MGE detailed information
MGE type: IScluster/Tn MGE length: 20489 bp
Accession: NZ_CP034933 Location: 71890..92378 Organism: Shigella flexneri strain 2013C-3749 Replicon: plasmid p2013C-3749-2
Accession: NZ_CP034933 Location: 71890..92378 Organism: Shigella flexneri strain 2013C-3749 Replicon: plasmid p2013C-3749-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EPD86_RS24335 | 67038..67226 | - | 189 | WP_000957853.1 | hypothetical protein | - |
| EPD86_RS24340 | 67628..71721 | + | 4094 | Protein_75 | serine protease autotransporter toxin SepA | - |
| EPD86_RS24345 | 71890..72504 | - | 615 | Protein_76 | IS21 family transposase ISEc10 | Transposase |
| EPD86_RS24350 | 72536..72946 | - | 411 | Protein_77 | IS66 family transposase ISEc47 | Transposase |
| EPD86_RS24355 | 72990..74199 | - | 1210 | Protein_78 | IS3 family transposase | - |
| EPD86_RS24360 | 74249..74868 | - | 620 | Protein_79 | IS1 family transposase IS1X2 | Transposase |
| EPD86_RS24365 | 75272..76726 | + | 1455 | WP_000701108.1 | hypothetical protein | VF |
| EPD86_RS24370 | 76875..77003 | - | 129 | Protein_81 | IS5 family transposase ISSfl7 | Transposase |
| EPD86_RS24375 | 77175..78383 | - | 1209 | WP_000198552.1 | IS91 family transposase ISSbo1 | Transposase |
| EPD86_RS24380 | 78364..78636 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| EPD86_RS24385 | 78908..79210 | + | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| EPD86_RS24390 | 79201..79683 | + | 483 | WP_000405245.1 | GNAT family N-acetyltransferase | Toxin Detail |
| EPD86_RS24395 | 79751..80274 | + | 524 | Protein_86 | IS3 family transposase ISSfl11 | Transposase |
| EPD86_RS24400 | 80317..81525 | - | 1209 | Protein_87 | IS3 family transposase | - |
| EPD86_RS24405 | 81577..83268 | - | 1692 | WP_000597733.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| EPD86_RS24410 | 83604..84800 | + | 1197 | WP_005085088.1 | IS110 family transposase ISSfl4 | Transposase |
| EPD86_RS24420 | 85948..86214 | - | 267 | WP_000957712.1 | hypothetical protein | VF |
| EPD86_RS24425 | 86396..86797 | - | 402 | Protein_92 | integrase core domain-containing protein | - |
| EPD86_RS24430 | 87226..88014 | + | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| EPD86_RS24435 | 88007..88366 | - | 360 | Protein_94 | IS21 family transposase IS100 | Transposase |
| EPD86_RS24440 | 88377..89131 | + | 755 | Protein_95 | IS3 family transposase IS150 | Transposase |
| EPD86_RS24450 | 90512..90700 | - | 189 | WP_000957853.1 | hypothetical protein | - |
| EPD86_RS24455 | 90816..91112 | + | 297 | Protein_98 | DDE-type integrase/transposase/recombinase | - |
| EPD86_RS24460 | 91169..92378 | + | 1210 | Protein_99 | IS3 family transposase | - |
| EPD86_RS24465 | 92415..92594 | + | 180 | Protein_100 | IS66 family transposase | - |
| EPD86_RS26040 | 92910..93248 | - | 339 | WP_227804374.1 | hypothetical protein | - |
| EPD86_RS24475 | 93170..94297 | + | 1128 | WP_014526552.1 | group II intron reverse transcriptase/maturase | - |
| EPD86_RS24480 | 94380..94559 | + | 180 | Protein_103 | transposase domain-containing protein | - |
| EPD86_RS24485 | 94586..95071 | - | 486 | WP_000003223.1 | IS110 family transposase | - |
| EPD86_RS24490 | 95327..96307 | - | 981 | WP_000431558.1 | ParB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|