MGE detailed information
MGE type: Genomic_island MGE length: 25974 bp
Accession: NZ_CP035897 Location: 930710..956683 Organism: Streptococcus pneumoniae strain EF3030 Replicon: chromosome
Accession: NZ_CP035897 Location: 930710..956683 Organism: Streptococcus pneumoniae strain EF3030 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EF3030_RS04960 () | 925995..926609 | + | 615 | WP_000476375.1 | cell wall hydrolase Pmp23 | - |
| EF3030_RS04965 () | 926683..927657 | + | 975 | WP_001227738.1 | DUF1002 domain-containing protein | - |
| EF3030_RS04970 () | 927731..929362 | + | 1632 | WP_000914563.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| EF3030_RS04975 () | 929576..929809 | + | 234 | WP_000710799.1 | hypothetical protein | - |
| EF3030_RS04980 () | 930100..930317 | + | 218 | Protein_924 | helix-turn-helix transcriptional regulator | - |
| EF3030_RS04990 () | 930710..931735 | + | 1026 | WP_000790743.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| EF3030_RS04995 () | 931725..932732 | + | 1008 | WP_001244693.1 | Ferric enterobactin transport system permease protein FepD | VF |
| EF3030_RS05000 () | 932732..933739 | + | 1008 | WP_001180357.1 | putative siderophore transport system permease protein YfhA | VF |
| EF3030_RS05005 () | 933739..934533 | + | 795 | WP_000677525.1 | putative siderophore transport system ATP-binding protein YusV | VF |
| EF3030_RS05010 () | 934921..935346 | + | 426 | WP_075270856.1 | restriction endonuclease subunit S | - |
| EF3030_RS05015 () | 935402..935719 | + | 318 | WP_000968321.1 | DUF3847 domain-containing protein | - |
| EF3030_RS05020 () | 936033..937672 | + | 1640 | Protein_931 | MobA/MobL family protein | - |
| EF3030_RS11375 () | 937746..937919 | + | 174 | WP_001042635.1 | hypothetical protein | - |
| EF3030_RS05025 () | 938105..938556 | + | 452 | Protein_933 | PcfB family protein | - |
| EF3030_RS05030 () | 938683..939411 | + | 729 | WP_000224685.1 | phage replisome organizer N-terminal domain-containing protein | - |
| EF3030_RS05035 () | 940095..940256 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| EF3030_RS05040 () | 940348..942027 | + | 1680 | WP_000031825.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| EF3030_RS05045 () | 942295..942861 | + | 567 | WP_000234983.1 | hypothetical protein | - |
| EF3030_RS05050 () | 943183..943371 | + | 189 | WP_000179769.1 | hypothetical protein | - |
| EF3030_RS05055 () | 943433..944191 | + | 759 | WP_000262004.1 | ATP-grasp domain-containing protein | - |
| EF3030_RS05060 () | 944249..945103 | + | 855 | WP_000900020.1 | ADP-ribosylglycohydrolase family protein | - |
| EF3030_RS05065 () | 945215..946099 | + | 885 | WP_000710115.1 | diacylglycerol kinase family lipid kinase | - |
| EF3030_RS05070 () | 946262..948001 | + | 1740 | Protein_942 | alpha-glycosidase | - |
| EF3030_RS05075 () | 948276..948731 | + | 456 | WP_000500474.1 | hypothetical protein | - |
| EF3030_RS05080 () | 949176..949652 | + | 477 | WP_000579613.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| EF3030_RS05085 () | 949652..950413 | + | 762 | WP_000405362.1 | toxin PezT | Toxin Detail |
| EF3030_RS05090 () | 950441..951217 | + | 777 | Protein_946 | hypothetical protein | - |
| EF3030_RS05095 () | 951145..951597 | + | 453 | WP_001808559.1 | hypothetical protein | - |
| EF3030_RS05100 () | 952416..952775 | + | 360 | WP_000003750.1 | hypothetical protein | - |
| EF3030_RS05105 () | 952785..953150 | + | 366 | WP_000263054.1 | MobC family plasmid mobilization relaxosome protein | - |
| EF3030_RS05110 () | 953137..954995 | + | 1859 | Protein_950 | relaxase/mobilization nuclease domain-containing protein | - |
| EF3030_RS05115 () | 955251..956683 | + | 1433 | Protein_951 | IS1182 family transposase | - |
| EF3030_RS05120 () | 956921..957055 | - | 135 | Protein_952 | transposase family protein | - |
| EF3030_RS05125 () | 957376..958329 | - | 954 | WP_001155321.1 | IS30-like element ISSpn8 family transposase | - |
| EF3030_RS05130 () | 958933..959976 | + | 1044 | WP_001812710.1 | TIGR00341 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|