MGE detailed information
MGE type: Genomic_island MGE length: 21228 bp
Accession: NZ_CP034803 Location: 2376392..2397619 Organism: Escherichia coli strain 2009C-3554 Replicon: chromosome
Accession: NZ_CP034803 Location: 2376392..2397619 Organism: Escherichia coli strain 2009C-3554 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A0I22_RS12605 () | 2372118..2372660 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| A0I22_RS12610 () | 2372953..2375103 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| A0I22_RS12615 () | 2375153..2375356 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| A0I22_RS12620 () | 2375367..2376323 | + | 957 | WP_001297640.1 | GTPase | - |
| A0I22_RS12625 () | 2376392..2377750 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| A0I22_RS12630 () | 2377759..2378043 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| A0I22_RS12635 () | 2378321..2380753 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| A0I22_RS12640 () | 2380820..2382289 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| A0I22_RS12645 () | 2382289..2384043 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 2384193..2384269 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 2384193..2384269 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 2384193..2384269 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 2384193..2384269 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 2384193..2384269 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 2384193..2384269 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 2384193..2384269 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 2384193..2384269 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| A0I22_RS12650 () | 2384264..2384605 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| A0I22_RS12655 () | 2384652..2385815 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| A0I22_RS12660 () | 2385863..2386744 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| A0I22_RS12665 () | 2386841..2387005 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| A0I22_RS12670 () | 2387182..2388594 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| A0I22_RS29305 () | 2388837..2389037 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| A0I22_RS12675 () | 2389042..2389794 | - | 753 | Protein_2397 | putative lipid II flippase MurJ | VF |
| A0I22_RS12680 () | 2390261..2391493 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| A0I22_RS12685 () | 2391534..2392805 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| A0I22_RS12690 () | 2392921..2394072 | + | 1152 | WP_001302771.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| A0I22_RS12695 () | 2394082..2394849 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| A0I22_RS12700 () | 2394846..2395112 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| A0I22_RS12705 () | 2395424..2397619 | + | 2196 | WP_000535069.1 | hypothetical protein | VF |
| A0I22_RS12715 () | 2397885..2398727 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| A0I22_RS12720 () | 2398795..2399973 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |