MGE detailed information
MGE type: Prophage MGE length: 37399 bp
Accession: NZ_CP032992 Location: 3567662..3605060 Organism: Escherichia coli strain W5-6 Replicon: chromosome
Accession: NZ_CP032992 Location: 3567662..3605060 Organism: Escherichia coli strain W5-6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9V54_RS17610 () | 3563180..3563638 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| D9V54_RS17615 () | 3563899..3565356 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| D9V54_RS17620 () | 3565413..3565934 | - | 522 | Protein_3379 | peptide chain release factor H | - |
| D9V54_RS17625 () | 3565930..3566136 | - | 207 | Protein_3380 | RtcB family protein | - |
| D9V54_RS17630 () | 3566454..3566906 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| D9V54_RS17635 () | 3566916..3567314 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | - |
| D9V54_RS17640 () | 3567317..3567610 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | - |
| D9V54_RS17645 () | 3567662..3568717 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| D9V54_RS17650 () | 3568788..3569573 | - | 786 | WP_000207552.1 | hypothetical protein | VF |
| D9V54_RS17655 () | 3569545..3571257 | + | 1713 | Protein_3386 | hypothetical protein | VF |
| D9V54_RS17660 () | 3571481..3571978 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| D9V54_RS17665 () | 3572154..3572903 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| D9V54_RS17670 () | 3573113..3573373 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| D9V54_RS17675 () | 3573376..3573654 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| D9V54_RS17680 () | 3573810..3574550 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| D9V54_RS17685 () | 3574521..3575288 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| D9V54_RS17690 () | 3575494..3576072 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| D9V54_RS17695 () | 3576312..3578756 | + | 2445 | WP_000973083.1 | hypothetical protein | VF |
| D9V54_RS17700 () | 3578799..3579245 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| D9V54_RS17705 () | 3579426..3580196 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| D9V54_RS17710 () | 3580237..3581373 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| D9V54_RS17715 () | 3581804..3582196 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| D9V54_RS17720 () | 3583299..3585314 | - | 2016 | Protein_3399 | hypothetical protein | VF |
| D9V54_RS17730 () | 3585524..3586042 | - | 519 | WP_001142958.1 | hypothetical protein | VF |
| D9V54_RS17735 () | 3586737..3587237 | + | 501 | WP_000037397.1 | hypothetical protein | VF |
| D9V54_RS17740 () | 3587272..3587496 | + | 225 | WP_000123970.1 | hypothetical protein | - |
| D9V54_RS17745 () | 3587547..3588416 | + | 870 | Protein_3403 | hypothetical protein | VF |
| D9V54_RS17750 () | 3588474..3589171 | + | 698 | Protein_3404 | IS1 family transposase IS1R | Transposase |
| D9V54_RS17755 () | 3589165..3589338 | - | 174 | WP_162842419.1 | hypothetical protein | - |
| D9V54_RS17765 () | 3589875..3590606 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| D9V54_RS17770 () | 3590671..3591138 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| D9V54_RS17775 () | 3591135..3591857 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| D9V54_RS17780 () | 3591891..3592646 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| D9V54_RS17785 () | 3592718..3594076 | + | 1359 | WP_000644685.1 | hypothetical protein | VF |
| D9V54_RS17790 () | 3594124..3594720 | - | 597 | Protein_3411 | methyltransferase domain-containing protein | - |
| D9V54_RS17795 () | 3594751..3595551 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| D9V54_RS17800 () | 3595792..3596706 | + | 915 | WP_000648572.1 | hypothetical protein | VF |
| D9V54_RS17805 () | 3596703..3597506 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
| D9V54_RS17840 () | 3603266..3603841 | - | 576 | WP_001140187.1 | hypothetical protein | VF |
| D9V54_RS17845 () | 3604029..3605060 | + | 1032 | WP_000594006.1 | hypothetical protein | VF |
| D9V54_RS17850 () | 3605053..3605706 | + | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| D9V54_RS17855 () | 3605746..3606561 | + | 816 | WP_000874226.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
| D9V54_RS17860 () | 3606679..3607083 | + | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| D9V54_RS17865 () | 3607080..3607787 | + | 708 | WP_000094011.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| D9V54_RS17870 () | 3607899..3609617 | + | 1719 | WP_001260712.1 | proline--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|