MGE detailed information
MGE type: Mobilizable plasmid MGE length: 88752 bp
Accession: NZ_CP035771 Location: 1..88752 Organism: Escherichia coli O145 strain RM8988-C1 Replicon: plasmid pRM8988-C1
Accession: NZ_CP035771 Location: 1..88752 Organism: Escherichia coli O145 strain RM8988-C1 Replicon: plasmid pRM8988-C1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EW646_RS26805 () | 1..516 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| EW646_RS26810 () | 518..3514 | + | 2997 | WP_000217745.1 | Hemolysin, chromosomal | VF |
| EW646_RS26815 () | 3564..5684 | + | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| EW646_RS26820 () | 5688..7127 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| EW646_RS26825 () | 7194..7337 | + | 144 | Protein_4 | transcriptional regulator | - |
| EW646_RS26830 () | 7341..7532 | + | 192 | Protein_5 | lipid II-degrading bacteriocin | - |
| EW646_RS26835 () | 7540..7893 | - | 354 | WP_000864810.1 | colicin M immunity protein | - |
| EW646_RS26840 () | 8066..8848 | - | 783 | WP_001164205.1 | site-specific integrase | - |
| EW646_RS26845 () | 8850..9263 | - | 414 | WP_000465041.1 | hypothetical protein | - |
| EW646_RS26850 () | 9823..10053 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| EW646_RS26855 () | 10050..10466 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EW646_RS26860 () | 10628..11173 | - | 546 | WP_001165114.1 | hypothetical protein | - |
| EW646_RS26865 () | 11321..12534 | + | 1214 | WP_162829241.1 | IS3 family transposase IS629 | Transposase |
| EW646_RS26870 () | 12595..12849 | + | 255 | WP_097455692.1 | tyrosine-type recombinase/integrase | - |
| EW646_RS26875 () | 12903..13577 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| EW646_RS26880 () | 13574..13921 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| EW646_RS26885 () | 13941..15493 | + | 1553 | Protein_16 | IS66 family transposase ISSfl3 | Transposase |
| EW646_RS26890 () | 15527..15886 | - | 360 | Protein_17 | DUF1449 family protein | - |
| EW646_RS26895 () | 16153..16818 | - | 666 | WP_000154135.1 | hypothetical protein | - |
| EW646_RS26900 () | 16959..17600 | - | 642 | WP_000335839.1 | transcription termination factor NusG | - |
| EW646_RS26905 () | 18309..19340 | + | 1032 | WP_000907857.1 | replication initiation protein | - |
| EW646_RS26910 () | 20300..29800 | - | 9501 | WP_000581688.1 | Toxin B | VF |
| EW646_RS26915 () | 29915..30145 | - | 231 | WP_001443774.1 | transposase | - |
| EW646_RS26920 () | 30152..30560 | + | 409 | Protein_23 | IS3 family transposase | - |
| EW646_RS26925 () | 30627..32127 | - | 1501 | Protein_24 | IS66 family transposase | - |
| EW646_RS26930 () | 32139..33291 | - | 1153 | Protein_25 | IS3 family transposase | - |
| EW646_RS26935 () | 33362..33748 | - | 387 | Protein_26 | IS66 family transposase ISEc23 | Transposase |
| EW646_RS26940 () | 33835..33949 | + | 115 | Protein_27 | IS3 family transposase | - |
| EW646_RS26945 () | 34000..35509 | - | 1510 | Protein_28 | ISL3 family transposase | - |
| EW646_RS26950 () | 36129..37144 | - | 1016 | Protein_29 | IS91 family transposase ISEc37 | Transposase |
| EW646_RS26955 () | 37735..38922 | - | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| EW646_RS26960 () | 38922..39287 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| EW646_RS26965 () | 39688..40077 | - | 390 | Protein_32 | IS91 family transposase ISMno23 | Transposase |
| EW646_RS26970 () | 40111..41663 | - | 1553 | Protein_33 | IS66 family transposase ISSfl3 | Transposase |
| EW646_RS26975 () | 41683..42030 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| EW646_RS26980 () | 42027..42701 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| EW646_RS26985 () | 42755..42982 | - | 228 | WP_001341442.1 | transposase | - |
| EW646_RS26990 () | 43145..44122 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| EW646_RS26995 () | 44928..46141 | + | 1214 | WP_162908515.1 | IS3 family transposase IS629 | Transposase |
| EW646_RS27000 () | 46178..47551 | + | 1374 | Protein_39 | Catalase-peroxidase | VF |
| EW646_RS27005 () | 47595..47984 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| EW646_RS27010 () | 48098..48865 | + | 768 | Protein_41 | IS3 family transposase | - |
| EW646_RS27015 () | 48945..49340 | - | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| EW646_RS27020 () | 49340..50299 | - | 960 | WP_000921957.1 | plasmid segregation protein ParM | - |
| EW646_RS27025 () | 50572..51474 | + | 903 | WP_077249722.1 | DUF1281 domain-containing protein | - |
| EW646_RS27030 () | 51471..51782 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| EW646_RS27035 () | 51858..52541 | + | 684 | WP_000086167.1 | DNA methylase | - |
| EW646_RS27040 () | 52541..52759 | + | 219 | WP_001443814.1 | hypothetical protein | - |
| EW646_RS27045 () | 52771..53205 | + | 435 | WP_000274418.1 | DUF1380 family protein | - |
| EW646_RS27050 () | 53250..53489 | + | 240 | Protein_49 | hypothetical protein | - |
| EW646_RS27055 () | 53484..53732 | + | 249 | Protein_50 | conjugation system SOS inhibitor PsiB | - |
| EW646_RS27060 () | 53729..54448 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| EW646_RS27065 () | 54445..55042 | + | 598 | Protein_52 | hypothetical protein | - |
| EW646_RS27070 () | 55504..56004 | + | 501 | WP_000117628.1 | antirestriction protein ArdA | - |
| EW646_RS27075 () | 56006..56626 | - | 621 | WP_162137195.1 | hypothetical protein | - |
| EW646_RS27080 () | 56732..57166 | + | 435 | WP_000218854.1 | hypothetical protein | - |
| EW646_RS27085 () | 57259..57525 | + | 267 | WP_001247865.1 | hypothetical protein | - |
| EW646_RS27090 () | 57590..58480 | + | 891 | WP_000038351.1 | Recombination-promoting nuclease RpnA | VF |
| EW646_RS27095 () | 58480..58725 | + | 246 | WP_012605149.1 | hypothetical protein | - |
| EW646_RS27100 () | 58756..59007 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| EW646_RS27105 () | 59066..59341 | - | 276 | WP_001431784.1 | hypothetical protein | - |
| EW646_RS27110 () | 59586..60434 | + | 849 | WP_001341408.1 | DUF4942 domain-containing protein | - |
| EW646_RS27115 () | 60520..60855 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| EW646_RS27120 () | 61087..61419 | + | 333 | WP_001291056.1 | hypothetical protein | - |
| EW646_RS27125 () | 61431..64151 | + | 2721 | WP_000991402.1 | Protein TraI | Relaxase |
| EW646_RS27130 () | 64372..64692 | - | 321 | WP_001341409.1 | hypothetical protein | - |
| EW646_RS27135 () | 64731..65419 | + | 689 | Protein_66 | IS3 family transposase IS600 | Transposase |
| EW646_RS27145 () | 66672..67085 | + | 414 | WP_136138333.1 | DUF1449 family protein | - |
| EW646_RS27155 () | 68530..68658 | - | 129 | Protein_70 | IS3 family transposase ISSfl10 | Transposase |
| EW646_RS27160 () | 69202..73104 | - | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| EW646_RS27165 () | 73547..73720 | - | 174 | Protein_72 | IS66 family transposase | - |
| EW646_RS27170 () | 73782..73994 | + | 213 | Protein_73 | IS3 family transposase ISSfl10 | Transposase |
| EW646_RS27175 () | 74042..74461 | - | 420 | WP_136139077.1 | DUF1449 family protein | - |
| EW646_RS27180 () | 74392..75066 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| EW646_RS27185 () | 75063..75410 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| EW646_RS27190 () | 75430..76982 | + | 1553 | Protein_77 | IS66 family transposase ISSfl3 | Transposase |
| EW646_RS27195 () | 77261..78448 | - | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| EW646_RS27200 () | 78448..78813 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| EW646_RS27205 () | 79050..79397 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| EW646_RS27210 () | 79447..80985 | + | 1539 | WP_012917688.1 | IS66 family transposase ISEc8 | Transposase |
| EW646_RS27215 () | 81048..81236 | - | 189 | Protein_82 | hypothetical protein | - |
| EW646_RS27220 () | 81289..82287 | - | 999 | WP_012680945.1 | Lipid A biosynthesis myristoyltransferase | VF |
| EW646_RS27225 () | 82361..84082 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| EW646_RS27230 () | 84176..85282 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| EW646_RS27235 () | 85282..86103 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| EW646_RS27240 () | 87578..88233 | + | 656 | Protein_87 | IS3 family transposase IS629 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|