MGE detailed information
MGE type: Genomic_island MGE length: 21216 bp
Accession: NZ_CP034792 Location: 3843094..3864309 Organism: Escherichia coli strain 2009C-3378 Replicon: chromosome
Accession: NZ_CP034792 Location: 3843094..3864309 Organism: Escherichia coli strain 2009C-3378 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DR788_RS19905 () | 3838820..3839362 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| DR788_RS19910 () | 3839655..3841805 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| DR788_RS19915 () | 3841855..3842058 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| DR788_RS19920 () | 3842069..3843025 | + | 957 | WP_001297640.1 | GTPase | - |
| DR788_RS19925 () | 3843094..3844452 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| DR788_RS19930 () | 3844461..3844745 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| DR788_RS19935 () | 3845023..3847455 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| DR788_RS19940 () | 3847522..3848991 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| DR788_RS19945 () | 3848991..3850745 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 3850895..3850971 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 3850895..3850971 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 3850895..3850971 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 3850895..3850971 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 3850895..3850971 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 3850895..3850971 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 3850895..3850971 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 3850895..3850971 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| DR788_RS19950 () | 3850966..3851307 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| DR788_RS19955 () | 3851354..3852517 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| DR788_RS19960 () | 3852565..3853446 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| DR788_RS19965 () | 3853543..3853707 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| DR788_RS19970 () | 3853884..3855296 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| DR788_RS28270 () | 3855539..3855739 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| DR788_RS19975 () | 3855744..3856496 | - | 753 | Protein_3790 | Recombination-promoting nuclease RpnD | VF |
| DR788_RS19985 () | 3856963..3858195 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| DR788_RS19990 () | 3858236..3859507 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| DR788_RS19995 () | 3859623..3860774 | + | 1152 | WP_001301805.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| DR788_RS20000 () | 3860784..3861551 | + | 768 | WP_000222488.1 | hypothetical protein | - |
| DR788_RS20005 () | 3861548..3861814 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| DR788_RS20010 () | 3862126..3864309 | + | 2184 | WP_000535062.1 | hypothetical protein | VF |
| DR788_RS20020 () | 3864575..3865417 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| DR788_RS20025 () | 3865485..3866663 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |