MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92771 bp
Accession: NZ_CP032809 Location: 1..92771 Organism: Escherichia coli strain ERL04-3476 Replicon: plasmid pERL04-3476-1
Accession: NZ_CP032809 Location: 1..92771 Organism: Escherichia coli strain ERL04-3476 Replicon: plasmid pERL04-3476-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8Z68_RS28350 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| D8Z68_RS28365 () | 1783..2067 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| D8Z68_RS28370 () | 2067..2342 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D8Z68_RS28375 () | 2437..2643 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| D8Z68_RS28380 () | 2743..2958 | - | 216 | Protein_5 | transposase | - |
| D8Z68_RS28385 () | 3002..3568 | - | 567 | Protein_6 | IS3 family transposase ISSd1 | Transposase |
| D8Z68_RS28390 () | 3568..3984 | - | 417 | Protein_7 | IS91 family transposase | - |
| D8Z68_RS28395 () | 3984..4169 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| D8Z68_RS28400 () | 4346..6556 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| D8Z68_RS28405 () | 6600..6989 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| D8Z68_RS28410 () | 7046..8034 | + | 989 | Protein_11 | IS3 family transposase IS629 | Transposase |
| D8Z68_RS28415 () | 8073..8912 | + | 840 | Protein_12 | Serine protease EspP | VF |
| D8Z68_RS28420 () | 8952..10490 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| D8Z68_RS28425 () | 10540..10887 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| D8Z68_RS28430 () | 10884..11264 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| D8Z68_RS28435 () | 11357..14065 | + | 2709 | Protein_16 | Serine protease EspP | VF |
| D8Z68_RS28440 () | 14321..14802 | - | 482 | Protein_17 | IS1 family transposase IS1N | Transposase |
| D8Z68_RS28450 () | 16243..17064 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| D8Z68_RS28455 () | 17064..18170 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| D8Z68_RS28460 () | 18260..19981 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| D8Z68_RS28465 () | 20055..21053 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| D8Z68_RS28470 () | 21106..21294 | + | 189 | Protein_22 | hypothetical protein | - |
| D8Z68_RS29545 () | 21398..21484 | - | 87 | Protein_23 | IS3 family transposase ISEhe3 | Transposase |
| D8Z68_RS28480 () | 21934..24630 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| D8Z68_RS28485 () | 24717..25592 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| D8Z68_RS28490 () | 25593..27560 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| D8Z68_RS28495 () | 27560..29065 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| D8Z68_RS28500 () | 29067..30290 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| D8Z68_RS28505 () | 30321..30755 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| D8Z68_RS28510 () | 30752..31306 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| D8Z68_RS28515 () | 31321..31668 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| D8Z68_RS28520 () | 31665..32264 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| D8Z68_RS28525 () | 32261..33238 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| D8Z68_RS28530 () | 33277..34449 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| D8Z68_RS28535 () | 34436..34948 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| D8Z68_RS28540 () | 35006..35839 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| D8Z68_RS28545 () | 35931..36332 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| D8Z68_RS28550 () | 36511..37682 | + | 1172 | Protein_38 | IS3 family transposase ISLad1 | Transposase |
| D8Z68_RS28560 () | 38223..38738 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| D8Z68_RS28565 () | 38740..41736 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| D8Z68_RS28570 () | 41786..43906 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| D8Z68_RS28575 () | 43910..45349 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| D8Z68_RS29550 () | 45470..45962 | + | 493 | Protein_43 | Transcriptional repressor MprA | VF |
| D8Z68_RS28595 () | 46093..46323 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| D8Z68_RS28600 () | 46444..47184 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| D8Z68_RS28605 () | 47469..48446 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| D8Z68_RS28615 () | 48854..49054 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| D8Z68_RS28620 () | 49051..49671 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| D8Z68_RS28625 () | 49668..50351 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| D8Z68_RS28630 () | 50810..51028 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| D8Z68_RS28635 () | 51030..51335 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| D8Z68_RS28640 () | 51336..52142 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| D8Z68_RS28655 () | 54154..54909 | + | 756 | WP_000852148.1 | replication initiation protein RepE | - |
| D8Z68_RS28660 () | 55497..56663 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| D8Z68_RS28665 () | 56663..57634 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| D8Z68_RS28680 () | 58329..59231 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| D8Z68_RS28685 () | 59235..59540 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| D8Z68_RS28690 () | 59617..60300 | + | 684 | WP_000085945.1 | DNA methylase | - |
| D8Z68_RS28695 () | 60301..60522 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| D8Z68_RS28700 () | 60416..60970 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| D8Z68_RS29555 () | 61016..61792 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| D8Z68_RS28715 () | 62333..62635 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| D8Z68_RS28720 () | 62682..63104 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| D8Z68_RS28725 () | 63101..63292 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| D8Z68_RS29560 () | 63262..63771 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| D8Z68_RS28740 () | 64288..64518 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| D8Z68_RS28745 () | 64570..65931 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| D8Z68_RS28750 () | 65978..66541 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| D8Z68_RS28755 () | 66627..67070 | - | 444 | WP_001492078.1 | hypothetical protein | - |
| D8Z68_RS28760 () | 67140..67346 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| D8Z68_RS28765 () | 67372..67824 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| D8Z68_RS28770 () | 67881..68114 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| D8Z68_RS28775 () | 68180..70138 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| D8Z68_RS28780 () | 70193..70627 | + | 435 | WP_000845909.1 | conjugation system SOS inhibitor PsiB | - |
| D8Z68_RS28785 () | 70624..71385 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 71354..71552 | + | 199 | NuclAT_0 | - | - |
| - () | 71354..71552 | + | 199 | NuclAT_0 | - | - |
| - () | 71354..71552 | + | 199 | NuclAT_0 | - | - |
| - () | 71354..71552 | + | 199 | NuclAT_0 | - | - |
| D8Z68_RS28790 () | 71617..71775 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| D8Z68_RS28795 () | 71909..73930 | + | 2022 | Protein_78 | hypothetical protein | Relaxase |
| D8Z68_RS28800 () | 73998..74429 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| D8Z68_RS28810 () | 75087..75436 | - | 350 | Protein_80 | IS3 family transposase IS3H | Transposase |
| D8Z68_RS28815 () | 75530..75793 | + | 264 | Protein_81 | IS21 family transposase ISEc62 | Transposase |
| D8Z68_RS28820 () | 75833..75953 | + | 121 | Protein_82 | IS21 family transposase ISEc62 | Transposase |
| D8Z68_RS28825 () | 75950..76102 | + | 153 | Protein_83 | IS1 family transposase | - |
| D8Z68_RS28830 () | 76209..85718 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| D8Z68_RS28835 () | 85792..86016 | + | 225 | Protein_85 | IS3 family transposase IS3H | Transposase |
| D8Z68_RS28840 () | 86084..86254 | - | 171 | Protein_86 | IS3 family transposase IS1203 | Transposase |
| D8Z68_RS28845 () | 86261..86512 | - | 252 | Protein_87 | IS3 family transposase IS1203 | Transposase |
| D8Z68_RS28850 () | 86569..87957 | + | 1389 | Protein_88 | Multifunctional conjugation protein TraI | Relaxase |
| D8Z68_RS28855 () | 87977..88723 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| D8Z68_RS28860 () | 88782..89642 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| D8Z68_RS28865 () | 89745..90305 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| D8Z68_RS28870 () | 90438..90650 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| D8Z68_RS28875 () | 90895..91356 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| D8Z68_RS28880 () | 91402..91611 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| D8Z68_RS28885 () | 91649..91987 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| D8Z68_RS28890 () | 92227..92481 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|