MGE detailed information
MGE type: Genomic_island MGE length: 65523 bp
Accession: NZ_CP037945 Location: 2415775..2481297 Organism: Escherichia coli strain CFSAN027346 Replicon: chromosome
Accession: NZ_CP037945 Location: 2415775..2481297 Organism: Escherichia coli strain CFSAN027346 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKI52_RS12870 () | 2411870..2412445 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| EKI52_RS12880 () | 2412825..2414090 | + | 1266 | WP_001218841.1 | integrase arm-type DNA-binding domain-containing protein | - |
| EKI52_RS12885 () | 2414207..2415778 | - | 1572 | WP_000704132.1 | IS66 family transposase | - |
| EKI52_RS12890 () | 2415775..2417394 | - | 1620 | WP_001375513.1 | ISL3 family transposase ISEc38 | Transposase |
| EKI52_RS12895 () | 2417490..2418269 | + | 780 | Protein_2456 | IS4 family transposase ISEc13 | Transposase |
| EKI52_RS12910 () | 2419057..2420706 | + | 1650 | WP_001121617.1 | hypothetical protein | VF |
| EKI52_RS12915 () | 2420924..2421073 | + | 150 | Protein_2458 | IS1 family transposase | - |
| EKI52_RS12920 () | 2421314..2422303 | + | 990 | WP_000953025.1 | hypothetical protein | VF |
| EKI52_RS12925 () | 2422352..2423026 | + | 675 | WP_000609742.1 | hypothetical protein | VF |
| EKI52_RS12930 () | 2423362..2424303 | + | 942 | Protein_2461 | IS630 family transposase ISEc33 | Transposase |
| EKI52_RS12935 () | 2424904..2434575 | + | 9672 | WP_001239078.1 | hypothetical protein | VF |
| EKI52_RS12940 () | 2434747..2435097 | + | 351 | Protein_2463 | IS256 family transposase ISEic2 | Transposase |
| EKI52_RS12945 () | 2435510..2436133 | - | 624 | WP_001443729.1 | hypothetical protein | VF |
| EKI52_RS12950 () | 2436349..2436627 | - | 279 | WP_000245867.1 | hypothetical protein | VF |
| EKI52_RS12955 () | 2436633..2436854 | - | 222 | WP_001053840.1 | hypothetical protein | VF |
| EKI52_RS12960 () | 2436891..2437298 | - | 408 | WP_000228587.1 | hypothetical protein | VF |
| EKI52_RS12965 () | 2437305..2438249 | - | 945 | WP_001092012.1 | hypothetical protein | VF |
| EKI52_RS12970 () | 2438270..2439412 | - | 1143 | WP_000935768.1 | hypothetical protein | VF |
| EKI52_RS12975 () | 2439425..2440003 | - | 579 | WP_000381555.1 | hypothetical protein | VF |
| EKI52_RS12980 () | 2440061..2441116 | - | 1056 | WP_001273459.1 | hypothetical protein | VF |
| EKI52_RS12985 () | 2441259..2442479 | + | 1221 | WP_000953242.1 | hypothetical protein | VF |
| EKI52_RS12990 () | 2442694..2445513 | - | 2820 | WP_000627895.1 | hypothetical protein | VF |
| EKI52_RS12995 () | 2445574..2446044 | - | 471 | WP_000098786.1 | hypothetical protein | VF |
| EKI52_RS13000 () | 2446177..2447793 | - | 1617 | WP_001121330.1 | hypothetical protein | VF |
| EKI52_RS13005 () | 2448240..2448851 | - | 612 | WP_000492643.1 | hypothetical protein | VF |
| EKI52_RS13010 () | 2449102..2449461 | + | 360 | WP_001005230.1 | hypothetical protein | VF |
| EKI52_RS13015 () | 2449680..2450195 | - | 516 | WP_001360071.1 | hypothetical protein | VF |
| EKI52_RS13020 () | 2450226..2451143 | - | 918 | WP_001050796.1 | hypothetical protein | VF |
| EKI52_RS13025 () | 2451106..2451522 | - | 417 | WP_001443671.1 | hypothetical protein | VF |
| EKI52_RS13030 () | 2451515..2451835 | - | 321 | WP_001062953.1 | hypothetical protein | VF |
| EKI52_RS13035 () | 2451895..2453235 | - | 1341 | WP_000599710.1 | ATP synthase subunit beta | VF |
| EKI52_RS13040 () | 2453219..2455246 | - | 2028 | WP_001037820.1 | hypothetical protein | VF |
| EKI52_RS13045 () | 2455243..2455596 | - | 354 | WP_001050414.1 | hypothetical protein | VF |
| EKI52_RS13050 () | 2455780..2456082 | + | 303 | WP_000338348.1 | hypothetical protein | VF |
| EKI52_RS13055 () | 2456166..2456543 | + | 378 | WP_001059795.1 | hypothetical protein | VF |
| EKI52_RS13060 () | 2456545..2457117 | + | 573 | WP_001233824.1 | hypothetical protein | VF |
| EKI52_RS13065 () | 2457123..2457578 | + | 456 | WP_001063688.1 | hypothetical protein | VF |
| EKI52_RS13070 () | 2457578..2459116 | + | 1539 | WP_000723928.1 | hypothetical protein | VF |
| EKI52_RS13075 () | 2459130..2459585 | + | 456 | WP_000087469.1 | hypothetical protein | VF |
| EKI52_RS13080 () | 2459971..2460384 | - | 414 | WP_000534969.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| EKI52_RS13085 () | 2460459..2460815 | - | 357 | WP_000605356.1 | nucleoside transporter | - |
| EKI52_RS13090 () | 2461012..2461470 | + | 459 | WP_001342442.1 | hypothetical protein | VF |
| EKI52_RS13095 () | 2461467..2462504 | - | 1038 | WP_001291687.1 | hypothetical protein | VF |
| EKI52_RS13100 () | 2462497..2463273 | - | 777 | WP_001002808.1 | hypothetical protein | VF |
| EKI52_RS13105 () | 2463273..2463542 | - | 270 | WP_000447503.1 | hypothetical protein | VF |
| EKI52_RS13110 () | 2463542..2464195 | - | 654 | WP_001299990.1 | hypothetical protein | VF |
| EKI52_RS13115 () | 2464200..2464853 | - | 654 | WP_000780743.1 | hypothetical protein | VF |
| EKI52_RS13120 () | 2464840..2465439 | - | 600 | WP_000153999.1 | hypothetical protein | VF |
| EKI52_RS13125 () | 2465436..2465750 | - | 315 | WP_000084152.1 | hypothetical protein | VF |
| EKI52_RS13130 () | 2465763..2465981 | - | 219 | WP_096955191.1 | hypothetical protein | VF |
| EKI52_RS13135 () | 2465996..2466367 | - | 372 | WP_001365456.1 | type III secretion system LEE master regulator Ler | - |
| EKI52_RS13140 () | 2467575..2468720 | + | 1146 | WP_000606968.1 | hypothetical protein | VF |
| EKI52_RS13145 () | 2468867..2469685 | + | 819 | WP_000821600.1 | YjiK family protein | - |
| EKI52_RS13150 () | 2469891..2470466 | + | 576 | Protein_2505 | hypothetical protein | VF |
| EKI52_RS13155 () | 2470513..2471063 | + | 551 | Protein_2506 | IS3 family transposase IS2 | Transposase |
| EKI52_RS13160 () | 2471048..2471197 | + | 150 | WP_071527582.1 | DUF957 domain-containing protein | - |
| EKI52_RS13165 () | 2471946..2473484 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| EKI52_RS13175 () | 2473850..2475184 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| EKI52_RS13180 () | 2475264..2477411 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| EKI52_RS13185 () | 2477470..2478927 | + | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| EKI52_RS13190 () | 2479164..2480681 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| EKI52_RS13195 () | 2480800..2480973 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| EKI52_RS13200 () | 2481001..2481297 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| EKI52_RS13205 () | 2481524..2481796 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| EKI52_RS13210 () | 2481808..2482038 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| EKI52_RS13215 () | 2482219..2483850 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| EKI52_RS13220 () | 2483847..2484566 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|