MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 90979 bp
Accession: NZ_CP032812 Location: 1..90979 Organism: Escherichia coli strain ERL03-1416 Replicon: plasmid pERL03-1416-1
Accession: NZ_CP032812 Location: 1..90979 Organism: Escherichia coli strain ERL03-1416 Replicon: plasmid pERL03-1416-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8Z67_RS27345 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| D8Z67_RS27360 () | 1782..2066 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| D8Z67_RS27365 () | 2066..2341 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D8Z67_RS27370 () | 2436..2642 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| D8Z67_RS27375 () | 2742..2957 | - | 216 | Protein_5 | transposase | - |
| D8Z67_RS27380 () | 3001..3567 | - | 567 | Protein_6 | IS3 family transposase ISSd1 | Transposase |
| D8Z67_RS27385 () | 3567..3983 | - | 417 | Protein_7 | IS91 family transposase | - |
| D8Z67_RS27390 () | 3983..4168 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| D8Z67_RS27395 () | 4345..6555 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| D8Z67_RS27400 () | 6599..6988 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| D8Z67_RS27405 () | 7045..8033 | + | 989 | Protein_11 | IS3 family transposase IS629 | Transposase |
| D8Z67_RS27415 () | 8214..12116 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| D8Z67_RS27420 () | 12372..12853 | - | 482 | Protein_13 | IS1 family transposase IS1N | Transposase |
| D8Z67_RS27430 () | 14295..15116 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| D8Z67_RS27435 () | 15116..16222 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| D8Z67_RS27440 () | 16312..18033 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| D8Z67_RS27445 () | 18107..19105 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| D8Z67_RS27450 () | 19158..19346 | + | 189 | Protein_18 | hypothetical protein | - |
| D8Z67_RS27455 () | 19473..19853 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| D8Z67_RS27460 () | 19850..20197 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| D8Z67_RS27465 () | 20247..21785 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| D8Z67_RS28540 () | 21900..21986 | - | 87 | Protein_22 | IS3 family transposase ISEhe3 | Transposase |
| D8Z67_RS27475 () | 22439..25135 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| D8Z67_RS27480 () | 25222..26097 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| D8Z67_RS27485 () | 26098..28065 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| D8Z67_RS27490 () | 28065..29570 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| D8Z67_RS27495 () | 29572..30795 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| D8Z67_RS27500 () | 30826..31260 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| D8Z67_RS27505 () | 31257..31811 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| D8Z67_RS27510 () | 31826..32173 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| D8Z67_RS27515 () | 32170..32769 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| D8Z67_RS27520 () | 32766..33743 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| D8Z67_RS27525 () | 33782..34954 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| D8Z67_RS27530 () | 34941..35453 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| D8Z67_RS27535 () | 35511..36344 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| D8Z67_RS27540 () | 36436..36837 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| D8Z67_RS27545 () | 37016..38187 | + | 1172 | Protein_37 | IS3 family transposase ISLad1 | Transposase |
| D8Z67_RS27555 () | 38728..39243 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| D8Z67_RS27560 () | 39245..42241 | + | 2997 | WP_000217733.1 | Hemolysin, chromosomal | VF |
| D8Z67_RS27565 () | 42291..44411 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| D8Z67_RS27570 () | 44415..45854 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| D8Z67_RS28545 () | 45975..46467 | + | 493 | Protein_42 | Transcriptional repressor MprA | VF |
| D8Z67_RS27590 () | 46598..46828 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| D8Z67_RS27595 () | 46949..47689 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| D8Z67_RS27600 () | 47974..48951 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| D8Z67_RS27610 () | 49359..49559 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| D8Z67_RS27615 () | 49556..50176 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| D8Z67_RS27620 () | 50173..50856 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| D8Z67_RS27625 () | 51315..51533 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| D8Z67_RS27630 () | 51535..51840 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| D8Z67_RS27635 () | 51841..52647 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| D8Z67_RS27640 () | 52763..53125 | + | 363 | Protein_52 | RepB family plasmid replication initiator protein | - |
| D8Z67_RS27645 () | 53713..54879 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| D8Z67_RS27650 () | 54879..55850 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| D8Z67_RS27665 () | 56545..57447 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| D8Z67_RS27670 () | 57451..57756 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| D8Z67_RS27675 () | 57833..58516 | + | 684 | WP_000085945.1 | DNA methylase | - |
| D8Z67_RS27680 () | 58517..58738 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| D8Z67_RS27685 () | 58632..59186 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| D8Z67_RS28550 () | 59232..60008 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| D8Z67_RS27700 () | 60549..60851 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| D8Z67_RS27705 () | 60898..61320 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| D8Z67_RS27710 () | 61317..61508 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| D8Z67_RS28555 () | 61478..61987 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| D8Z67_RS27725 () | 62504..62734 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| D8Z67_RS27730 () | 62786..64147 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| D8Z67_RS27735 () | 64194..64757 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| D8Z67_RS27740 () | 64843..65292 | - | 450 | WP_001451816.1 | hypothetical protein | - |
| D8Z67_RS27745 () | 65362..65568 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| D8Z67_RS27750 () | 65594..66046 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| D8Z67_RS27755 () | 66103..66336 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| D8Z67_RS27760 () | 66402..68360 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| D8Z67_RS27765 () | 68415..68849 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| D8Z67_RS27770 () | 68846..69607 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 69576..69774 | + | 199 | NuclAT_0 | - | - |
| - () | 69576..69774 | + | 199 | NuclAT_0 | - | - |
| - () | 69576..69774 | + | 199 | NuclAT_0 | - | - |
| - () | 69576..69774 | + | 199 | NuclAT_0 | - | - |
| D8Z67_RS27775 () | 69839..69997 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| D8Z67_RS27780 () | 70131..72152 | + | 2022 | Protein_76 | hypothetical protein | Relaxase |
| D8Z67_RS27785 () | 72220..72651 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| D8Z67_RS27795 () | 73295..73644 | - | 350 | Protein_78 | IS3 family transposase IS3H | Transposase |
| D8Z67_RS27800 () | 73738..74001 | + | 264 | Protein_79 | IS21 family transposase ISEc62 | Transposase |
| D8Z67_RS27805 () | 74041..74161 | + | 121 | Protein_80 | IS21 family transposase ISEc62 | Transposase |
| D8Z67_RS27810 () | 74158..74310 | + | 153 | Protein_81 | IS1 family transposase | - |
| D8Z67_RS27815 () | 74417..83926 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| D8Z67_RS27820 () | 84000..84224 | + | 225 | Protein_83 | IS3 family transposase IS3H | Transposase |
| D8Z67_RS27825 () | 84292..84462 | - | 171 | Protein_84 | IS3 family transposase IS1203 | Transposase |
| D8Z67_RS27830 () | 84469..84720 | - | 252 | Protein_85 | IS3 family transposase IS1203 | Transposase |
| D8Z67_RS27835 () | 84777..86165 | + | 1389 | Protein_86 | Multifunctional conjugation protein TraI | Relaxase |
| D8Z67_RS27840 () | 86185..86931 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| D8Z67_RS27845 () | 86990..87850 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| D8Z67_RS27850 () | 87953..88513 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| D8Z67_RS27855 () | 88646..88858 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| D8Z67_RS27860 () | 89103..89564 | + | 462 | WP_001233856.1 | thermonuclease family protein | - |
| D8Z67_RS27865 () | 89610..89819 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| D8Z67_RS27870 () | 89857..90195 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| D8Z67_RS27875 () | 90435..90689 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|