MGE detailed information
MGE type: Genomic_island MGE length: 65750 bp
Accession: NZ_CP035476 Location: 3275219..3340968 Organism: Escherichia coli strain U12A Replicon: chromosome
Accession: NZ_CP035476 Location: 3275219..3340968 Organism: Escherichia coli strain U12A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U12A_RS27610 () | 3270892..3271035 | - | 144 | WP_011076574.1 | hypothetical protein | - |
| U12A_RS18820 () | 3271285..3275172 | + | 3888 | WP_001034083.1 | serine protease autotransporter toxin Sat | - |
| U12A_RS18825 () | 3275444..3275704 | + | 261 | Protein_3134 | IS3 family transposase ISSfl10 | Transposase |
| U12A_RS18830 () | 3275769..3276920 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| U12A_RS18835 () | 3276933..3277823 | + | 891 | Protein_3136 | IS3 family transposase ISSd1 | Transposase |
| U12A_RS18840 () | 3277868..3278290 | + | 423 | Protein_3137 | hypothetical protein | - |
| U12A_RS18845 () | 3278506..3280119 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| U12A_RS18850 () | 3280150..3280500 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| U12A_RS18855 () | 3280497..3280922 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| U12A_RS18865 () | 3281246..3282778 | + | 1533 | Protein_3141 | IS3 family transposase | - |
| U12A_RS18870 () | 3282812..3283321 | - | 510 | Protein_3142 | L-lactate permease | - |
| U12A_RS18875 () | 3283341..3283663 | + | 323 | Protein_3143 | transposase | - |
| U12A_RS18885 () | 3284241..3284456 | - | 216 | WP_000266542.1 | hypothetical protein | - |
| U12A_RS18890 () | 3284460..3284819 | - | 360 | WP_001296382.1 | hypothetical protein | - |
| U12A_RS18900 () | 3285110..3285352 | - | 243 | WP_001296383.1 | hypothetical protein | - |
| U12A_RS18905 () | 3285837..3285996 | + | 160 | Protein_3147 | transposase domain-containing protein | - |
| U12A_RS18910 () | 3286214..3288304 | - | 2091 | WP_001223344.1 | bifunctional siderophore receptor/adhesin Iha | - |
| U12A_RS18930 () | 3290184..3291170 | - | 987 | WP_000274668.1 | hypothetical protein | - |
| U12A_RS18935 () | 3291270..3292004 | + | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| U12A_RS18940 () | 3292040..3292975 | - | 936 | WP_001305022.1 | alpha/beta hydrolase | - |
| U12A_RS18945 () | 3293025..3294134 | - | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| U12A_RS18950 () | 3294147..3294857 | - | 711 | WP_001296386.1 | N-acetylneuraminic acid channel protein | - |
| U12A_RS18955 () | 3294903..3295733 | - | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| U12A_RS18960 () | 3295737..3297209 | - | 1473 | WP_000376547.1 | MFS transporter | - |
| U12A_RS18965 () | 3297258..3298133 | - | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| U12A_RS18970 () | 3298167..3299084 | - | 918 | WP_001149834.1 | N-acetylneuraminate lyase | - |
| U12A_RS18975 () | 3299236..3299373 | + | 138 | WP_085949591.1 | transposase domain-containing protein | - |
| U12A_RS18985 () | 3299745..3300170 | + | 426 | WP_000435655.1 | IS66 family transposase IS682 | Transposase |
| U12A_RS18990 () | 3300167..3300517 | + | 351 | WP_000624646.1 | IS66 family transposase IS682 | Transposase |
| U12A_RS18995 () | 3300548..3301645 | + | 1098 | Protein_3162 | IS66 family transposase IS682 | Transposase |
| U12A_RS19000 () | 3301645..3303183 | + | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| U12A_RS19005 () | 3303222..3303407 | - | 186 | Protein_3164 | zinc-ribbon domain-containing protein | - |
| U12A_RS19010 () | 3303404..3303787 | - | 384 | WP_000271011.1 | hypothetical protein | - |
| U12A_RS19015 () | 3303954..3304523 | - | 570 | WP_000221563.1 | inovirus Gp2 family protein | - |
| U12A_RS19020 () | 3304722..3304919 | + | 198 | WP_001547002.1 | hypothetical protein | - |
| U12A_RS19030 () | 3305252..3305401 | - | 150 | WP_071528377.1 | hemolysin activation protein | - |
| U12A_RS19040 () | 3306349..3306555 | + | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| U12A_RS19045 () | 3306641..3307213 | + | 573 | WP_001296389.1 | hypothetical protein | - |
| U12A_RS19050 () | 3307334..3308824 | - | 1491 | WP_001305029.1 | DUF3987 domain-containing protein | - |
| U12A_RS19065 () | 3310156..3311028 | + | 873 | WP_001069668.1 | GTPase family protein | - |
| U12A_RS19070 () | 3311362..3314484 | + | 3123 | WP_000820373.1 | autotransporter adhesin Ag43 | - |
| U12A_RS19075 () | 3314579..3315706 | + | 1128 | Protein_3174 | hypothetical protein | - |
| U12A_RS19080 () | 3315782..3316237 | + | 456 | WP_000581502.1 | hypothetical protein | - |
| U12A_RS19085 () | 3316316..3316549 | + | 234 | WP_000902034.1 | DUF905 family protein | - |
| U12A_RS19095 () | 3316650..3317468 | + | 819 | WP_001234620.1 | DUF945 domain-containing protein | - |
| U12A_RS19100 () | 3317523..3318008 | + | 486 | WP_000849565.1 | antirestriction protein | - |
| U12A_RS19105 () | 3318024..3318500 | + | 477 | WP_001186726.1 | RadC family protein | - |
| U12A_RS19110 () | 3318563..3318784 | + | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| U12A_RS19115 () | 3318803..3319447 | + | 645 | WP_000094916.1 | hypothetical protein | - |
| U12A_RS19120 () | 3319497..3319865 | + | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| U12A_RS19125 () | 3319954..3320331 | + | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| U12A_RS19130 () | 3320328..3320816 | + | 489 | WP_000761699.1 | hypothetical protein | - |
| U12A_RS19135 () | 3320833..3321030 | + | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| U12A_RS19140 () | 3321115..3321960 | + | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| U12A_RS19145 () | 3322029..3322424 | + | 396 | WP_000208384.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| U12A_RS19150 () | 3322417..3323350 | + | 934 | Protein_3188 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| U12A_RS27615 () | 3323782..3323937 | + | 156 | WP_000729638.1 | IS110 family transposase ISEc32 | Transposase |
| U12A_RS19155 () | 3324748..3325731 | + | 984 | WP_001298261.1 | GTP cyclohydrolase 1 | VF |
| U12A_RS19160 () | 3325803..3326951 | + | 1149 | WP_000905920.1 | S-formylglutathione hydrolase YeiG | VF |
| U12A_RS19165 () | 3326975..3328651 | + | 1677 | WP_001554264.1 | Colicin I receptor | VF |
| U12A_RS19170 () | 3328661..3329401 | + | 741 | WP_001554265.1 | Lysine-specific permease | VF |
| U12A_RS19175 () | 3329398..3331425 | + | 2028 | WP_001554266.1 | HTH-type transcriptional regulator CysL | VF |
| U12A_RS19180 () | 3331460..3332662 | + | 1203 | WP_001554267.1 | hypothetical protein | VF |
| U12A_RS19185 () | 3333039..3333815 | + | 777 | WP_001533607.1 | Endonuclease 4 | VF |
| U12A_RS19190 () | 3333812..3334477 | + | 666 | WP_001554269.1 | Pseudouridine kinase | VF |
| U12A_RS19195 () | 3334503..3336263 | + | 1761 | Protein_3198 | hypothetical protein | - |
| U12A_RS19200 () | 3336280..3336977 | - | 698 | Protein_3199 | IS1 family transposase | - |
| U12A_RS19205 () | 3337032..3338591 | + | 1560 | Protein_3200 | Putative pseudouridine transporter | VF |
| U12A_RS19210 () | 3338659..3339964 | - | 1306 | Protein_3201 | CatB-related O-acetyltransferase | - |
| U12A_RS19215 () | 3340168..3340865 | + | 698 | Protein_3202 | IS1 family transposase IS1R | Transposase |
| U12A_RS19225 () | 3341323..3343494 | - | 2172 | WP_001554275.1 | malate synthase G | - |
| U12A_RS19230 () | 3343516..3343920 | - | 405 | WP_000853256.1 | protein GlcG | - |
| U12A_RS19235 () | 3343925..3345148 | - | 1224 | WP_001194653.1 | glycolate oxidase subunit GlcF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|