MGE detailed information
MGE type: Genomic_island MGE length: 48719 bp
Accession: NZ_CP035720 Location: 3275202..3323920 Organism: Escherichia coli strain U15A Replicon: chromosome
Accession: NZ_CP035720 Location: 3275202..3323920 Organism: Escherichia coli strain U15A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U15A_RS26000 () | 3270875..3271018 | - | 144 | WP_011076574.1 | hypothetical protein | - |
| U15A_RS16295 () | 3271268..3275155 | + | 3888 | WP_001034083.1 | serine protease autotransporter toxin Sat | - |
| U15A_RS16300 () | 3275427..3275687 | + | 261 | Protein_3137 | IS3 family transposase ISSfl10 | Transposase |
| U15A_RS16305 () | 3275752..3276903 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| U15A_RS16310 () | 3276916..3277806 | + | 891 | Protein_3139 | IS3 family transposase ISSd1 | Transposase |
| U15A_RS16315 () | 3277851..3278273 | + | 423 | Protein_3140 | hypothetical protein | - |
| U15A_RS16320 () | 3278489..3280102 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| U15A_RS16325 () | 3280133..3280483 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| U15A_RS16330 () | 3280480..3280905 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| U15A_RS16340 () | 3281229..3282761 | + | 1533 | Protein_3144 | IS3 family transposase | - |
| U15A_RS16345 () | 3282795..3283304 | - | 510 | Protein_3145 | L-lactate permease | - |
| U15A_RS16350 () | 3283324..3283646 | + | 323 | Protein_3146 | transposase | - |
| U15A_RS16360 () | 3284224..3284439 | - | 216 | WP_000266542.1 | hypothetical protein | - |
| U15A_RS16365 () | 3284443..3284802 | - | 360 | WP_001296382.1 | hypothetical protein | - |
| U15A_RS16375 () | 3285093..3285335 | - | 243 | WP_001296383.1 | hypothetical protein | - |
| U15A_RS16380 () | 3285820..3285979 | + | 160 | Protein_3150 | transposase domain-containing protein | - |
| U15A_RS16385 () | 3286197..3288287 | - | 2091 | WP_001223344.1 | bifunctional siderophore receptor/adhesin Iha | - |
| U15A_RS16405 () | 3290167..3291153 | - | 987 | WP_000274668.1 | hypothetical protein | - |
| U15A_RS16410 () | 3291253..3291987 | + | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| U15A_RS16415 () | 3292023..3292958 | - | 936 | WP_001305022.1 | alpha/beta hydrolase | - |
| U15A_RS16420 () | 3293008..3294117 | - | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| U15A_RS16425 () | 3294130..3294840 | - | 711 | WP_001296386.1 | N-acetylneuraminic acid channel protein | - |
| U15A_RS16430 () | 3294886..3295716 | - | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| U15A_RS16435 () | 3295720..3297192 | - | 1473 | WP_000376547.1 | MFS transporter | - |
| U15A_RS16440 () | 3297241..3298116 | - | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| U15A_RS16445 () | 3298150..3299067 | - | 918 | WP_001149834.1 | N-acetylneuraminate lyase | - |
| U15A_RS16450 () | 3299219..3299356 | + | 138 | WP_085949591.1 | transposase domain-containing protein | - |
| U15A_RS16460 () | 3299728..3300153 | + | 426 | WP_000435655.1 | IS66 family transposase IS682 | Transposase |
| U15A_RS16465 () | 3300150..3300500 | + | 351 | WP_000624646.1 | IS66 family transposase IS682 | Transposase |
| U15A_RS16470 () | 3300531..3301628 | + | 1098 | Protein_3165 | IS66 family transposase IS682 | Transposase |
| U15A_RS16475 () | 3301628..3303166 | + | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| U15A_RS16480 () | 3303205..3303390 | - | 186 | Protein_3167 | zinc-ribbon domain-containing protein | - |
| U15A_RS16485 () | 3303387..3303770 | - | 384 | WP_000271011.1 | hypothetical protein | - |
| U15A_RS16490 () | 3303937..3304506 | - | 570 | WP_000221563.1 | inovirus Gp2 family protein | - |
| U15A_RS16505 () | 3305235..3305384 | - | 150 | WP_071528377.1 | hemolysin activation protein | - |
| U15A_RS16515 () | 3306332..3306538 | + | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| U15A_RS16520 () | 3306624..3307196 | + | 573 | WP_001296389.1 | hypothetical protein | - |
| U15A_RS16525 () | 3307317..3308807 | - | 1491 | WP_001305029.1 | DUF3987 domain-containing protein | - |
| U15A_RS16540 () | 3310139..3311011 | + | 873 | WP_001069668.1 | GTPase family protein | - |
| U15A_RS16545 () | 3311345..3314467 | + | 3123 | WP_000820373.1 | autotransporter adhesin Ag43 | - |
| U15A_RS16550 () | 3314562..3315689 | + | 1128 | Protein_3176 | hypothetical protein | - |
| U15A_RS16555 () | 3315765..3316220 | + | 456 | WP_000581502.1 | hypothetical protein | - |
| U15A_RS16560 () | 3316299..3316532 | + | 234 | WP_000902034.1 | DUF905 family protein | - |
| U15A_RS16570 () | 3316633..3317451 | + | 819 | WP_001234620.1 | DUF945 domain-containing protein | - |
| U15A_RS16575 () | 3317506..3317991 | + | 486 | WP_000849565.1 | antirestriction protein | - |
| U15A_RS16580 () | 3318007..3318483 | + | 477 | WP_001186726.1 | RadC family protein | - |
| U15A_RS16585 () | 3318546..3318767 | + | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| U15A_RS16590 () | 3318786..3319430 | + | 645 | WP_000094916.1 | hypothetical protein | - |
| U15A_RS16595 () | 3319480..3319848 | + | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| U15A_RS16600 () | 3319937..3320314 | + | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| U15A_RS16605 () | 3320311..3320799 | + | 489 | WP_000761699.1 | hypothetical protein | - |
| U15A_RS16610 () | 3320816..3321013 | + | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| U15A_RS16615 () | 3321098..3321943 | + | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| U15A_RS16620 () | 3322012..3322407 | + | 396 | WP_000208384.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| U15A_RS16625 () | 3322400..3323333 | + | 934 | Protein_3190 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| U15A_RS26005 () | 3323765..3323920 | + | 156 | WP_000729638.1 | IS110 family transposase ISEc32 | Transposase |
| U15A_RS16630 () | 3324731..3325714 | + | 984 | WP_001298261.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| U15A_RS16635 () | 3325786..3326934 | + | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
| U15A_RS16640 () | 3326958..3328634 | + | 1677 | WP_001554264.1 | polysialic acid transporter KpsD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|