MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 128915 bp
Accession: NZ_CP033652 Location: 1..128915 Organism: Burkholderia glumae strain YH67 Replicon: plasmid p4_YH67
Accession: NZ_CP033652 Location: 1..128915 Organism: Burkholderia glumae strain YH67 Replicon: plasmid p4_YH67
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFO24_RS02005 | 101..754 | + | 654 | WP_012735260.1 | AAA family ATPase | - |
| EFO24_RS02010 | 757..1779 | + | 1023 | WP_012735261.1 | ParB/RepB/Spo0J family partition protein | - |
| EFO24_RS02015 | 2935..3909 | + | 975 | WP_012735262.1 | replication protein RepA | - |
| EFO24_RS02020 | 3994..4460 | - | 467 | Protein_3 | IS5 family transposase IS1421 | Transposase |
| EFO24_RS02025 | 4935..5933 | + | 999 | WP_012735264.1 | IS110 family transposase ISBfun1 | Transposase |
| EFO24_RS02030 | 6721..7620 | - | 900 | WP_012735265.1 | Crp/Fnr family transcriptional regulator | - |
| EFO24_RS02035 | 8039..9376 | - | 1338 | WP_012735266.1 | DUF1173 domain-containing protein | - |
| EFO24_RS02040 | 9391..9795 | - | 405 | WP_012735267.1 | hypothetical protein | - |
| EFO24_RS02045 | 9808..10476 | - | 669 | WP_012735268.1 | hypothetical protein | - |
| EFO24_RS02050 | 10491..15206 | - | 4716 | WP_012735269.1 | Autotransporter adhesin SadA | VF |
| EFO24_RS02055 | 15331..15954 | - | 624 | WP_012735270.1 | hypothetical protein | - |
| EFO24_RS02060 | 15951..16268 | - | 318 | WP_012735271.1 | hypothetical protein | - |
| EFO24_RS02065 | 16265..16708 | - | 444 | WP_237711060.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| EFO24_RS02070 | 16747..17178 | - | 432 | WP_043308689.1 | hypothetical protein | - |
| EFO24_RS02075 | 17334..17732 | - | 399 | WP_012732812.1 | outer membrane protein assembly factor BamE | - |
| EFO24_RS02080 | 17777..18088 | - | 312 | WP_237711050.1 | hypothetical protein | - |
| EFO24_RS02085 | 18207..20306 | - | 2100 | WP_012735273.1 | zeta toxin family protein | - |
| EFO24_RS02090 | 20318..20566 | - | 249 | WP_232252317.1 | hypothetical protein | - |
| EFO24_RS02095 | 20605..21234 | - | 630 | WP_012735275.1 | hypothetical protein | VF |
| EFO24_RS02100 | 21492..21878 | + | 387 | WP_012735276.1 | hypothetical protein | - |
| EFO24_RS02105 | 21926..25381 | - | 3456 | WP_237711061.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| EFO24_RS02110 | 25384..26829 | - | 1446 | WP_012735278.1 | conjugal transfer protein TraH | - |
| EFO24_RS02115 | 26826..27869 | - | 1044 | WP_012735279.1 | hypothetical protein | - |
| EFO24_RS02120 | 27869..28657 | - | 789 | WP_043308691.1 | conjugal transfer protein TraF | - |
| EFO24_RS02125 | 28791..29267 | - | 477 | WP_043308694.1 | hypothetical protein | - |
| EFO24_RS02130 | 29291..29698 | - | 408 | WP_012735281.1 | hypothetical protein | - |
| EFO24_RS02135 | 29695..30960 | - | 1266 | WP_012735282.1 | conjugal transfer protein TraN | - |
| EFO24_RS02140 | 30957..32255 | - | 1299 | WP_012735283.1 | hypothetical protein | - |
| EFO24_RS02145 | 32255..33046 | - | 792 | WP_012735284.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EFO24_RS02150 | 33043..34020 | - | 978 | WP_085962455.1 | conjugal transfer pilus assembly protein TraU | - |
| EFO24_RS02155 | 34071..35015 | - | 945 | WP_148271085.1 | hypothetical protein | - |
| EFO24_RS02160 | 35082..35720 | - | 639 | WP_012735287.1 | type-F conjugative transfer system protein TraW | - |
| EFO24_RS02165 | 35734..36234 | - | 501 | WP_012735288.1 | S26 family signal peptidase | - |
| EFO24_RS02170 | 36231..36602 | - | 372 | WP_012735289.1 | hypothetical protein | - |
| EFO24_RS02175 | 36599..39199 | - | 2601 | WP_012735290.1 | type IV secretion system protein TraC | - |
| EFO24_RS02180 | 39213..39911 | - | 699 | WP_012732830.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EFO24_RS02185 | 39914..40840 | - | 927 | WP_237711062.1 | DsbC family protein | - |
| EFO24_RS02190 | 41125..42006 | - | 882 | Protein_37 | phage Gp37/Gp68 family protein | - |
| EFO24_RS02195 | 42083..43183 | - | 1101 | WP_012735292.1 | hypothetical protein | - |
| EFO24_RS02200 | 43176..44513 | - | 1338 | WP_012735293.1 | TrbI/VirB10 family protein | - |
| EFO24_RS02205 | 44506..45192 | - | 687 | WP_237711063.1 | type-F conjugative transfer system secretin TraK | - |
| EFO24_RS02210 | 45243..45854 | - | 612 | WP_012735294.1 | type IV conjugative transfer system protein TraE | - |
| EFO24_RS02215 | 45859..46146 | - | 288 | WP_012732837.1 | type IV conjugative transfer system protein TraL | - |
| EFO24_RS02220 | 46156..46545 | - | 390 | WP_012735295.1 | hypothetical protein | - |
| EFO24_RS02225 | 47128..47619 | - | 492 | WP_012735297.1 | hypothetical protein | VF |
| EFO24_RS02230 | 48123..48470 | - | 348 | WP_127913918.1 | hypothetical protein | - |
| EFO24_RS02235 | 48642..49097 | - | 456 | WP_012735298.1 | ester cyclase | - |
| EFO24_RS02240 | 49194..49619 | - | 426 | WP_043308700.1 | MFS transporter | - |
| EFO24_RS02245 | 49709..50526 | + | 818 | WP_085962346.1 | IS5-like element ISBugl2 family transposase | - |
| EFO24_RS02250 | 50501..51409 | - | 909 | WP_080569440.1 | MFS transporter | - |
| EFO24_RS02255 | 51602..52489 | + | 888 | WP_230674573.1 | LysR family transcriptional regulator | - |
| EFO24_RS02260 | 52607..57253 | + | 4647 | WP_012735300.1 | hypothetical protein | VF |
| EFO24_RS02265 | 57256..57672 | + | 417 | WP_012732848.1 | SMI1/KNR4 family protein | - |
| EFO24_RS02270 | 57728..57823 | + | 96 | Protein_53 | GNAT family N-acetyltransferase | - |
| EFO24_RS02275 | 57907..58386 | + | 480 | WP_257739424.1 | ProQ/FinO family protein | - |
| EFO24_RS02280 | 58476..61397 | - | 2922 | WP_257739425.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| EFO24_RS02285 | 61407..63473 | - | 2067 | WP_012735302.1 | type IV secretion system DNA-binding domain-containing protein | - |
| EFO24_RS02290 | 63466..63915 | - | 450 | WP_012735303.1 | hypothetical protein | - |
| EFO24_RS02295 | 65091..65687 | - | 597 | WP_148271086.1 | hypothetical protein | - |
| EFO24_RS02300 | 65904..66185 | + | 282 | WP_012732854.1 | hypothetical protein | - |
| EFO24_RS02310 | 66374..66547 | - | 174 | WP_017924466.1 | hypothetical protein | - |
| EFO24_RS02315 | 66602..66955 | - | 354 | WP_017924465.1 | hypothetical protein | - |
| EFO24_RS02320 | 67011..67286 | - | 276 | WP_012735304.1 | hypothetical protein | - |
| EFO24_RS02325 | 67301..67591 | - | 291 | WP_237711057.1 | hypothetical protein | - |
| EFO24_RS02330 | 68275..70509 | - | 2235 | WP_012735306.1 | ParB/RepB/Spo0J family partition protein | - |
| EFO24_RS02335 | 71083..71277 | - | 195 | WP_012735307.1 | hypothetical protein | - |
| EFO24_RS02340 | 71280..71447 | - | 168 | WP_017425460.1 | hypothetical protein | - |
| EFO24_RS02345 | 71778..72284 | - | 507 | WP_012735308.1 | hypothetical protein | - |
| EFO24_RS02350 | 72309..72962 | - | 654 | WP_012735309.1 | DNA methyltransferase | - |
| EFO24_RS02355 | 73670..74326 | - | 657 | WP_012735310.1 | hypothetical protein | - |
| EFO24_RS02360 | 74392..74871 | - | 480 | WP_043308706.1 | hypothetical protein | - |
| EFO24_RS02365 | 75647..76123 | + | 477 | WP_012735312.1 | hypothetical protein | - |
| EFO24_RS02370 | 76175..76621 | + | 447 | WP_012735313.1 | hypothetical protein | - |
| EFO24_RS02375 | 76755..77903 | - | 1149 | WP_012735314.1 | DUF3560 domain-containing protein | - |
| EFO24_RS02380 | 78697..81030 | + | 2334 | WP_237711058.1 | AAA family ATPase | - |
| EFO24_RS02385 | 81027..82985 | + | 1959 | WP_012735316.1 | UvrD-helicase domain-containing protein | - |
| EFO24_RS02390 | 83481..83966 | + | 486 | Protein_76 | ISNCY family transposase ISLad2 | Transposase |
| EFO24_RS02395 | 84232..85878 | + | 1647 | WP_193373183.1 | hypothetical protein | - |
| EFO24_RS02400 | 86543..86953 | - | 411 | WP_148271087.1 | hypothetical protein | - |
| EFO24_RS02405 | 87505..88170 | - | 666 | WP_012735319.1 | gamma-mobile-trio protein GmtX | - |
| EFO24_RS02410 | 88167..90773 | - | 2607 | WP_012735320.1 | VPA1269 family protein | - |
| EFO24_RS02415 | 90766..92181 | - | 1416 | WP_012735321.1 | gamma-mobile-trio recombinase GmtY | - |
| EFO24_RS02420 | 92266..93528 | - | 1263 | WP_193373184.1 | MFS transporter | - |
| EFO24_RS02425 | 93479..94243 | - | 765 | WP_012735323.1 | arsenical resistance protein ArsH | - |
| EFO24_RS02430 | 94257..95084 | - | 828 | WP_012735324.1 | arsenic resistance N-acetyltransferase ArsN2 | - |
| EFO24_RS02435 | 95094..96155 | - | 1062 | WP_012735325.1 | ACR3 family arsenite efflux transporter | - |
| EFO24_RS02440 | 96142..96663 | - | 522 | WP_012735326.1 | arsenate reductase ArsC | - |
| EFO24_RS02445 | 96821..97153 | - | 333 | WP_012735327.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| EFO24_RS02450 | 97429..98133 | + | 705 | WP_043308749.1 | translesion DNA synthesis-associated protein ImuA | - |
| EFO24_RS02455 | 98051..99529 | + | 1479 | WP_012735329.1 | DNA polymerase Y family protein | - |
| EFO24_RS02460 | 99536..102685 | + | 3150 | WP_012735330.1 | error-prone DNA polymerase | - |
| EFO24_RS02465 | 102698..102985 | + | 288 | WP_012735331.1 | hypothetical protein | - |
| EFO24_RS02470 | 103532..104626 | - | 1095 | WP_012735332.1 | BsuBI/PstI family type II restriction endonuclease | - |
| EFO24_RS02475 | 104629..106422 | - | 1794 | WP_012735333.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| EFO24_RS02480 | 106426..106662 | - | 237 | WP_012735334.1 | helix-turn-helix transcriptional regulator | - |
| EFO24_RS02485 | 106869..107597 | + | 729 | WP_012735335.1 | IS6 family transposase ISDge13 | Transposase |
| EFO24_RS02490 | 107728..107979 | - | 252 | WP_012735336.1 | hypothetical protein | VF |
| EFO24_RS02495 | 107992..108528 | - | 537 | WP_012735337.1 | hypothetical protein | - |
| EFO24_RS02500 | 108536..109171 | - | 636 | WP_167539782.1 | hypothetical protein | - |
| EFO24_RS02505 | 109183..109434 | - | 252 | WP_012735338.1 | hypothetical protein | VF |
| EFO24_RS02510 | 109447..110109 | - | 663 | WP_012735339.1 | hypothetical protein | - |
| EFO24_RS02515 | 110106..112949 | - | 2844 | WP_012735340.1 | glycosyl hydrolase 108 family protein | - |
| EFO24_RS02520 | 113002..115509 | - | 2508 | WP_012735341.1 | type VI secretion system Vgr family protein | - |
| EFO24_RS02525 | 115916..116644 | - | 729 | WP_012735342.1 | IS6 family transposase ISDge13 | Transposase |
| EFO24_RS02530 | 117111..117794 | + | 684 | WP_043308718.1 | hypothetical protein | - |
| EFO24_RS02535 | 117791..119302 | + | 1512 | WP_050811485.1 | hypothetical protein | - |
| EFO24_RS02540 | 119388..119657 | + | 270 | WP_012735343.1 | hypothetical protein | - |
| EFO24_RS02545 | 119817..120431 | + | 615 | Protein_107 | error-prone DNA polymerase | - |
| EFO24_RS02550 | 120447..120734 | + | 288 | WP_012735344.1 | hypothetical protein | - |
| EFO24_RS02555 | 121838..122032 | - | 195 | WP_124837731.1 | hypothetical protein | - |
| EFO24_RS02560 | 122087..122329 | - | 243 | WP_012735345.1 | hypothetical protein | - |
| EFO24_RS02565 | 122347..122910 | - | 564 | WP_012735346.1 | hypothetical protein | - |
| EFO24_RS02570 | 122925..123326 | - | 402 | WP_012735347.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EFO24_RS02575 | 123326..123562 | - | 237 | WP_012735348.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| EFO24_RS02580 | 123899..124588 | - | 690 | WP_257739423.1 | hypothetical protein | - |
| EFO24_RS02585 | 124675..126501 | - | 1827 | WP_012735349.1 | site-specific integrase | - |
| EFO24_RS02590 | 126498..126878 | - | 381 | WP_080569442.1 | hypothetical protein | - |
| EFO24_RS02595 | 126881..127198 | - | 318 | WP_050811486.1 | hypothetical protein | - |
| EFO24_RS02600 | 127249..128337 | - | 1089 | Protein_118 | hypothetical protein | - |
| EFO24_RS02605 | 128348..128611 | - | 264 | WP_148271091.1 | hypothetical protein | - |
| EFO24_RS02610 | 128661..128894 | - | 234 | WP_043308726.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|