MGE detailed information
MGE type: Conjugative plasmid MGE length: 125113 bp
Accession: NZ_CP033895 Location: 1..125113 Organism: Serratia liquefaciens strain FG3 Replicon: plasmid p2-125
Accession: NZ_CP033895 Location: 1..125113 Organism: Serratia liquefaciens strain FG3 Replicon: plasmid p2-125
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGO53_RS29335 () | 608..748 | + | 141 | WP_185959443.1 | hypothetical protein | - |
| EGO53_RS28395 () | 876..2099 | + | 1224 | WP_142816584.1 | IS91 family transposase ISVa3 | Transposase |
| EGO53_RS28400 () | 2302..2640 | - | 339 | WP_142816585.1 | Bor family protein | - |
| EGO53_RS28405 () | 2717..3346 | + | 630 | Protein_4 | IS91 family transposase ISVa3 | Transposase |
| EGO53_RS28410 () | 3651..4310 | + | 660 | WP_142816586.1 | LuxR family transcriptional regulator | - |
| EGO53_RS28415 () | 4345..4464 | + | 120 | Protein_6 | IS6 family transposase ISEas1 | Transposase |
| EGO53_RS28420 () | 4652..5864 | - | 1213 | Protein_7 | IS91 family transposase ISVa3 | Transposase |
| EGO53_RS28425 () | 7429..8123 | + | 695 | Protein_8 | IS6 family transposase ISEas1 | Transposase |
| EGO53_RS28430 () | 9235..9963 | + | 729 | WP_142816587.1 | Chaperone protein FocC | VF |
| EGO53_RS28435 () | 9977..12547 | + | 2571 | WP_142816588.1 | Outer membrane usher protein FimD | VF |
| EGO53_RS28440 () | 12601..13077 | + | 477 | WP_142816578.1 | hypothetical protein | - |
| EGO53_RS28450 () | 15190..15825 | - | 636 | Protein_12 | DUF2913 family protein | - |
| EGO53_RS28455 () | 15853..16785 | - | 933 | WP_142816589.1 | Recombination-promoting nuclease RpnA | VF |
| EGO53_RS28460 () | 16857..17741 | - | 885 | WP_142816590.1 | restriction endonuclease | - |
| EGO53_RS28465 () | 18207..18950 | + | 744 | WP_025862211.1 | tyrosine-type recombinase/integrase | - |
| EGO53_RS28470 () | 19122..19745 | + | 624 | WP_025862212.1 | AAA family ATPase | - |
| EGO53_RS28475 () | 19748..19990 | + | 243 | WP_142816591.1 | hypothetical protein | - |
| EGO53_RS28480 () | 20189..20479 | - | 291 | WP_070914201.1 | hypothetical protein | - |
| EGO53_RS28485 () | 20682..21866 | - | 1185 | WP_142816592.1 | pyridoxal phosphate-dependent aminotransferase | - |
| EGO53_RS28490 () | 21859..23298 | - | 1440 | WP_142816593.1 | Na+/H+ antiporter NhaC | - |
| EGO53_RS28495 () | 23444..24454 | - | 1011 | WP_142816594.1 | LacI family DNA-binding transcriptional regulator | - |
| EGO53_RS28505 () | 24824..25468 | + | 645 | WP_142816596.1 | DNA methylase | - |
| EGO53_RS28510 () | 25485..25706 | + | 222 | WP_142816597.1 | hypothetical protein | - |
| EGO53_RS28515 () | 26131..26556 | + | 426 | WP_094887923.1 | antirestriction protein | - |
| EGO53_RS28520 () | 26615..27013 | + | 399 | WP_142816598.1 | DUF1380 family protein | - |
| EGO53_RS28525 () | 27672..27962 | + | 291 | WP_142816599.1 | ribulokinase | - |
| EGO53_RS28530 () | 28049..30106 | + | 2058 | WP_142816600.1 | ParB/RepB/Spo0J family partition protein | - |
| EGO53_RS28535 () | 30148..30588 | + | 441 | WP_142816601.1 | conjugation system SOS inhibitor PsiB | - |
| EGO53_RS28540 () | 30585..31193 | + | 609 | WP_185959444.1 | plasmid SOS inhibition protein A | - |
| EGO53_RS28545 () | 31869..32333 | + | 465 | WP_142816603.1 | protein TraE | - |
| EGO53_RS28550 () | 32370..32717 | + | 348 | WP_142816604.1 | hypothetical protein | - |
| EGO53_RS28555 () | 32807..33070 | + | 264 | WP_042785950.1 | hypothetical protein | - |
| EGO53_RS28560 () | 33125..33922 | + | 798 | WP_142816605.1 | type I restriction-modification system subunit M | - |
| EGO53_RS28565 () | 34660..35031 | + | 372 | WP_142816606.1 | dehydrogenase | - |
| EGO53_RS28570 () | 35088..35915 | + | 828 | WP_042785947.1 | DUF945 domain-containing protein | - |
| EGO53_RS28575 () | 36017..36313 | + | 297 | WP_142816607.1 | hypothetical protein | - |
| EGO53_RS28580 () | 36599..37075 | - | 477 | WP_142816608.1 | hypothetical protein | VF |
| EGO53_RS28585 () | 37496..37891 | + | 396 | WP_142816609.1 | relaxosome protein TraM | - |
| EGO53_RS28590 () | 38021..39736 | - | 1716 | WP_142816610.1 | hybrid sensor histidine kinase/response regulator | - |
| EGO53_RS28595 () | 39733..40227 | - | 495 | WP_142816611.1 | oxidoreductase | - |
| EGO53_RS28600 () | 40214..41209 | - | 996 | WP_142816612.1 | glycosyltransferase family 9 protein | - |
| EGO53_RS28605 () | 41212..42054 | - | 843 | WP_142816613.1 | response regulator | - |
| EGO53_RS28610 () | 42386..42562 | + | 177 | Protein_43 | TraY domain-containing protein | - |
| EGO53_RS28615 () | 42614..42775 | + | 162 | WP_142816674.1 | TraY domain-containing protein | - |
| EGO53_RS28620 () | 42950..43336 | + | 387 | WP_142816675.1 | TraY domain-containing protein | - |
| EGO53_RS28625 () | 43401..43751 | + | 351 | WP_142816614.1 | type IV conjugative transfer system pilin TraA | - |
| EGO53_RS28630 () | 43901..44206 | + | 306 | WP_142816615.1 | type IV conjugative transfer system protein TraL | - |
| EGO53_RS28635 () | 44221..44787 | + | 567 | WP_142816616.1 | type IV conjugative transfer system protein TraE | - |
| EGO53_RS28640 () | 44813..45517 | + | 705 | WP_185959447.1 | type-F conjugative transfer system secretin TraK | - |
| EGO53_RS28645 () | 45504..46898 | + | 1395 | WP_142816618.1 | conjugal transfer protein TraB | - |
| EGO53_RS28650 () | 47051..47437 | + | 387 | WP_142816619.1 | hypothetical protein | - |
| EGO53_RS28655 () | 47462..48001 | + | 540 | WP_142816676.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EGO53_RS28660 () | 48135..48350 | + | 216 | WP_142816620.1 | hypothetical protein | - |
| EGO53_RS28665 () | 48416..48586 | + | 171 | WP_142816677.1 | Clp protease | - |
| EGO53_RS28670 () | 48583..49071 | + | 489 | WP_142816621.1 | conjugal transfer protein TraP | - |
| EGO53_RS28675 () | 49064..51692 | + | 2629 | Protein_56 | type IV secretion system protein TraC | - |
| EGO53_RS28685 () | 52031..52552 | + | 522 | WP_185959445.1 | type-F conjugative transfer system protein TrbI | - |
| EGO53_RS28690 () | 52549..53205 | + | 657 | WP_142816624.1 | type-F conjugative transfer system protein TraW | - |
| EGO53_RS28695 () | 53258..54205 | + | 948 | WP_185959448.1 | conjugal transfer pilus assembly protein TraU | - |
| EGO53_RS28700 () | 54220..54849 | + | 630 | WP_142816626.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EGO53_RS28705 () | 54864..56723 | + | 1860 | WP_185959449.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| EGO53_RS28710 () | 56732..57475 | + | 744 | WP_142816628.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| EGO53_RS28715 () | 57492..57755 | + | 264 | WP_142816629.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| EGO53_RS28720 () | 57745..58311 | + | 567 | WP_142816630.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| EGO53_RS28725 () | 58308..59675 | + | 1368 | WP_185959446.1 | conjugal transfer protein TraH | - |
| EGO53_RS28730 () | 59675..62503 | + | 2829 | WP_142816631.1 | conjugal transfer mating pair stabilization protein TraG | - |
| EGO53_RS28735 () | 62512..63027 | + | 516 | WP_142816632.1 | hypothetical protein | - |
| EGO53_RS28740 () | 63352..65538 | + | 2187 | WP_142816633.1 | type IV conjugative transfer system coupling protein TraD | - |
| EGO53_RS28745 () | 65538..70784 | + | 5247 | WP_142816634.1 | Multifunctional conjugation protein TraI | Relaxase |
| EGO53_RS28750 () | 70786..71523 | + | 738 | WP_142816635.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| EGO53_RS28755 () | 71685..72245 | + | 561 | WP_142816636.1 | Phospholipase D | VF |
| EGO53_RS28760 () | 72382..72633 | + | 252 | WP_142816637.1 | replication regulatory protein RepA | - |
| EGO53_RS28765 () | 73060..74007 | + | 948 | WP_142816679.1 | Replication protein | - |
| EGO53_RS28770 () | 74980..75195 | + | 216 | WP_142816638.1 | hypothetical protein | - |
| EGO53_RS28775 () | 75244..76467 | - | 1224 | WP_142816639.1 | IS91 family transposase ISVa3 | Transposase |
| EGO53_RS28780 () | 76694..77032 | + | 339 | Protein_76 | ankyrin repeat domain-containing protein | - |
| EGO53_RS28785 () | 77680..78201 | + | 522 | WP_142816640.1 | Superoxide dismutase [Cu-Zn] | VF |
| EGO53_RS28790 () | 78418..78585 | + | 168 | Protein_78 | IS6 family transposase ISYps1 | Transposase |
| EGO53_RS28795 () | 78664..78893 | + | 230 | Protein_79 | phosphoribulokinase | - |
| EGO53_RS28800 () | 78987..79433 | + | 447 | WP_072628372.1 | Ivy family C-type lysozyme inhibitor | - |
| EGO53_RS28805 () | 79653..79943 | + | 291 | Protein_81 | IS6 family transposase ISYps1 | Transposase |
| EGO53_RS28810 () | 79992..80687 | - | 696 | WP_142816641.1 | IS6 family transposase ISEas1 | Transposase |
| EGO53_RS28820 () | 80999..81904 | - | 906 | WP_142816643.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| EGO53_RS28825 () | 81922..82428 | - | 507 | WP_142816644.1 | Protein FimG | VF |
| EGO53_RS28830 () | 82442..82972 | - | 531 | WP_185959439.1 | Protein FimF | VF |
| EGO53_RS28835 () | 82982..85609 | - | 2628 | WP_142816645.1 | Outer membrane usher protein FimD | VF |
| EGO53_RS28840 () | 85677..86372 | - | 696 | WP_185959450.1 | Chaperone protein FimC | VF |
| EGO53_RS28845 () | 86415..86954 | - | 540 | WP_142816647.1 | Type-1 fimbrial protein, A chain | VF |
| EGO53_RS28850 () | 87028..87588 | - | 561 | WP_142816648.1 | Fimbrial subunit type 1 | VF |
| EGO53_RS28855 () | 88376..89073 | + | 698 | Protein_90 | IS1 family transposase | - |
| EGO53_RS28860 () | 89223..90146 | + | 924 | WP_142816649.1 | LysR family transcriptional regulator | - |
| EGO53_RS28865 () | 90275..90970 | - | 696 | WP_142816641.1 | IS6 family transposase ISEas1 | Transposase |
| EGO53_RS28870 () | 91031..91705 | + | 675 | Protein_93 | Recombination-promoting nuclease RpnA | VF |
| EGO53_RS28875 () | 91830..92092 | + | 263 | Protein_94 | IS6 family transposase ISYps1 | Transposase |
| EGO53_RS28880 () | 92433..93173 | + | 741 | WP_142816650.1 | carbonic anhydrase | - |
| EGO53_RS28885 () | 93379..93490 | + | 112 | Protein_96 | recombinase family protein | - |
| EGO53_RS28890 () | 93468..93632 | - | 165 | WP_142816651.1 | winged helix-turn-helix transcriptional regulator | - |
| EGO53_RS28895 () | 93684..95028 | - | 1345 | Protein_98 | IS3 family transposase | - |
| EGO53_RS28905 () | 95589..96134 | - | 546 | WP_142816681.1 | hypothetical protein | - |
| EGO53_RS28910 () | 96486..96968 | - | 483 | WP_142816652.1 | Protein hcp1 | VF |
| EGO53_RS28915 () | 97031..97513 | - | 483 | WP_142816653.1 | Protein hcp1 | VF |
| EGO53_RS28920 () | 97759..98046 | + | 288 | WP_185959440.1 | IS91 family transposase ISVsa9 | Transposase |
| EGO53_RS28925 () | 98552..99265 | + | 714 | WP_142816654.1 | hypothetical protein | - |
| EGO53_RS28935 () | 100503..100763 | + | 261 | WP_142816656.1 | DUF1471 domain-containing protein | - |
| EGO53_RS28940 () | 101044..101739 | + | 696 | WP_142816641.1 | IS6 family transposase ISEas1 | Transposase |
| EGO53_RS28945 () | 102865..103056 | - | 192 | WP_142816657.1 | hypothetical protein | - |
| EGO53_RS28950 () | 103110..103403 | - | 294 | WP_089186945.1 | hypothetical protein | - |
| EGO53_RS28955 () | 103404..104255 | - | 852 | WP_142816658.1 | hypothetical protein | VF |
| EGO53_RS28960 () | 104863..105153 | + | 291 | WP_142816682.1 | ribulokinase | - |
| EGO53_RS28965 () | 105253..107301 | + | 2049 | WP_142816683.1 | ParB/RepB/Spo0J family partition protein | - |
| EGO53_RS28970 () | 107343..107783 | + | 441 | WP_142816659.1 | conjugation system SOS inhibitor PsiB | - |
| EGO53_RS28975 () | 107780..108505 | + | 726 | WP_185959441.1 | plasmid SOS inhibition protein A | - |
| EGO53_RS28985 () | 108696..108947 | + | 252 | WP_142816513.1 | antitoxin | Antitoxin Detail |
| EGO53_RS28990 () | 108944..109231 | + | 288 | WP_125460859.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EGO53_RS28995 () | 109283..109561 | + | 279 | WP_126502313.1 | hypothetical protein | - |
| EGO53_RS29000 () | 109581..110018 | + | 438 | WP_142816661.1 | hypothetical protein | - |
| EGO53_RS29005 () | 110721..111092 | + | 372 | WP_142816662.1 | dehydrogenase | - |
| EGO53_RS29010 () | 111603..111836 | + | 234 | WP_142816663.1 | hypothetical protein | - |
| EGO53_RS29015 () | 111890..112672 | + | 783 | WP_185959442.1 | hypothetical protein | - |
| EGO53_RS29020 () | 112685..113611 | + | 927 | WP_142816665.1 | hypothetical protein | - |
| EGO53_RS29025 () | 113608..114339 | + | 732 | WP_142816666.1 | 2OG-Fe(II) oxygenase | - |
| EGO53_RS29030 () | 114379..115554 | - | 1176 | WP_142816667.1 | MFS transporter | - |
| EGO53_RS29035 () | 115756..116334 | - | 579 | WP_142816668.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| EGO53_RS29040 () | 116483..119530 | + | 3048 | WP_142816669.1 | Tn3 family transposase ISPsy42 | Transposase |
| EGO53_RS29045 () | 119564..119869 | - | 306 | Protein_126 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| EGO53_RS29050 () | 119869..120978 | - | 1110 | WP_142816670.1 | recombinase RecA | - |
| EGO53_RS29055 () | 121345..121607 | + | 263 | Protein_128 | transcriptional regulator | - |
| EGO53_RS29060 () | 121983..122564 | + | 582 | WP_142816671.1 | ComF family protein | - |
| EGO53_RS29065 () | 122567..123121 | + | 555 | WP_142816672.1 | hypothetical protein | - |
| EGO53_RS29070 () | 123603..124106 | - | 504 | WP_142816673.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|