MGE detailed information
MGE type: Genomic_island MGE length: 64963 bp
Accession: NZ_CP035477 Location: 3273665..3338627 Organism: Escherichia coli strain U13A Replicon: chromosome
Accession: NZ_CP035477 Location: 3273665..3338627 Organism: Escherichia coli strain U13A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U13A_RS26955 () | 3269338..3269481 | - | 144 | WP_011076574.1 | hypothetical protein | - |
| U13A_RS16285 () | 3269731..3273618 | + | 3888 | WP_001034083.1 | serine protease autotransporter toxin Sat | - |
| U13A_RS16290 () | 3273890..3274150 | + | 261 | Protein_3133 | IS3 family transposase ISSfl10 | Transposase |
| U13A_RS16295 () | 3274215..3275366 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| U13A_RS16300 () | 3275379..3276269 | + | 891 | Protein_3135 | IS3 family transposase ISSd1 | Transposase |
| U13A_RS16305 () | 3276314..3276736 | + | 423 | Protein_3136 | hypothetical protein | - |
| U13A_RS16310 () | 3276952..3278554 | - | 1603 | Protein_3137 | IS66 family transposase ISEc23 | Transposase |
| U13A_RS16315 () | 3278585..3278935 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| U13A_RS16320 () | 3278932..3279357 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| U13A_RS16330 () | 3279681..3281213 | + | 1533 | Protein_3140 | IS3 family transposase | - |
| U13A_RS16335 () | 3281247..3281756 | - | 510 | Protein_3141 | L-lactate permease | - |
| U13A_RS16340 () | 3281776..3282098 | + | 323 | Protein_3142 | transposase | - |
| U13A_RS16350 () | 3282676..3282891 | - | 216 | WP_000266542.1 | hypothetical protein | - |
| U13A_RS16355 () | 3282895..3283254 | - | 360 | WP_001296382.1 | hypothetical protein | - |
| U13A_RS16365 () | 3283545..3283787 | - | 243 | WP_001296383.1 | hypothetical protein | - |
| U13A_RS16370 () | 3284272..3284431 | + | 160 | Protein_3146 | transposase domain-containing protein | - |
| U13A_RS16375 () | 3284649..3286739 | - | 2091 | WP_001223344.1 | bifunctional siderophore receptor/adhesin Iha | - |
| U13A_RS16390 () | 3287239..3288463 | - | 1225 | Protein_3148 | IS3 family transposase IS2 | Transposase |
| U13A_RS16395 () | 3288615..3289601 | - | 987 | WP_000274668.1 | hypothetical protein | - |
| U13A_RS16400 () | 3289701..3290435 | + | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| U13A_RS16405 () | 3290471..3291406 | - | 936 | WP_001305022.1 | alpha/beta hydrolase | - |
| U13A_RS16410 () | 3291456..3292565 | - | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| U13A_RS16415 () | 3292578..3293288 | - | 711 | WP_001296386.1 | N-acetylneuraminic acid channel protein | - |
| U13A_RS16420 () | 3293334..3294164 | - | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| U13A_RS16425 () | 3294168..3295640 | - | 1473 | WP_000376547.1 | MFS transporter | - |
| U13A_RS16430 () | 3295689..3296564 | - | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| U13A_RS16435 () | 3296598..3297515 | - | 918 | WP_001149834.1 | N-acetylneuraminate lyase | - |
| U13A_RS16440 () | 3297667..3297804 | + | 138 | WP_085949591.1 | transposase domain-containing protein | - |
| U13A_RS16450 () | 3298176..3298601 | + | 426 | WP_000435655.1 | IS66 family transposase IS682 | Transposase |
| U13A_RS16455 () | 3298598..3298948 | + | 351 | WP_000624646.1 | IS66 family transposase IS682 | Transposase |
| U13A_RS16460 () | 3298979..3300076 | + | 1098 | Protein_3161 | IS66 family transposase IS682 | Transposase |
| U13A_RS16465 () | 3300076..3301614 | + | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| U13A_RS16470 () | 3301653..3301838 | - | 186 | Protein_3163 | zinc-ribbon domain-containing protein | - |
| U13A_RS16475 () | 3301835..3302218 | - | 384 | WP_000271011.1 | hypothetical protein | - |
| U13A_RS16480 () | 3302385..3302954 | - | 570 | WP_000221563.1 | inovirus Gp2 family protein | - |
| U13A_RS16485 () | 3303153..3303350 | + | 198 | WP_001547002.1 | hypothetical protein | - |
| U13A_RS16495 () | 3303683..3303832 | - | 150 | WP_071528377.1 | hemolysin activation protein | - |
| U13A_RS16505 () | 3304780..3304986 | + | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| U13A_RS16510 () | 3305072..3305644 | + | 573 | WP_001296389.1 | hypothetical protein | - |
| U13A_RS16515 () | 3305765..3307255 | - | 1491 | WP_001305029.1 | DUF3987 domain-containing protein | - |
| U13A_RS16530 () | 3308587..3309459 | + | 873 | WP_001069668.1 | GTPase family protein | - |
| U13A_RS16535 () | 3309793..3312915 | + | 3123 | WP_000820373.1 | autotransporter adhesin Ag43 | - |
| U13A_RS16540 () | 3313010..3314137 | + | 1128 | Protein_3173 | hypothetical protein | - |
| U13A_RS16545 () | 3314213..3314668 | + | 456 | WP_000581502.1 | hypothetical protein | - |
| U13A_RS16550 () | 3314747..3314980 | + | 234 | WP_000902034.1 | DUF905 family protein | - |
| U13A_RS16560 () | 3315081..3315899 | + | 819 | WP_001234620.1 | DUF945 domain-containing protein | - |
| U13A_RS16565 () | 3315954..3316439 | + | 486 | WP_000849565.1 | antirestriction protein | - |
| U13A_RS16570 () | 3316455..3316931 | + | 477 | WP_001186726.1 | RadC family protein | - |
| U13A_RS16575 () | 3316994..3317215 | + | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| U13A_RS16580 () | 3317234..3317878 | + | 645 | WP_000094916.1 | hypothetical protein | - |
| U13A_RS16585 () | 3317928..3318296 | + | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| U13A_RS16590 () | 3318385..3318762 | + | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| U13A_RS16595 () | 3318759..3319247 | + | 489 | WP_000761699.1 | hypothetical protein | - |
| U13A_RS16600 () | 3319264..3319461 | + | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| U13A_RS16605 () | 3319546..3320391 | + | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| U13A_RS16610 () | 3320460..3320855 | + | 396 | WP_000208384.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| U13A_RS16615 () | 3320848..3321781 | + | 934 | Protein_3187 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| U13A_RS26960 () | 3322213..3322368 | + | 156 | WP_000729638.1 | IS110 family transposase ISEc32 | Transposase |
| U13A_RS16620 () | 3323179..3324162 | + | 984 | WP_001298261.1 | hypothetical protein | VF |
| U13A_RS16625 () | 3324234..3325382 | + | 1149 | WP_000905920.1 | hypothetical protein | VF |
| U13A_RS16630 () | 3325406..3327082 | + | 1677 | WP_001554264.1 | hypothetical protein | VF |
| U13A_RS16635 () | 3327092..3327832 | + | 741 | WP_001554265.1 | hypothetical protein | VF |
| U13A_RS16640 () | 3327829..3329856 | + | 2028 | WP_001554266.1 | hypothetical protein | VF |
| U13A_RS16645 () | 3329891..3331093 | + | 1203 | WP_001554267.1 | hypothetical protein | VF |
| U13A_RS16650 () | 3331470..3332246 | + | 777 | WP_001533607.1 | hypothetical protein | VF |
| U13A_RS16655 () | 3332243..3332908 | + | 666 | WP_001554269.1 | hypothetical protein | VF |
| U13A_RS16660 () | 3332934..3336245 | + | 3312 | WP_001554270.1 | hypothetical protein | - |
| U13A_RS16665 () | 3336313..3337623 | - | 1311 | WP_129481417.1 | hypothetical protein | VF |
| U13A_RS16670 () | 3337827..3338524 | + | 698 | Protein_3199 | IS1 family transposase IS1R | Transposase |
| U13A_RS16680 () | 3338982..3341153 | - | 2172 | WP_001554275.1 | malate synthase G | - |
| U13A_RS16685 () | 3341175..3341579 | - | 405 | WP_000853256.1 | protein GlcG | - |
| U13A_RS16690 () | 3341584..3342807 | - | 1224 | WP_001194653.1 | glycolate oxidase subunit GlcF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|