MGE detailed information
MGE type: Prophage MGE length: 63077 bp
Accession: NZ_CP032879 Location: 355840..418916 Organism: Escherichia coli strain WCHEC000837 Replicon: chromosome
Accession: NZ_CP032879 Location: 355840..418916 Organism: Escherichia coli strain WCHEC000837 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9N32_RS03550 () | 351433..351636 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| D9N32_RS03555 () | 351672..353132 | - | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| D9N32_RS03560 () | 353221..354504 | - | 1284 | Protein_317 | MHS family MFS transporter YdfJ | - |
| D9N32_RS27455 () | 355108..355221 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| D9N32_RS03565 () | 355290..355523 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| D9N32_RS03570 () | 355840..356430 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| D9N32_RS03575 () | 356528..356638 | - | 111 | Protein_321 | tail fiber assembly protein | - |
| D9N32_RS03580 () | 356658..356951 | - | 294 | WP_000355609.1 | hypothetical protein | - |
| D9N32_RS03585 () | 356962..357666 | - | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| D9N32_RS03590 () | 357676..357957 | - | 282 | WP_000654154.1 | hypothetical protein | - |
| D9N32_RS03595 () | 357954..360353 | - | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| D9N32_RS03600 () | 360418..361017 | - | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| D9N32_RS03605 () | 361085..364564 | - | 3480 | WP_021523093.1 | host specificity protein J | - |
| D9N32_RS03610 () | 364625..365227 | - | 603 | WP_049286672.1 | tail assembly protein | - |
| D9N32_RS03615 () | 365164..365907 | - | 744 | WP_032153655.1 | C40 family peptidase | - |
| D9N32_RS03620 () | 365913..366611 | - | 699 | WP_029702161.1 | phage minor tail protein L | - |
| D9N32_RS03625 () | 366611..366940 | - | 330 | WP_000847345.1 | phage tail protein | - |
| D9N32_RS03630 () | 366937..369498 | - | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| D9N32_RS03635 () | 369491..369925 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| D9N32_RS03640 () | 369907..370329 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| D9N32_RS03645 () | 370345..371085 | - | 741 | WP_001349920.1 | phage tail protein | - |
| D9N32_RS03650 () | 371093..371488 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| D9N32_RS03655 () | 371485..372063 | - | 579 | WP_000975070.1 | phage tail protein | - |
| D9N32_RS03660 () | 372075..372428 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| D9N32_RS03665 () | 372440..372838 | - | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| D9N32_RS03670 () | 372880..373905 | - | 1026 | WP_000063277.1 | major capsid protein | - |
| D9N32_RS03675 () | 373960..374292 | - | 333 | WP_001708751.1 | head decoration protein | - |
| D9N32_RS03680 () | 374302..375621 | - | 1320 | WP_020233915.1 | S49 family peptidase | - |
| D9N32_RS03685 () | 375602..377203 | - | 1602 | WP_001356819.1 | phage portal protein | - |
| D9N32_RS03690 () | 377200..377406 | - | 207 | WP_000198149.1 | gpW family protein | - |
| D9N32_RS03695 () | 377403..379328 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| D9N32_RS03700 () | 379303..379848 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| D9N32_RS03705 () | 380237..380470 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| D9N32_RS03710 () | 380528..380938 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| D9N32_RS03715 () | 381090..381263 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| D9N32_RS27460 () | 381435..381590 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| D9N32_RS27465 () | 381670..381735 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| D9N32_RS03725 () | 381738..381926 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| D9N32_RS03730 () | 381937..382149 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| D9N32_RS03735 () | 382512..383009 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| D9N32_RS03740 () | 383006..383539 | - | 534 | WP_001092971.1 | lysozyme | - |
| D9N32_RS03745 () | 383536..383847 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| D9N32_RS03750 () | 383852..384067 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| D9N32_RS03760 () | 384624..385082 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| D9N32_RS03770 () | 385533..385748 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| D9N32_RS03775 () | 386049..386261 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| D9N32_RS27470 () | 386316..386405 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| D9N32_RS03780 () | 386683..387435 | - | 753 | WP_001047135.1 | antitermination protein | - |
| D9N32_RS03785 () | 387449..388498 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| D9N32_RS03790 () | 388500..388778 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| D9N32_RS03795 () | 388845..389096 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| D9N32_RS03800 () | 389313..389468 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| D9N32_RS03805 () | 389540..389827 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| D9N32_RS03810 () | 389827..390066 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| D9N32_RS03815 () | 390091..390396 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| D9N32_RS03820 () | 390599..390931 | + | 333 | WP_001301033.1 | protein FlxA | - |
| D9N32_RS03825 () | 391368..392681 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| D9N32_RS03830 () | 393165..394193 | - | 1029 | WP_001345551.1 | DUF4868 domain-containing protein | - |
| D9N32_RS03835 () | 394190..394804 | - | 615 | WP_001265627.1 | hypothetical protein | - |
| D9N32_RS03840 () | 395013..395678 | - | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| D9N32_RS03845 () | 395881..396279 | - | 399 | WP_001151242.1 | DUF977 family protein | - |
| D9N32_RS03850 () | 396320..397285 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| D9N32_RS03855 () | 397266..397787 | - | 522 | WP_000705355.1 | hypothetical protein | - |
| D9N32_RS03860 () | 397771..397998 | - | 228 | WP_000921596.1 | transcriptional regulator | - |
| D9N32_RS03865 () | 398079..398486 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| D9N32_RS03870 () | 398655..398810 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| D9N32_RS03875 () | 398812..399387 | + | 576 | WP_148240173.1 | hypothetical protein | - |
| D9N32_RS03880 () | 399874..400062 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| D9N32_RS03885 () | 400059..400250 | + | 192 | WP_001083276.1 | lysis protein YdfD | - |
| D9N32_RS03890 () | 400344..402815 | + | 2472 | WP_000048363.1 | exonuclease | - |
| D9N32_RS03895 () | 402888..403139 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| D9N32_RS03905 () | 403210..403887 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| D9N32_RS03910 () | 403887..404234 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| D9N32_RS03915 () | 404254..405825 | + | 1572 | WP_087565618.1 | IS66 family transposase ISCro1 | Transposase |
| D9N32_RS03920 () | 405881..407161 | + | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| D9N32_RS03925 () | 407163..407291 | - | 129 | WP_001389342.1 | hypothetical protein | - |
| D9N32_RS03930 () | 407349..408368 | - | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| D9N32_RS03935 () | 408380..409594 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| D9N32_RS03940 () | 409800..410126 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| D9N32_RS03945 () | 410261..410602 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| D9N32_RS03950 () | 410637..411197 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| D9N32_RS03955 () | 411200..411910 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| D9N32_RS03960 () | 412018..412323 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| D9N32_RS03965 () | 412522..414948 | + | 2427 | WP_001551145.1 | dimethyl sulfoxide reductase subunit A | - |
| D9N32_RS03970 () | 415009..417432 | + | 2424 | WP_072170800.1 | dimethyl sulfoxide reductase subunit A | - |
| D9N32_RS03975 () | 417443..418060 | + | 618 | WP_001520568.1 | dimethylsulfoxide reductase subunit B | - |
| D9N32_RS03980 () | 418062..418916 | + | 855 | WP_020233477.1 | dimethyl sulfoxide reductase anchor subunit | - |
| D9N32_RS03985 () | 418959..419573 | + | 615 | WP_001520571.1 | Tat proofreading chaperone DmsD | - |
| D9N32_RS03990 () | 419732..421024 | + | 1293 | WP_071593650.1 | voltage-gated ClC-type chloride channel ClcB | - |
| D9N32_RS03995 () | 420977..421672 | - | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| D9N32_RS04000 () | 421797..423017 | - | 1221 | WP_021523109.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|