MGE detailed information
MGE type: IScluster/Tn MGE length: 24301 bp
Accession: NZ_CP037924 Location: 207052..231352 Organism: Shigella flexneri 5a str. M90T Replicon: plasmid pWR100
Accession: NZ_CP037924 Location: 207052..231352 Organism: Shigella flexneri 5a str. M90T Replicon: plasmid pWR100
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKN05_RS24770 (EKN05_024795) | 202592..202828 | + | 237 | WP_000588812.1 | phosphopantetheine-binding protein | - |
| EKN05_RS24775 (EKN05_024800) | 203045..203974 | + | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| EKN05_RS24780 (EKN05_024805) | 204920..205699 | - | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| EKN05_RS26020 | 205896..206705 | - | 810 | Protein_247 | IS110 family transposase | - |
| EKN05_RS24785 (EKN05_024810) | 207052..208056 | + | 1005 | WP_000255980.1 | IS21 family transposase | - |
| EKN05_RS24790 (EKN05_024815) | 208248..209444 | + | 1197 | WP_010921660.1 | IS110-like element ISSfl4 family transposase | - |
| EKN05_RS25430 (EKN05_024820) | 209495..210332 | - | 838 | Protein_250 | IS4 family transposase | - |
| EKN05_RS25345 | 210315..210656 | - | 342 | Protein_251 | IS21 family transposase | - |
| EKN05_RS24800 (EKN05_024825) | 210818..211351 | - | 534 | Protein_252 | IS3 family transposase | - |
| EKN05_RS24805 (EKN05_024830) | 211395..212459 | - | 1065 | Protein_253 | IS3 family transposase | - |
| EKN05_RS24815 (EKN05_024840) | 212797..214251 | - | 1455 | WP_010921657.1 | type 3 secretion system effector OspC4 | - |
| EKN05_RS24820 (EKN05_024845) | 214824..215498 | + | 675 | WP_010921654.1 | IS66-like element accessory protein TnpA | - |
| EKN05_RS24825 (EKN05_024850) | 215495..215845 | + | 351 | WP_005048975.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| EKN05_RS24830 (EKN05_024855) | 215842..217438 | + | 1597 | Protein_257 | IS66-like element ISSfl3 family transposase | - |
| EKN05_RS25350 | 217692..217856 | - | 165 | WP_001346193.1 | hypothetical protein | - |
| EKN05_RS24855 (EKN05_024880) | 218758..219042 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| EKN05_RS24860 (EKN05_024885) | 219030..219515 | + | 486 | WP_010921647.1 | GNAT family N-acetyltransferase | Toxin Detail |
| EKN05_RS24865 (EKN05_024890) | 219688..219969 | - | 282 | Protein_261 | IS4/IS5 family transposase | - |
| EKN05_RS24870 (EKN05_024895) | 220036..221192 | + | 1157 | WP_136350434.1 | IS3-like element IS600 family transposase | - |
| EKN05_RS24875 (EKN05_024900) | 221307..222535 | + | 1229 | WP_094081542.1 | IS3-like element IS2 family transposase | - |
| EKN05_RS24880 (EKN05_024905) | 222573..222716 | + | 144 | Protein_264 | DUF3440 domain-containing protein | - |
| EKN05_RS24885 (EKN05_024910) | 222701..223339 | + | 639 | WP_000502855.1 | ParB N-terminal domain-containing protein | - |
| EKN05_RS24890 (EKN05_024915) | 223567..223996 | + | 430 | Protein_266 | hypothetical protein | - |
| EKN05_RS24895 (EKN05_024920) | 223984..224457 | + | 474 | WP_005038443.1 | AraC family transcriptional regulator | - |
| EKN05_RS24900 (EKN05_024925) | 224546..225411 | + | 866 | WP_086020993.1 | IS5-like element ISSfl7 family transposase | - |
| EKN05_RS26155 | 225448..225579 | - | 132 | WP_000124143.1 | hypothetical protein | - |
| EKN05_RS24905 (EKN05_024930) | 225661..225854 | + | 194 | Protein_270 | HNH endonuclease signature motif containing protein | - |
| EKN05_RS24910 (EKN05_024935) | 225997..226218 | + | 222 | Protein_271 | transposase | - |
| EKN05_RS24915 (EKN05_024940) | 226239..226301 | - | 63 | Protein_272 | IS66 family insertion sequence element accessory protein TnpB | - |
| EKN05_RS24920 (EKN05_024945) | 226751..228163 | + | 1413 | WP_010921643.1 | type 3 secretion system effector OspC1 | - |
| EKN05_RS24925 (EKN05_024950) | 228267..228417 | - | 151 | Protein_274 | IS1 family transposase | - |
| EKN05_RS24930 (EKN05_024955) | 228493..230190 | + | 1698 | WP_010921642.1 | type III secretion system effector OspD3 | - |
| EKN05_RS24940 (EKN05_024965) | 230307..230426 | + | 120 | Protein_276 | IS66 family insertion sequence element accessory protein TnpB | - |
| EKN05_RS24950 (EKN05_024975) | 230593..230865 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| EKN05_RS24955 (EKN05_024980) | 230846..232056 | + | 1211 | Protein_278 | IS91 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|