MGE detailed information
MGE type: IScluster/Tn MGE length: 22125 bp
Accession: NZ_CP034933 Location: 160049..182173 Organism: Shigella flexneri strain 2013C-3749 Replicon: plasmid p2013C-3749-2
Accession: NZ_CP034933 Location: 160049..182173 Organism: Shigella flexneri strain 2013C-3749 Replicon: plasmid p2013C-3749-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EPD86_RS24890 | 155388..156230 | - | 843 | WP_000931197.1 | polysaccharide deacetylase family protein | - |
| EPD86_RS24900 | 156713..159625 | + | 2913 | WP_162284499.1 | ankyrin repeat domain-containing protein | - |
| EPD86_RS24905 | 159655..159979 | - | 325 | Protein_184 | IS3 family transposase | - |
| EPD86_RS25510 | 159977..160168 | + | 192 | Protein_185 | IS66 family transposase ISCro1 | Transposase |
| EPD86_RS26075 | 160182..160262 | - | 81 | Protein_186 | hypothetical protein | - |
| EPD86_RS24910 | 160303..161512 | - | 1210 | Protein_187 | IS3 family transposase | - |
| EPD86_RS24915 | 161569..162837 | - | 1269 | Protein_188 | IS4 family transposase IS4 | Transposase |
| EPD86_RS25515 | 162900..163166 | - | 267 | Protein_189 | IS66 family transposase ISCro1 | Transposase |
| EPD86_RS24920 | 163523..164113 | - | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| EPD86_RS26080 | 164196..164365 | - | 170 | Protein_191 | type II toxin-antitoxin system toxin YacB | - |
| EPD86_RS24925 | 164365..164634 | - | 270 | Protein_192 | type II toxin-antitoxin system antitoxin YacA | - |
| EPD86_RS24930 | 164842..166479 | - | 1638 | WP_000936806.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| EPD86_RS24940 | 166872..167177 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| EPD86_RS24945 | 167179..167397 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| EPD86_RS24950 | 167933..168886 | - | 954 | Protein_196 | IS66 family transposase ISEc49 | Transposase |
| EPD86_RS24955 | 168942..169639 | + | 698 | WP_227804301.1 | IS1 family transposase IS1X2 | Transposase |
| EPD86_RS24965 | 169865..170140 | - | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EPD86_RS24970 | 170140..170424 | - | 285 | WP_011114774.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| EPD86_RS24975 | 170876..171127 | + | 252 | WP_015683204.1 | transporter | - |
| EPD86_RS24980 | 171177..171386 | + | 210 | Protein_201 | peptidoglycan-binding protein | - |
| EPD86_RS24985 | 171486..171671 | - | 186 | Protein_202 | IS21 family transposase IS100 | Transposase |
| EPD86_RS24990 | 171860..173461 | - | 1602 | WP_011110603.1 | IS66 family transposase ISSfl3 | Transposase |
| EPD86_RS24995 | 173481..173828 | - | 348 | WP_000631708.1 | IS66 family transposase ISSfl3 | Transposase |
| EPD86_RS25000 | 173825..174499 | - | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| EPD86_RS25005 | 174579..175621 | - | 1043 | Protein_206 | IS3 family transposase IS2 | Transposase |
| EPD86_RS25010 | 175709..175978 | - | 270 | Protein_207 | IS3 family transposase ISEc48 | Transposase |
| EPD86_RS25015 | 176093..176731 | - | 639 | WP_000607008.1 | hypothetical protein | VF |
| EPD86_RS25020 | 176890..177360 | - | 471 | Protein_209 | IS1 family transposase IS1N | Transposase |
| EPD86_RS25025 | 177559..178233 | + | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| EPD86_RS25030 | 178230..178580 | + | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| EPD86_RS25035 | 178577..179128 | + | 552 | Protein_212 | IS66 family transposase ISSfl3 | Transposase |
| EPD86_RS25045 | 179186..180342 | + | 1157 | WP_094081569.1 | IS3 family transposase IS600 | Transposase |
| EPD86_RS25050 | 180384..181445 | + | 1062 | Protein_214 | IS66 family transposase ISSfl3 | Transposase |
| EPD86_RS25055 | 181454..182173 | + | 720 | Protein_215 | IS110 family transposase ISSfl8 | Transposase |
| EPD86_RS25060 | 182512..183282 | - | 771 | WP_001006196.1 | hypothetical protein | - |
| EPD86_RS25065 | 183327..183813 | - | 487 | Protein_217 | DUF1380 domain-containing protein | - |
| EPD86_RS25070 | 183773..183994 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| EPD86_RS25075 | 183995..184678 | - | 684 | WP_000086135.1 | DNA methylase | - |
| EPD86_RS25080 | 184742..185053 | - | 312 | WP_011114770.1 | hypothetical protein | - |
| EPD86_RS25085 | 185050..185952 | - | 903 | WP_015683198.1 | DUF1281 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|