MGE detailed information
MGE type: Genomic_island MGE length: 16977 bp
Accession: NZ_CP035476 Location: 1679002..1695978 Organism: Escherichia coli strain U12A Replicon: chromosome
Accession: NZ_CP035476 Location: 1679002..1695978 Organism: Escherichia coli strain U12A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U12A_RS10990 () | 1674099..1675418 | - | 1320 | WP_000350365.1 | glycoside hydrolase family 10 protein | - |
| U12A_RS10995 () | 1675549..1677084 | - | 1536 | WP_000246011.1 | acid resistance gamma-aminobutyrate antiporter GadC | - |
| U12A_RS11000 () | 1677240..1678640 | - | 1401 | WP_000358930.1 | glutamate decarboxylase | - |
| U12A_RS11010 () | 1679002..1679913 | - | 912 | Protein_1647 | insulinase family protein | - |
| U12A_RS11015 () | 1679925..1681082 | - | 1158 | WP_001296071.1 | anaerobic sulfatase maturase | - |
| U12A_RS11020 () | 1681134..1682816 | - | 1683 | WP_001296072.1 | sulfatase | - |
| U12A_RS11025 () | 1683218..1683979 | - | 762 | WP_000060456.1 | acid stress response transcriptional regulator YdeO | - |
| U12A_RS11030 () | 1684054..1684251 | - | 198 | WP_000543392.1 | two-component system connector SafA | - |
| U12A_RS11035 () | 1684499..1686778 | - | 2280 | WP_000726721.1 | acid resistance putative oxidoreductase YdeP | - |
| U12A_RS11040 () | 1687117..1688031 | - | 915 | WP_000520593.1 | Integration host factor subunit beta | VF |
| U12A_RS11045 () | 1688091..1688594 | - | 504 | WP_000825466.1 | hypothetical protein | VF |
| U12A_RS11050 () | 1688607..1689137 | - | 531 | WP_000876789.1 | ComE operon protein 3 | VF |
| U12A_RS11055 () | 1689151..1691802 | - | 2652 | WP_001531687.1 | hypothetical protein | VF |
| U12A_RS11060 () | 1691844..1692554 | - | 711 | WP_001195176.1 | ComE operon protein 3 | VF |
| U12A_RS11065 () | 1692916..1693479 | - | 564 | WP_001296074.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| U12A_RS11080 () | 1694390..1695712 | - | 1323 | WP_001125411.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| U12A_RS11085 () | 1695712..1695978 | - | 267 | WP_001296076.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| U12A_RS11090 () | 1696286..1697044 | + | 759 | WP_001286537.1 | trans-aconitate 2-methyltransferase | - |
| U12A_RS11095 () | 1697048..1697962 | - | 915 | WP_001296077.1 | bestrophin family protein | - |
| U12A_RS11100 () | 1698159..1699610 | - | 1452 | WP_000854638.1 | tagaturonate reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|