MGE detailed information
MGE type: Genomic_island MGE length: 33462 bp
Accession: NZ_CP034787 Location: 3711660..3745121 Organism: Escherichia coli strain ECCNB20-2 Replicon: chromosome
Accession: NZ_CP034787 Location: 3711660..3745121 Organism: Escherichia coli strain ECCNB20-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRG85_RS18065 () | 3706683..3707990 | - | 1308 | WP_000022200.1 | sugar ABC transporter permease | - |
| CRG85_RS18070 () | 3708053..3709285 | - | 1233 | WP_000742442.1 | extracellular solute-binding protein | - |
| CRG85_RS18075 () | 3709642..3710751 | + | 1110 | WP_016243364.1 | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | - |
| CRG85_RS18080 () | 3710895..3711125 | + | 231 | Protein_3475 | IS4/IS5 family transposase | - |
| CRG85_RS18085 () | 3711204..3711323 | + | 120 | Protein_3476 | IS481 family transposase | - |
| CRG85_RS18095 () | 3711817..3713152 | + | 1336 | Protein_3477 | Group II intron-encoded protein LtrA | VF |
| CRG85_RS18100 () | 3713478..3714041 | - | 564 | WP_000282099.1 | inovirus-type Gp2 protein | - |
| CRG85_RS18105 () | 3714900..3716332 | - | 1433 | Protein_3479 | DUF3987 domain-containing protein | - |
| CRG85_RS18110 () | 3716545..3716800 | - | 256 | Protein_3480 | DUF3987 domain-containing protein | - |
| CRG85_RS18115 () | 3716906..3717133 | - | 228 | WP_000270169.1 | AlpA family phage regulatory protein | - |
| CRG85_RS18120 () | 3717826..3719457 | + | 1632 | WP_001310566.1 | hypothetical protein | - |
| CRG85_RS18130 () | 3719544..3720125 | - | 582 | WP_001310565.1 | hypothetical protein | - |
| CRG85_RS18140 () | 3720641..3721894 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| CRG85_RS18145 () | 3721906..3723009 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| CRG85_RS18150 () | 3723297..3724352 | + | 1056 | WP_053901249.1 | phosphoporin PhoE | - |
| CRG85_RS18155 () | 3724391..3724792 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| CRG85_RS18160 () | 3724850..3726094 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3725510..3725590 | - | 81 | NuclAT_13 | - | - |
| - () | 3725510..3725590 | - | 81 | NuclAT_13 | - | - |
| - () | 3725510..3725590 | - | 81 | NuclAT_13 | - | - |
| - () | 3725510..3725590 | - | 81 | NuclAT_13 | - | - |
| CRG85_RS18165 () | 3726186..3726644 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| CRG85_RS18170 () | 3726905..3728362 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| CRG85_RS18175 () | 3728419..3728940 | - | 522 | Protein_3491 | peptide chain release factor H | - |
| CRG85_RS18180 () | 3728939..3729142 | - | 204 | Protein_3492 | RNA ligase RtcB family protein | - |
| CRG85_RS18185 () | 3729388..3729840 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| CRG85_RS18190 () | 3729850..3730248 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| CRG85_RS18195 () | 3730251..3730544 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| CRG85_RS18200 () | 3730596..3731651 | - | 1056 | WP_085452615.1 | DNA polymerase IV | - |
| CRG85_RS18205 () | 3731722..3732507 | - | 786 | WP_000207564.1 | Chemotaxis protein LafU | VF |
| CRG85_RS18210 () | 3732479..3734191 | + | 1713 | Protein_3498 | Flagellar biosynthesis protein FlhA | VF |
| CRG85_RS18215 () | 3734407..3734904 | - | 498 | WP_000006261.1 | REP-associated tyrosine transposase RayT | - |
| CRG85_RS18220 () | 3735080..3735853 | - | 774 | WP_001353765.1 | Murein DD-endopeptidase MepH | VF |
| CRG85_RS18225 () | 3736039..3736299 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| CRG85_RS18230 () | 3736302..3736580 | + | 279 | WP_000615979.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| CRG85_RS18235 () | 3736736..3737476 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| CRG85_RS18240 () | 3737447..3738214 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| CRG85_RS18245 () | 3738420..3738998 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| CRG85_RS18250 () | 3739238..3741682 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| CRG85_RS18255 () | 3741725..3742171 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| CRG85_RS18260 () | 3742352..3743122 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| CRG85_RS18265 () | 3743163..3744299 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| CRG85_RS26285 () | 3744730..3744906 | - | 177 | WP_000008098.1 | hypothetical protein | - |
| CRG85_RS18270 () | 3744903..3745121 | - | 219 | WP_001101841.1 | hypothetical protein | - |
| CRG85_RS18275 () | 3745099..3749079 | - | 3981 | Protein_3512 | RHS repeat protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|