MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94606 bp
Accession: NZ_CP034800 Location: 1..94606 Organism: Escherichia coli strain 2009C-4687 Replicon: plasmid p2009C-4687
Accession: NZ_CP034800 Location: 1..94606 Organism: Escherichia coli strain 2009C-4687 Replicon: plasmid p2009C-4687
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A0I37_RS27995 () | 105..404 | + | 300 | WP_027868286.1 | type II toxin-antitoxin system toxin CcdB | - |
| A0I37_RS28000 () | 405..1211 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| A0I37_RS28015 () | 3223..3978 | + | 756 | WP_000852148.1 | replication initiation protein RepE | - |
| A0I37_RS28020 () | 4566..5732 | + | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| A0I37_RS28025 () | 5732..6703 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| A0I37_RS28040 () | 7398..8300 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| A0I37_RS28045 () | 8304..8609 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| A0I37_RS28050 () | 8686..9369 | + | 684 | WP_000085945.1 | DNA methylase | - |
| A0I37_RS28055 () | 9370..9591 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| A0I37_RS28060 () | 9485..10039 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| A0I37_RS28855 () | 10085..10861 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| A0I37_RS28075 () | 11402..11704 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| A0I37_RS28080 () | 11751..12173 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| A0I37_RS28085 () | 12170..12361 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| A0I37_RS28860 () | 12331..12840 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| A0I37_RS28100 () | 13357..13587 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| A0I37_RS28105 () | 13639..15000 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| A0I37_RS28110 () | 15047..15610 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| A0I37_RS28115 () | 15696..16145 | - | 450 | WP_001451816.1 | hypothetical protein | - |
| A0I37_RS28865 () | 16215..16421 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| A0I37_RS28125 () | 16447..16899 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| A0I37_RS28130 () | 16956..17189 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| A0I37_RS28135 () | 17255..19213 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| A0I37_RS28140 () | 19268..19702 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| A0I37_RS28145 () | 19699..20460 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 20429..20627 | + | 199 | NuclAT_0 | - | - |
| - () | 20429..20627 | + | 199 | NuclAT_0 | - | - |
| - () | 20429..20627 | + | 199 | NuclAT_0 | - | - |
| - () | 20429..20627 | + | 199 | NuclAT_0 | - | - |
| A0I37_RS28150 () | 20692..20850 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| A0I37_RS28155 () | 20984..23005 | + | 2022 | Protein_28 | relaxase/mobilization nuclease domain-containing protein | - |
| A0I37_RS28160 () | 23073..23504 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| A0I37_RS28170 () | 24169..24518 | - | 350 | Protein_30 | IS3 family transposase | - |
| A0I37_RS28175 () | 24612..24875 | + | 264 | Protein_31 | IS21 family transposase | - |
| A0I37_RS28180 () | 24915..25035 | + | 121 | Protein_32 | ATP-binding protein | - |
| A0I37_RS28185 () | 25032..25184 | + | 153 | Protein_33 | IS1 family transposase | - |
| A0I37_RS28190 () | 25291..34800 | + | 9510 | WP_000581721.1 | toxin B | - |
| A0I37_RS28195 () | 34874..35098 | + | 225 | Protein_35 | IS3 family transposase | - |
| A0I37_RS28200 () | 35166..35336 | - | 171 | Protein_36 | ATP-binding protein | - |
| A0I37_RS28205 () | 35343..35594 | - | 252 | Protein_37 | transposase | - |
| A0I37_RS28210 () | 35651..37039 | + | 1389 | Protein_38 | conjugative transfer relaxase/helicase TraI | - |
| A0I37_RS28215 () | 37059..37805 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| A0I37_RS28220 () | 37864..38724 | + | 861 | WP_000704522.1 | alpha/beta hydrolase | - |
| A0I37_RS28225 () | 38827..39387 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| A0I37_RS28230 () | 39520..39732 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| A0I37_RS28235 () | 39977..40438 | + | 462 | WP_001233856.1 | thermonuclease family protein | - |
| A0I37_RS28240 () | 40484..40693 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| A0I37_RS28245 () | 40731..41069 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| A0I37_RS28250 () | 41309..41563 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| A0I37_RS28260 () | 41799..41873 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| A0I37_RS28265 () | 41866..42723 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| A0I37_RS28280 () | 43635..43919 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| A0I37_RS28285 () | 43919..44194 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A0I37_RS28290 () | 44289..44495 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| A0I37_RS28295 () | 44595..44810 | - | 216 | Protein_52 | transposase | - |
| A0I37_RS28300 () | 44854..45420 | - | 567 | Protein_53 | IS3-like element IS600 family transposase | - |
| A0I37_RS28305 () | 45420..45836 | - | 417 | Protein_54 | IS91 family transposase | - |
| A0I37_RS28310 () | 45836..46021 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| A0I37_RS28315 () | 46198..48408 | + | 2211 | WP_000592771.1 | catalase/peroxidase KatP | - |
| A0I37_RS28320 () | 48452..48841 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| A0I37_RS28325 () | 48898..49886 | + | 989 | Protein_58 | IS3 family transposase | - |
| A0I37_RS28335 () | 50067..53969 | + | 3903 | WP_001034100.1 | serine protease autotransporter EspP | - |
| A0I37_RS28340 () | 54225..54706 | - | 482 | Protein_60 | IS1 family transposase | - |
| A0I37_RS28350 () | 56148..56969 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| A0I37_RS28355 () | 56969..58075 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| A0I37_RS28360 () | 58165..59886 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| A0I37_RS28365 () | 59960..60958 | + | 999 | WP_001302181.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| A0I37_RS28370 () | 61011..61199 | + | 189 | Protein_65 | hypothetical protein | - |
| A0I37_RS28375 () | 61326..61706 | + | 381 | WP_001171540.1 | IS66 family insertion sequence hypothetical protein | - |
| A0I37_RS28380 () | 61703..62050 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| A0I37_RS28385 () | 62100..63638 | + | 1539 | WP_000998042.1 | IS66-like element ISEc8 family transposase | - |
| A0I37_RS28390 () | 63753..63839 | - | 87 | Protein_69 | transposase | - |
| A0I37_RS28400 () | 64297..66993 | + | 2697 | WP_001358886.1 | metalloprotease StcE | - |
| A0I37_RS28405 () | 67080..67955 | + | 876 | WP_001302175.1 | type II secretion system protein GspC | - |
| A0I37_RS28410 () | 67956..69923 | + | 1968 | WP_001302177.1 | variant type II secretion system secretin EtpD | - |
| A0I37_RS28415 () | 69923..71428 | + | 1506 | WP_000092338.1 | type II secretion system ATPase GspE | - |
| A0I37_RS28420 () | 71430..72653 | + | 1224 | WP_001173152.1 | type II secretion system inner membrane protein GspF | - |
| A0I37_RS28425 () | 72684..73117 | + | 434 | Protein_75 | type II secretion system major pseudopilin GspG | - |
| A0I37_RS28430 () | 73114..73668 | + | 555 | WP_000082929.1 | type II secretion system minor pseudopilin GspH | - |
| A0I37_RS28435 () | 73683..74030 | + | 348 | WP_000173396.1 | type II secretion system minor pseudopilin GspI | - |
| A0I37_RS28440 () | 74027..74626 | + | 600 | WP_000082782.1 | type II secretion system minor pseudopilin GspJ | - |
| A0I37_RS28445 () | 74623..75600 | + | 978 | WP_000776550.1 | type II secretion system minor pseudopilin GspK | - |
| A0I37_RS28450 () | 75639..76811 | + | 1173 | WP_071525076.1 | type II secretion system protein GspL | - |
| A0I37_RS28455 () | 76798..77310 | + | 513 | WP_001004187.1 | type II secretion system protein M | - |
| A0I37_RS28460 () | 77368..78201 | + | 834 | WP_000096786.1 | A24 family peptidase | - |
| A0I37_RS28465 () | 78293..78694 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| A0I37_RS28475 () | 78873..80044 | + | 1172 | Protein_84 | IS3 family transposase | - |
| A0I37_RS28485 () | 80585..81100 | + | 516 | WP_000839950.1 | enterohemolysin-activating lysine-acyltransferase EhxC | - |
| A0I37_RS28490 () | 81102..84098 | + | 2997 | WP_000217733.1 | enterohemolysin EhxA | - |
| A0I37_RS28495 () | 84148..86268 | + | 2121 | WP_000987091.1 | enterohemolysin T1SS ABC transporter permease/ATPase EhxB | - |
| A0I37_RS28500 () | 86272..87711 | + | 1440 | WP_001213542.1 | enterohemolysin T1SS ABC transporter subunit EhxD | - |
| A0I37_RS28870 () | 87832..88324 | + | 493 | Protein_89 | MarR family transcriptional regulator | - |
| A0I37_RS28520 () | 88455..88685 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| A0I37_RS28525 () | 88806..89546 | + | 741 | WP_001066920.1 | tyrosine-type recombinase/integrase | - |
| A0I37_RS28530 () | 89831..90808 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| A0I37_RS28540 () | 91216..91416 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| A0I37_RS28545 () | 91413..92033 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| A0I37_RS28550 () | 92030..92713 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| A0I37_RS28555 () | 93172..93390 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|