MGE detailed information
MGE type: Genomic_island MGE length: 18721 bp
Accession: NZ_CP034794 Location: 5182179..5200899 Organism: Escherichia coli strain 06-3462 Replicon: chromosome
Accession: NZ_CP034794 Location: 5182179..5200899 Organism: Escherichia coli strain 06-3462 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A1D74_RS26465 () | 5177336..5178514 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| A1D74_RS26470 () | 5178582..5179424 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| A1D74_RS26480 () | 5179690..5181867 | - | 2178 | WP_000535057.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| A1D74_RS26485 () | 5182179..5182445 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| A1D74_RS26490 () | 5182442..5183209 | - | 768 | WP_000222489.1 | hypothetical protein | - |
| A1D74_RS26495 () | 5183219..5184370 | - | 1152 | WP_001301805.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| A1D74_RS26500 () | 5184486..5185757 | - | 1272 | WP_001037407.1 | DUF445 domain-containing protein | - |
| A1D74_RS26505 () | 5185798..5187030 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| A1D74_RS26515 () | 5187497..5188249 | + | 753 | Protein_5016 | Recombination-promoting nuclease RpnD | VF |
| A1D74_RS28395 () | 5188254..5188454 | + | 201 | WP_001310455.1 | hypothetical protein | - |
| A1D74_RS26520 () | 5188697..5190109 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| A1D74_RS26525 () | 5190286..5190450 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| A1D74_RS26530 () | 5190547..5191428 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| A1D74_RS26535 () | 5191476..5192639 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| A1D74_RS26540 () | 5192686..5193027 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - () | 5193022..5193098 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5193022..5193098 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5193022..5193098 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5193022..5193098 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5193022..5193098 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5193022..5193098 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5193022..5193098 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5193022..5193098 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| A1D74_RS26545 () | 5193248..5195002 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| A1D74_RS26550 () | 5195002..5196471 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| A1D74_RS26555 () | 5196538..5198970 | - | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| A1D74_RS26560 () | 5199248..5199532 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| A1D74_RS26565 () | 5199541..5200899 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| A1D74_RS26570 () | 5200968..5201924 | - | 957 | WP_001297640.1 | GTPase | - |
| A1D74_RS26575 () | 5201935..5202138 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| A1D74_RS26580 () | 5202188..5204338 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| A1D74_RS26585 () | 5204631..5205173 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |