MGE detailed information
MGE type: IScluster/Tn MGE length: 16542 bp
Accession: NZ_CP034935 Location: 124257..140798 Organism: Shigella dysenteriae strain 79-8006 Replicon: chromosome
Accession: NZ_CP034935 Location: 124257..140798 Organism: Shigella dysenteriae strain 79-8006 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EPD85_RS01350 () | 119956..122016 | + | 2061 | WP_000936901.1 | oligopeptidase B | - |
| EPD85_RS01355 () | 122013..122675 | - | 663 | WP_000944260.1 | exodeoxyribonuclease X | - |
| EPD85_RS01360 () | 122699..123355 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| EPD85_RS01365 () | 123457..123687 | - | 231 | WP_000916761.1 | DNA polymerase III subunit theta | - |
| EPD85_RS01370 () | 123826..124200 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| EPD85_RS01380 () | 125591..126412 | + | 822 | WP_046891729.1 | copper homeostasis membrane protein CopD | - |
| EPD85_RS01385 () | 126425..126766 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - | 126794..127028 | - | 235 | - | - | Antitoxin Detail |
| - | 126924..127027 | + | 104 | - | - | Toxin Detail |
| EPD85_RS01390 () | 127159..127686 | - | 528 | Protein_147 | hypothetical protein ; Integrase | Integrase |
| EPD85_RS01400 () | 127752..128908 | + | 1157 | WP_129592867.1 | IS3 family transposase IS600 | Transposase |
| EPD85_RS01405 () | 128951..129392 | - | 442 | Protein_149 | integrase | - |
| EPD85_RS01410 () | 129464..130632 | + | 1169 | WP_094112582.1 | IS3 family transposase ISLad1 | Transposase |
| EPD85_RS01415 () | 130641..130990 | - | 350 | Protein_151 | IS3 family transposase ISSd1 | Transposase |
| EPD85_RS01420 () | 131096..131476 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| EPD85_RS01425 () | 131473..131820 | + | 348 | WP_046891812.1 | IS66 family transposase ISKpn24 | Transposase |
| EPD85_RS01430 () | 131869..133407 | + | 1539 | WP_000099181.1 | IS66 family transposase ISEc22 | Transposase |
| EPD85_RS01435 () | 133564..133860 | - | 297 | WP_001277359.1 | host-nuclease inhibitor Gam family protein | - |
| EPD85_RS01440 () | 133838..135778 | - | 1941 | WP_005029490.1 | exodeoxyribonuclease VIII | - |
| EPD85_RS01445 () | 135878..136152 | - | 275 | Protein_157 | hypothetical protein | - |
| EPD85_RS01450 () | 136427..137554 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| EPD85_RS01455 () | 137788..139001 | + | 1214 | WP_134806767.1 | IS3 family transposase IS629 | Transposase |
| EPD85_RS01460 () | 139222..139602 | + | 381 | WP_001171522.1 | IS66 family transposase ISEc8 | Transposase |
| EPD85_RS01465 () | 139599..139946 | + | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| EPD85_RS01470 () | 139995..140750 | + | 756 | Protein_162 | IS66 family transposase ISEc22 | Transposase |
| EPD85_RS01475 () | 140728..141949 | + | 1222 | Protein_163 | prophage tail fiber N-terminal domain-containing protein | - |
| EPD85_RS01480 () | 141900..142523 | + | 624 | WP_024259614.1 | DUF4376 domain-containing protein | - |
| EPD85_RS01485 () | 142703..144409 | - | 1707 | WP_024259619.1 | T3SS effector E3 ubiquitin-protein ligase IpaH3 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|