MGE detailed information
MGE type: Prophage MGE length: 65731 bp
Accession: NZ_CP034011 Location: 1514337..1580067 Organism: Staphylococcus aureus strain P1D5C1 Replicon: chromosome
Accession: NZ_CP034011 Location: 1514337..1580067 Organism: Staphylococcus aureus strain P1D5C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFD68_RS07130 () | 1510606..1511985 | - | 1380 | WP_000902099.1 | ATP-dependent DNA helicase | - |
| EFD68_RS07135 () | 1511975..1512928 | - | 954 | WP_031774347.1 | helix-turn-helix domain-containing protein | - |
| EFD68_RS07140 () | 1513036..1513284 | + | 249 | WP_001151997.1 | ferredoxin | - |
| EFD68_RS07145 () | 1513390..1513935 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| EFD68_RS07150 () | 1514337..1515293 | - | 957 | WP_000913227.1 | DUF1672 domain-containing protein | - |
| EFD68_RS14030 () | 1515347..1515752 | - | 406 | Protein_1386 | hypothetical protein | - |
| EFD68_RS07160 () | 1515764..1516660 | - | 897 | WP_000476354.1 | DUF1672 domain-containing protein | - |
| EFD68_RS07165 () | 1516718..1517623 | - | 906 | WP_000476865.1 | DUF1672 domain-containing protein | - |
| EFD68_RS07170 () | 1517713..1517928 | - | 216 | WP_000209712.1 | hypothetical protein | - |
| EFD68_RS07175 () | 1518651..1520105 | - | 1455 | WP_000909205.1 | N-acetylmuramoyl-L-alanine amidase | - |
| EFD68_RS07180 () | 1520116..1520418 | - | 303 | WP_000339141.1 | phage holin | - |
| EFD68_RS07185 () | 1520554..1520853 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| EFD68_RS07190 () | 1520899..1521063 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| EFD68_RS07195 () | 1521056..1521445 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| EFD68_RS07200 () | 1521445..1522911 | - | 1467 | WP_000067132.1 | BppU family phage baseplate upper protein | - |
| EFD68_RS07205 () | 1522911..1524821 | - | 1911 | WP_000429551.1 | minor structural protein | - |
| EFD68_RS07210 () | 1524837..1525127 | - | 291 | WP_000179864.1 | hypothetical protein | - |
| EFD68_RS07215 () | 1525127..1526710 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| EFD68_RS07220 () | 1526719..1527543 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| EFD68_RS07225 () | 1527543..1533743 | - | 6201 | WP_001003458.1 | phage tail tape measure protein | - |
| EFD68_RS07230 () | 1533757..1533915 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| EFD68_RS07235 () | 1533957..1534307 | - | 351 | WP_000589165.1 | hypothetical protein | - |
| EFD68_RS07240 () | 1534365..1534820 | - | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| EFD68_RS07245 () | 1534912..1535553 | - | 642 | WP_000807536.1 | tail protein | - |
| EFD68_RS07250 () | 1535588..1535983 | - | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| EFD68_RS07255 () | 1535984..1536385 | - | 402 | WP_000110020.1 | hypothetical protein | - |
| EFD68_RS07260 () | 1536382..1536714 | - | 333 | WP_000395501.1 | hypothetical protein | - |
| EFD68_RS07265 () | 1536726..1537004 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| EFD68_RS07270 () | 1537073..1538236 | - | 1164 | WP_001142739.1 | phage major capsid protein | - |
| EFD68_RS07275 () | 1538248..1539021 | - | 774 | WP_000061872.1 | Clp protease ClpP | - |
| EFD68_RS07280 () | 1539005..1540243 | - | 1239 | WP_001100660.1 | phage portal protein | - |
| EFD68_RS07285 () | 1540248..1541939 | - | 1692 | WP_000152858.1 | terminase large subunit | - |
| EFD68_RS07290 () | 1541929..1542234 | - | 306 | WP_000778935.1 | P27 family phage terminase small subunit | - |
| EFD68_RS07295 () | 1542359..1542679 | - | 321 | WP_000166884.1 | HNH endonuclease | - |
| EFD68_RS07300 () | 1542836..1543273 | - | 438 | WP_000513704.1 | transcriptional regulator | - |
| EFD68_RS07305 () | 1543286..1544653 | - | 1368 | WP_078069123.1 | DEAD/DEAH box helicase | - |
| EFD68_RS07310 () | 1544634..1544924 | - | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| EFD68_RS07315 () | 1545058..1545162 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| EFD68_RS07320 () | 1545265..1547712 | - | 2448 | WP_156668016.1 | virulence-associated E family protein | - |
| EFD68_RS07325 () | 1547765..1547965 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| EFD68_RS07330 () | 1548033..1548185 | - | 153 | WP_000595269.1 | transcriptional activator RinB | - |
| EFD68_RS07335 () | 1548182..1548571 | - | 390 | WP_001596346.1 | hypothetical protein | - |
| EFD68_RS07340 () | 1548561..1548797 | - | 237 | WP_000608283.1 | hypothetical protein | - |
| EFD68_RS07345 () | 1548790..1548993 | - | 204 | WP_000141259.1 | hypothetical protein | - |
| EFD68_RS07350 () | 1548990..1549196 | - | 207 | WP_000195832.1 | DUF1381 domain-containing protein | - |
| EFD68_RS07355 () | 1549233..1549769 | - | 537 | WP_156668017.1 | dUTPase | - |
| EFD68_RS07360 () | 1549762..1549932 | - | 171 | WP_000714407.1 | hypothetical protein | - |
| EFD68_RS07365 () | 1549919..1550173 | - | 255 | WP_001065040.1 | DUF1024 family protein | - |
| EFD68_RS07370 () | 1550188..1550430 | - | 243 | WP_000132194.1 | hypothetical protein | - |
| EFD68_RS07375 () | 1550445..1550645 | - | 201 | WP_000235324.1 | hypothetical protein | - |
| EFD68_RS07380 () | 1550648..1550905 | - | 258 | WP_000022728.1 | DUF3310 domain-containing protein | - |
| EFD68_RS07385 () | 1550905..1551306 | - | 402 | WP_000113974.1 | PVL family protein | - |
| EFD68_RS07390 () | 1551306..1551491 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| EFD68_RS07395 () | 1551504..1553456 | - | 1953 | WP_156668018.1 | DNA polymerase | - |
| EFD68_RS07400 () | 1553525..1554082 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| EFD68_RS07405 () | 1554109..1555275 | - | 1167 | WP_000762527.1 | DUF2800 domain-containing protein | - |
| EFD68_RS07410 () | 1555272..1555634 | - | 363 | WP_000985972.1 | hypothetical protein | - |
| EFD68_RS07415 () | 1555649..1555972 | - | 324 | WP_000174998.1 | hypothetical protein | - |
| EFD68_RS07420 () | 1556051..1556212 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| EFD68_RS07425 () | 1556225..1556488 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| EFD68_RS07430 () | 1556513..1556728 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| EFD68_RS07435 () | 1556783..1557148 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| EFD68_RS07440 () | 1557117..1557362 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| EFD68_RS07445 () | 1557429..1557809 | + | 381 | WP_000773059.1 | DUF2513 domain-containing protein | - |
| EFD68_RS07450 () | 1557796..1557993 | - | 198 | WP_001148860.1 | hypothetical protein | - |
| EFD68_RS07455 () | 1558063..1558275 | + | 213 | WP_000362644.1 | hypothetical protein | - |
| EFD68_RS14035 () | 1558316..1558465 | - | 150 | WP_000771849.1 | hypothetical protein | - |
| EFD68_RS07460 () | 1558480..1558923 | - | 444 | WP_000435357.1 | hypothetical protein | - |
| EFD68_RS07465 () | 1558971..1559183 | - | 213 | WP_000213811.1 | helix-turn-helix transcriptional regulator | - |
| EFD68_RS07470 () | 1559335..1560066 | + | 732 | WP_000511090.1 | XRE family transcriptional regulator | - |
| EFD68_RS07475 () | 1560136..1560318 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| EFD68_RS07480 () | 1560354..1560500 | + | 147 | WP_001795334.1 | hypothetical protein | - |
| EFD68_RS07485 () | 1560497..1561111 | - | 615 | WP_000191466.1 | hypothetical protein | - |
| EFD68_RS07490 () | 1561237..1562442 | + | 1206 | WP_000264750.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| EFD68_RS07495 () | 1562485..1564512 | - | 2028 | WP_001795335.1 | hypothetical protein | - |
| EFD68_RS07500 () | 1564505..1565431 | - | 927 | WP_001557355.1 | DUF1672 domain-containing protein | - |
| EFD68_RS07505 () | 1565675..1567426 | - | 1752 | WP_000987774.1 | two-component system sensor histidine kinase SrrB | - |
| EFD68_RS07510 () | 1567407..1568132 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| EFD68_RS07515 () | 1568265..1569002 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| EFD68_RS07520 () | 1568995..1569537 | - | 543 | WP_156668019.1 | SMC-Scp complex subunit ScpB | - |
| EFD68_RS07525 () | 1569530..1570261 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| EFD68_RS07530 () | 1570353..1570859 | + | 507 | WP_001183429.1 | DUF309 domain-containing protein | - |
| EFD68_RS07535 () | 1570937..1571824 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| EFD68_RS07540 () | 1571873..1572322 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| EFD68_RS07545 () | 1572427..1572969 | - | 543 | WP_000365240.1 | NUDIX hydrolase | - |
| EFD68_RS07550 () | 1573051..1573959 | + | 909 | WP_001171335.1 | aldo/keto reductase | - |
| EFD68_RS07555 () | 1574175..1574423 | - | 249 | WP_000995800.1 | hypothetical protein | - |
| EFD68_RS07560 () | 1574439..1575194 | - | 756 | WP_000678232.1 | SDR family oxidoreductase | - |
| EFD68_RS07565 () | 1575336..1576151 | + | 816 | WP_156668020.1 | pyrroline-5-carboxylate reductase | - |
| EFD68_RS07570 () | 1576254..1577174 | - | 921 | WP_000454063.1 | ribonuclease Z | - |
| EFD68_RS07575 () | 1577487..1578971 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| EFD68_RS07580 () | 1579201..1580067 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| EFD68_RS07585 () | 1580149..1581798 | - | 1650 | WP_001041912.1 | alpha-glucosidase | - |
| EFD68_RS07590 () | 1581814..1582833 | - | 1020 | WP_156668021.1 | LacI family DNA-binding transcriptional regulator | - |
| EFD68_RS07595 () | 1582834..1583088 | - | 255 | WP_001792107.1 | hypothetical protein | - |
| EFD68_RS07600 () | 1583027..1583398 | - | 372 | WP_000413436.1 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|