MGE detailed information
MGE type: Genomic_island MGE length: 23218 bp
Accession: NZ_CP034106 Location: 4081772..4104989 Organism: Escherichia coli strain RCAD0514 Replicon: chromosome
Accession: NZ_CP034106 Location: 4081772..4104989 Organism: Escherichia coli strain RCAD0514 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGA47_RS19630 () | 4077276..4077677 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| EGA47_RS19635 () | 4077735..4078979 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 4078395..4078475 | - | 81 | NuclAT_9 | - | - |
| - () | 4078395..4078475 | - | 81 | NuclAT_9 | - | - |
| - () | 4078395..4078475 | - | 81 | NuclAT_9 | - | - |
| - () | 4078395..4078475 | - | 81 | NuclAT_9 | - | - |
| EGA47_RS19640 () | 4079071..4079529 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| EGA47_RS19645 () | 4079790..4081246 | + | 1457 | Protein_3828 | cytosol nonspecific dipeptidase | - |
| EGA47_RS19650 () | 4081303..4081824 | - | 522 | Protein_3829 | peptide chain release factor H | - |
| EGA47_RS19655 () | 4081823..4082026 | - | 204 | Protein_3830 | RNA ligase RtcB family protein | - |
| EGA47_RS19660 () | 4082272..4082724 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| EGA47_RS19665 () | 4082734..4083132 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| EGA47_RS19670 () | 4083135..4083428 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| EGA47_RS19675 () | 4083480..4084535 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| EGA47_RS19680 () | 4084606..4085391 | - | 786 | WP_000207587.1 | hypothetical protein | VF |
| EGA47_RS19685 () | 4085363..4087075 | + | 1713 | Protein_3836 | hypothetical protein | VF |
| EGA47_RS19690 () | 4087299..4087796 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| EGA47_RS19695 () | 4087972..4088745 | - | 774 | WP_015675129.1 | hypothetical protein | VF |
| EGA47_RS19700 () | 4088931..4089191 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| EGA47_RS19705 () | 4089194..4089472 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| EGA47_RS19710 () | 4089628..4090368 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| EGA47_RS19715 () | 4090339..4091106 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| EGA47_RS19720 () | 4091312..4091890 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| EGA47_RS19725 () | 4092130..4094574 | + | 2445 | WP_000973083.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| EGA47_RS19730 () | 4094617..4095063 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| EGA47_RS19735 () | 4095244..4096014 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| EGA47_RS19740 () | 4096158..4096855 | - | 698 | Protein_3847 | IS1 family transposase IS1R | Transposase |
| EGA47_RS19745 () | 4097119..4097412 | - | 294 | Protein_3848 | hypothetical protein | - |
| EGA47_RS19750 () | 4097476..4097724 | + | 249 | Protein_3849 | IS3 family transposase ISEhe3 | Transposase |
| EGA47_RS19755 () | 4097789..4098940 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| EGA47_RS19760 () | 4098947..4099842 | + | 896 | Protein_3851 | IS3 family transposase ISSd1 | Transposase |
| EGA47_RS19765 () | 4099955..4100389 | - | 435 | WP_000723071.1 | hypothetical protein | - |
| EGA47_RS19770 () | 4100607..4102007 | - | 1401 | WP_001211180.1 | copper resistance membrane spanning protein PcoS | - |
| EGA47_RS19775 () | 4102004..4102684 | - | 681 | WP_001188930.1 | Regulator of RpoS | VF |
| EGA47_RS19780 () | 4102739..4103668 | - | 930 | WP_000998778.1 | copper resistance inner membrane protein PcoD | - |
| EGA47_RS19785 () | 4103673..4104053 | - | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| EGA47_RS19790 () | 4104093..4104983 | - | 891 | WP_185695703.1 | copper resistance outer membrane transporter PcoB | - |
| EGA47_RS19795 () | 4104989..4106805 | - | 1817 | Protein_3858 | multicopper oxidase PcoA | - |
| EGA47_RS19800 () | 4107040..4107489 | + | 450 | WP_001023257.1 | copper resistance protein | - |
| EGA47_RS19805 () | 4107778..4108515 | + | 738 | WP_000287502.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| EGA47_RS19810 () | 4108549..4108746 | - | 198 | WP_000843494.1 | DUF2933 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|