MGE detailed information
MGE type: IS/Tn MGE length: 1200 bp
Accession: NZ_CP033427 Location: 4232371..4233570 Organism: Mycobacterium avium subsp. paratuberculosis strain MAPK_CN9/15 Replicon: chromosome
Accession: NZ_CP033427 Location: 4232371..4233570 Organism: Mycobacterium avium subsp. paratuberculosis strain MAPK_CN9/15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC390_RS20345 () | 4228191..4229033 | - | 843 | WP_003876741.1 | carbohydrate ABC transporter permease | - |
| EC390_RS20350 () | 4229020..4229964 | - | 945 | WP_003878033.1 | sugar ABC transporter permease | - |
| EC390_RS20355 () | 4229961..4231289 | - | 1329 | WP_003876743.1 | sugar ABC transporter substrate-binding protein | - |
| EC390_RS20360 () | 4231355..4232290 | - | 936 | WP_010949351.1 | sigma-70 family RNA polymerase sigma factor | - |
| EC390_RS20365 () | 4232371..4233591 | - | 1221 | WP_010948702.1 | IS110 family transposase IS900 | Transposase |
| EC390_RS20375 () | 4233911..4234261 | + | 351 | WP_003878038.1 | DoxX family protein | - |
| EC390_RS20380 () | 4234275..4235075 | - | 801 | WP_003876746.1 | nuclear transport factor 2 family protein | - |
| EC390_RS20385 () | 4235075..4235635 | - | 561 | WP_003878040.1 | pyrazinamidase PncA | - |
| EC390_RS20390 () | 4235746..4236813 | + | 1068 | WP_010949354.1 | DoxX family membrane protein | - |
| EC390_RS20395 () | 4236818..4237396 | - | 579 | WP_003876749.1 | zeta toxin family protein | Toxin Detail |
| EC390_RS20400 () | 4237427..4237816 | - | 390 | WP_003878042.1 | hypothetical protein | Antitoxin Detail |
| EC390_RS20405 () | 4237897..4238391 | - | 495 | WP_010949355.1 | gluconokinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|