MGE detailed information
MGE type: IScluster/Tn MGE length: 17563 bp
Accession: NZ_CP037924 Location: 123807..141369 Organism: Shigella flexneri 5a str. M90T Replicon: plasmid pWR100
Accession: NZ_CP037924 Location: 123807..141369 Organism: Shigella flexneri 5a str. M90T Replicon: plasmid pWR100
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EKN05_RS24240 (EKN05_024260) | 118891..119733 | - | 843 | WP_000931197.1 | polysaccharide deacetylase family protein | - |
| EKN05_RS24250 (EKN05_024270) | 120216..123128 | + | 2913 | WP_010921718.1 | ankyrin repeat domain-containing protein | - |
| EKN05_RS24255 (EKN05_024275) | 123158..123482 | - | 325 | Protein_146 | IS3 family transposase | - |
| EKN05_RS26000 (EKN05_024280) | 123480..123672 | + | 193 | Protein_147 | IS66 family insertion sequence element accessory protein TnpB | - |
| EKN05_RS26005 | 123686..123766 | - | 81 | Protein_148 | hypothetical protein | - |
| EKN05_RS24265 (EKN05_024285) | 123807..125016 | - | 1210 | Protein_149 | IS3 family transposase | - |
| EKN05_RS24270 (EKN05_024290) | 125073..126341 | - | 1269 | Protein_150 | IS4-like element IS4 family transposase | - |
| EKN05_RS24275 (EKN05_024295) | 126404..126670 | - | 267 | Protein_151 | IS66 family insertion sequence element accessory protein TnpB | - |
| EKN05_RS24280 (EKN05_024300) | 126753..127450 | + | 698 | WP_228445100.1 | IS1 family transposase | - |
| EKN05_RS24285 (EKN05_024305) | 127803..128393 | - | 591 | WP_000705601.1 | type III secretion system effector protein kinase OspG | - |
| EKN05_RS25425 | 128476..128645 | - | 170 | Protein_154 | type II toxin-antitoxin system toxin YacB | - |
| EKN05_RS24295 (EKN05_024315) | 128645..128914 | - | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| EKN05_RS24300 (EKN05_024320) | 129122..130759 | - | 1638 | WP_000936806.1 | T3SS effector E3 ubiquitin-protein ligase IpaH9.8 | - |
| EKN05_RS24305 (EKN05_024325) | 131021..131128 | - | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| EKN05_RS24310 (EKN05_024330) | 131152..131457 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| EKN05_RS24315 (EKN05_024335) | 131459..131677 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| EKN05_RS24320 (EKN05_024340) | 132213..133163 | - | 951 | Protein_160 | IS66 family transposase | - |
| EKN05_RS24325 (EKN05_024345) | 133223..133920 | + | 698 | WP_228445099.1 | IS1 family transposase | - |
| EKN05_RS24330 (EKN05_024350) | 133938..134393 | + | 456 | Protein_162 | IS1 family transposase | - |
| EKN05_RS25320 | 134552..135190 | + | 639 | WP_010921709.1 | type III secretion system effector OspI | - |
| EKN05_RS24340 (EKN05_024360) | 135305..135460 | + | 156 | Protein_164 | transposase | - |
| EKN05_RS24345 (EKN05_024365) | 135612..136840 | + | 1229 | WP_088895425.1 | IS3-like element IS2 family transposase | - |
| EKN05_RS24350 (EKN05_024370) | 136860..137947 | + | 1088 | Protein_166 | IS3-like element IS2 family transposase | - |
| EKN05_RS24355 (EKN05_024375) | 138027..138701 | + | 675 | WP_004967157.1 | IS66-like element accessory protein TnpA | - |
| EKN05_RS24360 (EKN05_024380) | 138698..139048 | + | 351 | WP_005048975.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| EKN05_RS24365 (EKN05_024385) | 139045..140641 | + | 1597 | Protein_169 | IS66-like element ISSfl3 family transposase | - |
| EKN05_RS24370 (EKN05_024390) | 140650..141369 | + | 720 | Protein_170 | IS110 family transposase | - |
| EKN05_RS24380 (EKN05_024400) | 141708..142478 | - | 771 | WP_001006196.1 | hypothetical protein | - |
| EKN05_RS24385 (EKN05_024405) | 142523..143009 | - | 487 | Protein_172 | DUF1380 family protein | - |
| EKN05_RS24390 (EKN05_024410) | 142969..143190 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| EKN05_RS24395 (EKN05_024415) | 143191..143874 | - | 684 | WP_010921705.1 | DNA methylase | - |
| EKN05_RS24400 (EKN05_024420) | 143938..144249 | - | 312 | WP_031942478.1 | hypothetical protein | - |
| EKN05_RS24405 (EKN05_024425) | 144246..145171 | - | 926 | Protein_176 | DUF1281 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|