..4404820 | - | 279 | WP_001301751.1 | hypothetical protein | - |
| E4U79_RS22130 () | 4404987..4405709 | - | 723 | WP_000361969.1 | SDR family oxidoreductase | - |
| E4U79_RS22135 () | 4405808..4406707 | + | 900 | WP_000687183.1 | HTH-type transcriptional regulator ArgP | VF |
| E4U79_RS22140 () | 4407383..4408339 | + | 957 | WP_000205213.1 | hypothetical protein | - |
| E4U79_RS22145 () | 4408472..4410805 | - | 2334 | WP_000016225.1 | toprim domain-containing protein | - |
| E4U79_RS22150 () | 4410819..4411142 | - | 324 | WP_000562750.1 | DUF5375 family protein | - |
| E4U79_RS22155 () | 4411142..4411363 | - | 222 | WP_001071227.1 | hypothetical protein | - |
| E4U79_RS22160 () | 4411360..4411917 | - | 558 | WP_000973389.1 | host cell division inhibitor Icd-like protein | - |
| E4U79_RS22165 () | 4411914..4412174 | - | 261 | WP_001244581.1 | AlpA family transcriptional regulator | - |
| E4U79_RS22170 () | 4413108..4413860 | + | 753 | WP_000154958.1 | septation initiation protein | - |
| E4U79_RS22175 () | 4413857..4414408 | + | 552 | WP_000968317.1 | Polarity suppression protein | - |
| E4U79_RS22180 () | 4414414..4414686 | + | 273 | WP_001185340.1 | ogr/Delta-like zinc finger family protein | - |
| E4U79_RS22185 () | 4415096..4415662 | - | 567 | WP_000350115.1 | hypothetical protein | - |
| E4U79_RS22190 () | 4415662..4416252 | - | 591 | WP_000647284.1 | hypothetical protein | - |
| E4U79_RS22195 () | 4416283..4416915 | - | 633 | WP_000999326.1 | AAA family ATPase | - |
| E4U79_RS22200 () | 4416908..4417366 | - | 459 | WP_000251694.1 | hypothetical protein | - |
| E4U79_RS22205 () | 4417366..4417983 | - | 618 | WP_001303996.1 | hypothetical protein | - |
| E4U79_RS22210 () | 4417956..4418372 | - | 417 | WP_000082144.1 | hypothetical protein | - |
| E4U79_RS22215 () | 4418376..4419557 | - | 1182 | WP_001130487.1 | hypothetical protein ; Integrase | Integrase |
| E4U79_RS22220 () | 4420044..4420478 | + | 435 | Protein_4352 | IS3 family transposase ISEc48 | Transposase |
| E4U79_RS22225 () | 4420520..4421263 | - | 744 | WP_000246059.1 | AraC family transcriptional regulator | - |
| E4U79_RS22230 () | 4422088..4422861 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| E4U79_RS22235 () | 4422922..4423476 | - | 555 | WP_000905124.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| E4U79_RS22240 () | 4423507..4423917 | + | 411 | WP_001145350.1 | hypothetical protein | - |
| E4U79_RS22245 () | 4423938..4424381 | + | 444 | WP_001008234.1 | tail fiber assembly protein | - |
| E4U79_RS22250 () | 4424353..4424955 | - | 603 | WP_000368084.1 | tail fiber assembly protein | - |
| E4U79_RS22255 () | 4424955..4425725 | - | 771 | WP_000554706.1 | phage tail protein | - |
| E4U79_RS22260 () | 4425729..4426313 | - | 585 | WP_000383550.1 | YmfQ family protein | - |
| E4U79_RS22265 () | 4426304..4427362 | - | 1059 | WP_000785302.1 | baseplate J/gp47 family protein | - |
| E4U79_RS22270 () | 4427349..4427774 | - | 426 | WP_000424732.1 | phage GP46 family protein | - |
| E4U79_RS22275 () | 4427774..4428322 | - | 549 | WP_001259066.1 | phage baseplate assembly protein V | - |
| E4U79_RS22280 () | 4428322..4429401 | - | 1080 | WP_000999513.1 | baseplate protein | - |
| E4U79_RS22285 () | 4429398..4430726 | - | 1329 | WP_000219910.1 | DNA circularization N-terminal domain-containing protein | - |
| E4U79_RS22290 () | 4430787..4432622 | - | 1836 | WP_000807197.1 | phage tail tape measure protein | - |
| E4U79_RS22295 () | 4432764..4433033 | - | 270 | WP_000661054.1 | phage tail assembly protein | - |
| E4U79_RS22300 () | 4433033..4433389 | - | 357 | WP_000090993.1 | phage tail tube protein | - |
| E4U79_RS22305 () | 4433389..4434885 | - | 1497 | WP_000155728.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| E4U79_RS22310 () | 4434869..4435039 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| E4U79_RS22315 () | 4435048..4435608 | - | 561 | WP_000779288.1 | hypothetical protein | - |
| E4U79_RS22320 () | 4435605..4436111 | - | 507 | WP_000224836.1 | hypothetical protein | - |
| E4U79_RS22325 () | 4436086..4436496 | - | 411 | WP_000702395.1 | phage head closure protein | - |
| E4U79_RS22330 () | 4436493..4436816 | - | 324 | WP_000924828.1 | head-tail connector protein | - |
| E4U79_RS22335 () | 4436895..4438124 | - | 1230 | WP_000766100.1 | phage major capsid protein | - |
| E4U79_RS22340 () | 4438135..4438737 | - | 603 | WP_000999805.1 | HK97 family phage prohead protease | - |
| E4U79_RS22345 () | 4438730..4439956 | - | 1227 | WP_000923141.1 | phage portal protein | - |
| E4U79_RS22350 () | 4439946..4440107 | - | 162 | WP_000838374.1 | hypothetical protein | - |
| E4U79_RS22355 () | 4440104..4441600 | - | 1497 | WP_128484532.1 | terminase large subunit | - |
| E4U79_RS22360 () | 4441834..4442328 | - | 495 | WP_000929175.1 | phage terminase small subunit P27 family | - |
| E4U79_RS22365 () | 4442454..4442678 | - | 225 | Protein_4381 | HNH endonuclease | - |
| E4U79_RS22370 () | 4442731..4443944 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| E4U79_RS22375 () | 4443989..4444117 | - | 129 | Protein_4383 | HNH endonuclease | - |
| E4U79_RS22380 () | 4444643..4444936 | + | 294 | WP_000738423.1 | increased serum survival lipoprotein Iss | - |
| E4U79_RS22385 () | 4445027..4445209 | - | 183 | WP_001228695.1 | prophage lysis lipoprotein RzoD | - |
| E4U79_RS22390 () | 4445426..4445902 | - | 477 | WP_001197766.1 | glycoside hydrolase family protein | - |
| E4U79_RS22395 () | 4445906..4446241 | - | 336 | WP_001120501.1 | phage holin, lambda family | - |
| E4U79_RS22400 () | 4446378..4446671 | - | 294 | WP_001449601.1 | site-specific DNA-methyltransferase | - |
| E4U79_RS22405 () | 4446950..4447183 | - | 234 | WP_001310393.1 | hypothetical protein | - |
| E4U79_RS22410 () | 4447327..4447866 | - | 540 | WP_000484663.1 | hypothetical protein | - |
| E4U79_RS22415 () | 4448081..4448833 | - | 753 | WP_001008431.1 | antitermination protein | - |
| E4U79_RS22420 () | 4448847..4449836 | - | 990 | WP_001360050.1 | DUF968 domain-containing protein | - |
| E4U79_RS22425 () | 4449844..4450653 | - | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| E4U79_RS22430 () | 4450673..4451062 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E4U79_RS22435 () | 4451059..4451385 | - | 327 | WP_000210141.1 | LexA family transcriptional regulator | - |
| E4U79_RS22440 () | 4451382..4452035 | - | 654 | WP_001303054.1 | phage N-6-adenine-methyltransferase | - |
| E4U79_RS22445 () | 4452035..4452529 | - | 495 | WP_072141203.1 | PerC family transcriptional regulator | - |
| E4U79_RS22450 () | 4452526..4453467 | - | 942 | WP_000104949.1 | helix-turn-helix domain-containing protein | - |
| E4U79_RS22455 () | 4453457..4453636 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| E4U79_RS22460 () | 4453812..4454363 | - | 552 | WP_000515845.1 | protein YmfL | - |
| E4U79_RS22465 () | 4454356..4454616 | - | 261 | WP_001191674.1 | helix-turn-helix transcriptional regulator | - |
| E4U79_RS22470 () | 4454714..4455406 | + | 693 | WP_001020634.1 | helix-turn-helix transcriptional regulator | - |
| E4U79_RS22475 () | 4455684..4455980 | + | 297 | WP_000917896.1 | hypothetical protein | - |
| E4U79_RS22480 () | 4456657..4457193 | + | 537 | WP_000008235.1 | 5'-deoxynucleotidase | - |
| E4U79_RS22485 () | 4457184..4457546 | + | 363 | WP_001242749.1 | phage protein | - |
| E4U79_RS22490 () | 4457546..4457851 | + | 306 | WP_000206732.1 | hypothetical protein | - |
| E4U79_RS22495 () | 4458078..4459241 | + | 1164 | WP_000051887.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| E4U79_RS22505 () | 4459446..4460699 | - | 1254 | WP_000893282.1 | glutamate-5-semialdehyde dehydrogenase | - |
| E4U79_RS22510 () | 4460711..4461814 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| E4U79_RS22515 () | 4462102..4463157 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| E4U79_RS22520 () | 4463196..4463597 | - | 402 | WP_000174701.1 | sigma factor-binding protein Crl | - |
| E4U79_RS22525 () | 4463655..4464899 | - | 1245 | WP_000189536.1 | esterase FrsA | - |
| - () | 4464315..4464395 | - | 81 | NuclAT_11 | - | - |
| - () | 4464315..4464395 | - | 81 | NuclAT_11 | - | - |
| - () | 4464315..4464395 | - | 81 | NuclAT_11 | - | - |
| - () | 4464315..4464395 | - | 81 | NuclAT_11 | - | - |
| E4U79_RS22530 () | 4464991..4465449 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| E4U79_RS22535 () | 4465710..4467167 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| E4U79_RS22540 () | 4467224..4467781 | - | 558 | WP_023438539.1 | peptide chain release factor H | - |
| E4U79_RS22545 () | 4467693..4467959 | - | 267 | WP_001303804.1 | hypothetical protein | - |
| E4U79_RS22550 () | 4468266..4468718 | - | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
| E4U79_RS22555 () | 4468728..4469126 | - | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| E4U79_RS22560 () | 4469129..4469422 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| E4U79_RS22565 () | 4469474..4470529 | - | 1056 | WP_001226186.1 | DNA polymerase IV | - |
| E4U79_RS22570 () | 4470600..4471385 | - | 786 | WP_000207556.1 | hypothetical protein | VF |
| E4U79_RS22575 () | 4471330..4473069 | + | 1740 | WP_001301901.1 | hypothetical protein | VF |
| E4U79_RS22580 () | 4473214..4473711 | - | 498 | Protein_4423 | REP-associated tyrosine transposase RayT | - |
| E4U79_RS22585 () | 4473887..4474660 | - | 774 | WP_000543891.1 | hypothetical protein | VF |
| E4U79_RS22590 () | 4474846..4475106 | + | 261 | WP_000729705.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| E4U79_RS22595 () | 4475125..4475385 | + | 261 | WP_001303998.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| E4U79_RS22600 () | 4475541..4476281 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| E4U79_RS22605 () | 4476252..4477019 | - | 768 | WP_001301698.1 | class II glutamine amidotransferase | - |
| E4U79_RS22610 () | 4477124..4477702 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|