MGE detailed information
MGE type: Genomic_island MGE length: 48156 bp
Accession: NZ_CP035476 Location: 316123..364278 Organism: Escherichia coli strain U12A Replicon: chromosome
Accession: NZ_CP035476 Location: 316123..364278 Organism: Escherichia coli strain U12A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U12A_RS04015 () | 312388..313491 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| U12A_RS04020 () | 313503..314756 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| U12A_RS04030 () | 314961..315164 | - | 204 | Protein_293 | integrase | - |
| U12A_RS04040 () | 315310..315780 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| U12A_RS27720 () | 315758..315943 | - | 186 | WP_101918754.1 | ash family protein | - |
| U12A_RS04050 () | 316123..317370 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| U12A_RS04055 () | 317360..318997 | - | 1638 | WP_000229741.1 | type I restriction-modification system subunit M | - |
| U12A_RS04060 () | 318991..322089 | - | 3099 | WP_000673070.1 | type I restriction endonuclease subunit R | - |
| U12A_RS04065 () | 322373..323155 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| U12A_RS04070 () | 323142..324062 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| U12A_RS04075 () | 324227..325546 | - | 1320 | Protein_301 | hypothetical protein ; Integrase | Integrase |
| U12A_RS27530 () | 325773..325931 | - | 159 | Protein_302 | integrase | - |
| U12A_RS04085 () | 325980..326165 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| U12A_RS04090 () | 326380..326994 | + | 615 | WP_001019923.1 | YagU family protein | - |
| U12A_RS04095 () | 327068..327231 | + | 164 | Protein_305 | tail fiber assembly protein | - |
| U12A_RS04100 () | 327243..327572 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| U12A_RS04105 () | 327879..328589 | - | 711 | WP_001295798.1 | hypothetical protein | VF |
| U12A_RS04110 () | 328558..330201 | - | 1644 | WP_001265646.1 | hypothetical protein | VF |
| U12A_RS04115 () | 330191..332716 | - | 2526 | WP_001131109.1 | 2,3-diketo-L-gulonate reductase | VF |
| U12A_RS04120 () | 332742..333410 | - | 669 | WP_000716404.1 | DNA-binding transcriptional repressor YiaJ | VF |
| U12A_RS04125 () | 333467..334054 | - | 588 | WP_000730982.1 | Hydrogenase-4 component A | VF |
| U12A_RS04130 () | 334129..334671 | - | 543 | WP_000389022.1 | Valine--pyruvate aminotransferase | VF |
| U12A_RS04140 () | 335495..335685 | + | 191 | Protein_313 | hypothetical protein | - |
| U12A_RS04145 () | 335755..335895 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| U12A_RS04150 () | 335895..336158 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| U12A_RS04155 () | 336523..336624 | - | 102 | WP_000662258.1 | hypothetical protein | - |
| U12A_RS04160 () | 337097..338239 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| U12A_RS04165 () | 338412..339332 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| U12A_RS04170 () | 339489..340415 | + | 927 | WP_001524125.1 | Xylose transport system permease protein XylH | VF |
| U12A_RS04175 () | 340615..341508 | + | 894 | WP_000910713.1 | Xylose import ATP-binding protein XylG | VF |
| U12A_RS04180 () | 341539..342528 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| U12A_RS04185 () | 342555..343406 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| U12A_RS04190 () | 343972..348219 | + | 4248 | WP_000092552.1 | Xylose isomerase | VF |
| U12A_RS04200 () | 348344..349201 | - | 858 | WP_000620995.1 | Xylulose kinase | VF |
| U12A_RS04205 () | 349449..350318 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| U12A_RS04210 () | 350478..351071 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| U12A_RS04215 () | 351083..351319 | - | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| U12A_RS04220 () | 351428..352753 | - | 1326 | WP_001046304.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| U12A_RS04225 () | 352980..353834 | + | 855 | WP_045151309.1 | DNA-binding transcriptional regulator RclR | - |
| U12A_RS04230 () | 354360..355079 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| U12A_RS04235 () | 355090..356517 | + | 1428 | WP_001295802.1 | iron-sulfur cluster-binding protein | - |
| U12A_RS04240 () | 356510..357205 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| U12A_RS04245 () | 357448..358116 | - | 669 | WP_001005267.1 | membrane protein | - |
| U12A_RS04250 () | 358300..359493 | - | 1194 | WP_072017408.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| U12A_RS04255 () | 359515..360591 | - | 1077 | Protein_335 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| U12A_RS04260 () | 360633..361394 | - | 762 | WP_001213045.1 | protein HyxA | - |
| U12A_RS04265 () | 361548..362342 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| U12A_RS04270 () | 362672..363235 | - | 564 | WP_001295805.1 | Cytoplasmic trehalase | VF |
| U12A_RS04280 () | 364320..365990 | - | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| U12A_RS04285 () | 366004..367476 | - | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| U12A_RS04290 () | 367490..368077 | - | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|