MGE detailed information
MGE type: Genomic_island MGE length: 40950 bp
Accession: NZ_CP033515 Location: 2186736..2227685 Organism: Vibrio cholerae strain E4 Replicon: chromosome
Accession: NZ_CP033515 Location: 2186736..2227685 Organism: Vibrio cholerae strain E4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EEL44_RS16700 () | 2182001..2186563 | - | 4563 | WP_000702220.1 | accessory colonization factor AcfD | - |
| EEL44_RS16705 () | 2186736..2187383 | + | 648 | WP_001173022.1 | accessory colonization factor AcfA | - |
| EEL44_RS16710 () | 2187386..2188294 | - | 909 | WP_001880634.1 | M23 family metallopeptidase | - |
| EEL44_RS16715 () | 2188303..2188776 | - | 474 | WP_000287237.1 | RDD family protein | - |
| EEL44_RS16720 () | 2188792..2189562 | - | 771 | WP_001880633.1 | accessory colonization factor AcfC | - |
| EEL44_RS16725 () | 2189568..2191448 | - | 1881 | WP_000672505.1 | methyl-accepting chemotaxis protein AcfB | - |
| EEL44_RS16730 () | 2191455..2192216 | - | 762 | WP_000456980.1 | toxin-coregulated pilus pre-pilin peptidase TcpJ | - |
| EEL44_RS16735 () | 2192216..2193046 | - | 831 | WP_000579582.1 | pilus/toxin transcriptional regulator ToxT | - |
| EEL44_RS16740 () | 2193253..2194268 | - | 1016 | Protein_1921 | colonization factor TcpF | - |
| EEL44_RS16745 () | 2194278..2195300 | - | 1023 | WP_000691946.1 | toxin-coregulated pilus assembly protein TcpE | - |
| EEL44_RS16750 () | 2195275..2196786 | - | 1512 | WP_000020697.1 | toxin-coregulated pilus assembly ATPase TcpT | - |
| EEL44_RS16755 () | 2196776..2197234 | - | 459 | WP_001022338.1 | toxin-coregulated pilus protein TcpS | - |
| EEL44_RS16760 () | 2197250..2198086 | - | 837 | WP_001880631.1 | toxin-coregulated pilus protein TcpD | - |
| EEL44_RS16765 () | 2198074..2198529 | - | 456 | WP_000200904.1 | toxin-coregulated pilus protein TcpR | - |
| EEL44_RS16770 () | 2198522..2199990 | - | 1469 | Protein_1927 | toxin-coregulated pilus secretin TcpC | - |
| EEL44_RS16775 () | 2199993..2200445 | - | 453 | WP_000742753.1 | toxin-coregulated pilus protein TcpQ | - |
| EEL44_RS16780 () | 2200445..2201737 | - | 1293 | WP_001234004.1 | toxin-coregulated pilus minor pilin TcpB | - |
| EEL44_RS16785 () | 2201817..2202491 | - | 675 | WP_001176374.1 | toxin-coregulated pilus major pilin TcpA | - |
| EEL44_RS16790 () | 2203035..2203445 | - | 411 | WP_000549073.1 | toxin-coregulated pilus protein TcpH | - |
| EEL44_RS16795 () | 2203430..2204095 | - | 666 | WP_000542596.1 | toxin-coregulated pilus transcriptional regulator TcpP | - |
| EEL44_RS16800 () | 2204536..2206398 | + | 1863 | WP_000591844.1 | toxin-coregulated pilus methyl-accepting chemotaxis protein TcpI | - |
| EEL44_RS16805 () | 2206674..2207168 | - | 495 | WP_000218964.1 | thiol peroxidase | - |
| EEL44_RS16810 () | 2207278..2208216 | - | 939 | WP_001232137.1 | hypothetical protein | - |
| EEL44_RS16815 () | 2208213..2212814 | - | 4602 | WP_000482254.1 | membrane protein | - |
| EEL44_RS16820 () | 2212927..2215968 | - | 3042 | WP_001880619.1 | fibronectin type III domain-containing protein | - |
| EEL44_RS16825 () | 2216148..2217668 | + | 1521 | WP_000640055.1 | aldehyde dehydrogenase | - |
| EEL44_RS16830 () | 2218010..2218690 | + | 681 | Protein_1939 | IS5 family transposase | - |
| EEL44_RS16835 () | 2218716..2219693 | - | 978 | WP_001889101.1 | IS481-like element ISVch1 family transposase | - |
| EEL44_RS16845 () | 2220297..2221658 | + | 1362 | WP_000392003.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| EEL44_RS16850 () | 2221655..2222122 | + | 468 | WP_000804849.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| EEL44_RS16855 () | 2222550..2223128 | + | 579 | WP_000109982.1 | class I SAM-dependent methyltransferase | - |
| EEL44_RS16860 () | 2223132..2226068 | + | 2937 | WP_001283872.1 | DEAD/DEAH box helicase family protein | - |
| EEL44_RS16865 () | 2226138..2226842 | + | 705 | WP_001880605.1 | NERD domain-containing protein | - |
| EEL44_RS16870 () | 2227176..2227685 | - | 510 | WP_001077909.1 | hypothetical protein | - |
| EEL44_RS16880 () | 2227883..2229562 | - | 1680 | WP_001139117.1 | SWIM zinc finger domain-containing protein | - |
| EEL44_RS16890 () | 2229785..2230468 | + | 684 | WP_000841479.1 | MFS transporter | - |
| EEL44_RS16895 () | 2230536..2232152 | - | 1617 | WP_000620446.1 | NAD(P)/FAD-dependent oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|