MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93964 bp
Accession: NZ_CP034720 Location: 1..93964 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RSE04 Replicon: plasmid pRSE04
Accession: NZ_CP034720 Location: 1..93964 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RSE04 Replicon: plasmid pRSE04
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ELZ71_RS23790 () | 1237..1681 | - | 445 | Protein_1 | site-specific integrase | - |
| ELZ71_RS23795 () | 1850..2231 | - | 382 | Protein_2 | YgiW/YdeI family stress tolerance OB fold protein | - |
| ELZ71_RS23805 () | 2950..3252 | + | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| ELZ71_RS23810 () | 3527..4045 | + | 519 | WP_000748205.1 | major pilin PefA | - |
| ELZ71_RS23815 () | 4273..6681 | + | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| ELZ71_RS23820 () | 6674..7366 | + | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| ELZ71_RS23825 () | 7381..7938 | + | 558 | WP_010999940.1 | membrane protein | - |
| ELZ71_RS23830 () | 8191..9066 | + | 876 | WP_014343944.1 | hypothetical protein | - |
| ELZ71_RS23835 () | 9498..9710 | + | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| ELZ71_RS23840 () | 9695..10045 | + | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| ELZ71_RS23845 () | 10290..10943 | + | 654 | WP_000178592.1 | DsbA family protein | - |
| ELZ71_RS24420 () | 10933..11079 | + | 147 | WP_001192557.1 | hypothetical protein | - |
| ELZ71_RS23850 () | 11076..11975 | + | 900 | WP_010999938.1 | YjiK family protein | - |
| ELZ71_RS23855 () | 12065..12622 | + | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| ELZ71_RS23860 () | 12889..13647 | + | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| ELZ71_RS23865 () | 13744..13965 | - | 222 | WP_032492623.1 | SdiA-regulated domain-containing protein | - |
| ELZ71_RS23875 () | 14825..15706 | - | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| ELZ71_RS23880 () | 15687..15764 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| ELZ71_RS23885 () | 16014..16280 | - | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| ELZ71_RS23895 () | 16459..16901 | - | 443 | Protein_20 | phospholipase | - |
| ELZ71_RS23900 () | 17067..17222 | - | 156 | WP_000983042.1 | hypothetical protein | - |
| ELZ71_RS23905 () | 17235..17519 | - | 285 | WP_000477658.1 | hypothetical protein | - |
| ELZ71_RS23910 () | 17634..18197 | - | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| ELZ71_RS23915 () | 18252..18992 | - | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| ELZ71_RS23920 () | 19012..24270 | - | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| ELZ71_RS23925 () | 24352..24579 | + | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| ELZ71_RS23930 () | 24579..24977 | + | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| ELZ71_RS23935 () | 24986..27220 | - | 2235 | WP_000009319.1 | type IV conjugative transfer system coupling protein TraD | - |
| ELZ71_RS23940 () | 27597..28328 | - | 732 | WP_022743186.1 | complement resistance protein TraT | - |
| ELZ71_RS23945 () | 28364..28858 | - | 495 | WP_010999946.1 | entry exclusion protein | - |
| ELZ71_RS23950 () | 28874..31696 | - | 2823 | WP_127201233.1 | conjugal transfer mating pair stabilization protein TraG | - |
| ELZ71_RS23955 () | 31693..33075 | - | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| ELZ71_RS23960 () | 33065..33613 | - | 549 | WP_022743183.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| ELZ71_RS23965 () | 33600..33893 | - | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| ELZ71_RS23970 () | 34107..34856 | - | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| ELZ71_RS23975 () | 34868..35083 | - | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| ELZ71_RS23980 () | 35094..36920 | - | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| ELZ71_RS23985 () | 36917..37336 | - | 420 | WP_001229397.1 | HNH endonuclease | - |
| ELZ71_RS23990 () | 37373..38011 | - | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| ELZ71_RS23995 () | 37996..38304 | - | 309 | WP_010999945.1 | hypothetical protein | - |
| ELZ71_RS24000 () | 38323..39315 | - | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| ELZ71_RS24005 () | 39312..39944 | - | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| ELZ71_RS24010 () | 39941..40327 | - | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| ELZ71_RS24015 () | 40302..42950 | - | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| ELZ71_RS24020 () | 42966..43229 | - | 264 | WP_001239256.1 | hypothetical protein | - |
| ELZ71_RS24025 () | 43346..43813 | - | 468 | WP_000549562.1 | hypothetical protein | - |
| ELZ71_RS24030 () | 43806..44027 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| ELZ71_RS24035 () | 44162..44677 | - | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| ELZ71_RS24040 () | 44674..44919 | - | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| ELZ71_RS24045 () | 44897..45493 | - | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| ELZ71_RS24050 () | 45483..46904 | - | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| ELZ71_RS24055 () | 46904..47644 | - | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| ELZ71_RS24060 () | 47631..48197 | - | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| ELZ71_RS24065 () | 48219..48530 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| ELZ71_RS24070 () | 48545..48907 | - | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| ELZ71_RS24075 () | 48949..49176 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| ELZ71_RS24080 () | 49270..49956 | - | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| ELZ71_RS24085 () | 50149..50529 | - | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| ELZ71_RS24095 () | 50944..51414 | + | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| ELZ71_RS24100 () | 51725..52543 | - | 819 | Protein_60 | DUF945 domain-containing protein | - |
| ELZ71_RS24425 () | 52646..52804 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| ELZ71_RS24105 () | 53053..53790 | - | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| ELZ71_RS24110 () | 53787..54221 | - | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| ELZ71_RS24115 () | 54261..56258 | - | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| ELZ71_RS24120 () | 56327..56569 | - | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| ELZ71_RS24125 () | 56624..57142 | - | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| ELZ71_RS24135 () | 57736..57939 | - | 204 | WP_127201234.1 | hypothetical protein | - |
| ELZ71_RS24140 () | 57903..58226 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| ELZ71_RS24145 () | 58462..58896 | - | 435 | WP_000274533.1 | DUF1380 family protein | - |
| ELZ71_RS24150 () | 58963..59397 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| ELZ71_RS24160 () | 59893..60657 | - | 765 | WP_001246548.1 | membrane protein | - |
| ELZ71_RS24165 () | 60729..61142 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| ELZ71_RS24170 () | 61198..61419 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| ELZ71_RS24175 () | 61419..62099 | - | 681 | WP_000088645.1 | DNA methylase | - |
| ELZ71_RS24185 () | 62481..62837 | - | 357 | WP_000369839.1 | hypothetical protein | - |
| ELZ71_RS24190 () | 62830..63300 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| ELZ71_RS24195 () | 63811..64233 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| ELZ71_RS24200 () | 64233..65507 | + | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| ELZ71_RS24205 () | 65589..66563 | - | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| ELZ71_RS24210 () | 66563..67768 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| ELZ71_RS24215 () | 68183..69124 | + | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| ELZ71_RS24220 () | 69156..69722 | - | 567 | WP_001541562.1 | DUF2913 family protein | - |
| ELZ71_RS24225 () | 69779..70114 | - | 336 | WP_001527010.1 | hypothetical protein | - |
| ELZ71_RS24230 () | 70298..70714 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| ELZ71_RS24235 () | 70800..71915 | - | 1116 | WP_001247118.1 | DNA-binding protein | - |
| ELZ71_RS24240 () | 72174..72662 | + | 489 | WP_001135407.1 | hypothetical protein | - |
| ELZ71_RS24250 () | 73317..74057 | + | 741 | WP_001541566.1 | carbonic anhydrase | - |
| ELZ71_RS24255 () | 74264..74824 | + | 561 | WP_001240331.1 | recombinase family protein | - |
| ELZ71_RS24260 () | 74808..76472 | + | 1665 | WP_000098783.1 | IS481 family transposase | - |
| ELZ71_RS24265 () | 76405..77430 | + | 1026 | WP_001576625.1 | ExeA family protein | - |
| ELZ71_RS24270 () | 77619..78656 | - | 1038 | WP_001121399.1 | IS630 family transposase | - |
| ELZ71_RS24275 () | 79265..80158 | + | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| ELZ71_RS24280 () | 80332..80496 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| ELZ71_RS24285 () | 80670..81437 | + | 768 | WP_001526990.1 | virulence protein SpvA | - |
| ELZ71_RS24430 () | 81400..81567 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| ELZ71_RS24290 () | 81619..83394 | + | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| ELZ71_RS24295 () | 83675..84400 | + | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| ELZ71_RS24300 () | 84661..85311 | + | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| ELZ71_RS24305 () | 85438..85862 | - | 425 | Protein_99 | IS200/IS605 family transposase | - |
| ELZ71_RS24310 () | 85919..86269 | + | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| ELZ71_RS24315 () | 86336..86896 | - | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| ELZ71_RS24435 () | 87052..87339 | + | 288 | WP_071530243.1 | hypothetical protein | - |
| ELZ71_RS24320 () | 87616..88101 | - | 486 | WP_000905606.1 | membrane protein | - |
| ELZ71_RS24325 () | 88095..88604 | - | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| ELZ71_RS24335 () | 88608..89321 | - | 714 | Protein_105 | EAL domain-containing protein | - |
| ELZ71_RS24340 () | 89330..90112 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| ELZ71_RS24345 () | 90147..90668 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| ELZ71_RS24350 () | 90665..90955 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| ELZ71_RS24355 () | 90957..91262 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | - |
| ELZ71_RS24360 () | 91264..91482 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| ELZ71_RS24365 () | 92158..92679 | + | 522 | WP_010999942.1 | hypothetical protein | - |
| ELZ71_RS24375 () | 93163..93459 | + | 297 | WP_001687482.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|