MGE detailed information
MGE type: Prophage MGE length: 47291 bp
Accession: NZ_CP032808 Location: 4487477..4534767 Organism: Escherichia coli strain ERL04-3476 Replicon: chromosome
Accession: NZ_CP032808 Location: 4487477..4534767 Organism: Escherichia coli strain ERL04-3476 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8Z68_RS23245 () | 4483769..4484725 | + | 957 | WP_000121344.1 | molybdenum cofactor insertion chaperone PaoD | - |
| D8Z68_RS23250 () | 4484904..4486031 | - | 1128 | WP_000171065.1 | MFS transporter | - |
| D8Z68_RS23255 () | 4486173..4487231 | - | 1059 | WP_001303808.1 | alpha/beta hydrolase | - |
| D8Z68_RS23260 () | 4487477..4488379 | + | 903 | WP_010917758.1 | Prophage tail fiber assembly protein TfaE | VF |
| D8Z68_RS23270 () | 4489082..4489360 | - | 279 | WP_001301751.1 | hypothetical protein | - |
| D8Z68_RS23275 () | 4489527..4489916 | - | 390 | Protein_4424 | hypothetical protein | VF |
| D8Z68_RS23285 () | 4491225..4491563 | - | 339 | Protein_4426 | Peptidase T | VF |
| D8Z68_RS23290 () | 4491662..4492561 | + | 900 | WP_000687183.1 | 50S ribosomal protein L16 3-hydroxylase | VF |
| D8Z68_RS23295 () | 4493237..4494193 | + | 957 | WP_000205213.1 | hypothetical protein | - |
| D8Z68_RS23300 () | 4494326..4496659 | - | 2334 | WP_000016225.1 | toprim domain-containing protein | - |
| D8Z68_RS23305 () | 4496673..4496996 | - | 324 | WP_000562750.1 | DUF5375 family protein | - |
| D8Z68_RS23310 () | 4496996..4497217 | - | 222 | WP_001071227.1 | hypothetical protein | - |
| D8Z68_RS23315 () | 4497214..4497771 | - | 558 | WP_000973389.1 | host cell division inhibitor Icd-like protein | - |
| D8Z68_RS23320 () | 4497768..4498028 | - | 261 | WP_001244581.1 | AlpA family transcriptional regulator | - |
| D8Z68_RS23325 () | 4498962..4499714 | + | 753 | WP_000154958.1 | septation initiation protein | - |
| D8Z68_RS23330 () | 4499711..4500262 | + | 552 | WP_000968317.1 | Polarity suppression protein | - |
| D8Z68_RS23335 () | 4500268..4500540 | + | 273 | WP_001185340.1 | ogr/Delta-like zinc finger family protein | - |
| D8Z68_RS23345 () | 4500950..4501516 | - | 567 | WP_000350115.1 | hypothetical protein | - |
| D8Z68_RS23350 () | 4501516..4502107 | - | 592 | Protein_4438 | hypothetical protein | - |
| D8Z68_RS23355 () | 4502138..4502770 | - | 633 | WP_000999326.1 | AAA family ATPase | - |
| D8Z68_RS23360 () | 4502763..4503221 | - | 459 | WP_000251694.1 | hypothetical protein | - |
| D8Z68_RS23365 () | 4503221..4503838 | - | 618 | WP_001303996.1 | hypothetical protein | - |
| D8Z68_RS23370 () | 4503811..4504227 | - | 417 | WP_000082144.1 | hypothetical protein | - |
| D8Z68_RS23375 () | 4504231..4504584 | - | 354 | Protein_4443 | site-specific integrase | - |
| D8Z68_RS23380 () | 4504640..4505853 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| D8Z68_RS23385 () | 4505898..4506725 | - | 828 | Protein_4445 | putative cyclic di-GMP phosphodiesterase PdeG ; Integrase | Integrase |
| D8Z68_RS23390 () | 4507212..4507646 | + | 435 | Protein_4446 | IS3 family transposase ISEc48 | Transposase |
| D8Z68_RS23395 () | 4507688..4508431 | - | 744 | WP_000246059.1 | AraC family transcriptional regulator | - |
| D8Z68_RS23400 () | 4509255..4510028 | + | 774 | WP_000355475.1 | hypothetical protein | - |
| D8Z68_RS23405 () | 4510086..4510640 | - | 555 | WP_000904979.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| D8Z68_RS23410 () | 4510670..4511080 | + | 411 | WP_001115553.1 | tail fiber protein | - |
| D8Z68_RS23415 () | 4511101..4511544 | + | 444 | WP_000344820.1 | tail assembly chaperone | - |
| D8Z68_RS23420 () | 4511516..4512109 | - | 594 | WP_000805544.1 | tail fiber assembly protein | - |
| D8Z68_RS23425 () | 4512109..4512903 | - | 795 | WP_001096963.1 | tail fiber protein | - |
| D8Z68_RS23430 () | 4512903..4513214 | - | 312 | WP_000788819.1 | hypothetical protein | - |
| D8Z68_RS23435 () | 4513211..4514133 | - | 923 | Protein_4455 | replication protein | - |
| D8Z68_RS23440 () | 4514166..4514459 | - | 294 | WP_000251067.1 | lambda phage CII family protein | - |
| D8Z68_RS23445 () | 4514578..4514778 | - | 201 | WP_000437875.1 | Cro/Cl family transcriptional regulator | - |
| D8Z68_RS23450 () | 4514879..4515592 | + | 714 | WP_001274756.1 | LexA family transcriptional regulator | - |
| D8Z68_RS23455 () | 4515720..4516576 | + | 857 | Protein_4459 | NYN domain-containing protein | - |
| D8Z68_RS23460 () | 4516698..4517911 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| D8Z68_RS23470 () | 4518238..4518483 | + | 246 | WP_001303805.1 | transcription antitermination protein | - |
| D8Z68_RS23475 () | 4518428..4519348 | + | 921 | Protein_4462 | Fatty acid metabolism regulator protein ; Integrase | Integrase |
| D8Z68_RS23485 () | 4519553..4520806 | - | 1254 | WP_000893282.1 | glutamate-5-semialdehyde dehydrogenase | - |
| D8Z68_RS23490 () | 4520818..4521921 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| D8Z68_RS23495 () | 4522209..4523264 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| D8Z68_RS23500 () | 4523303..4523704 | - | 402 | WP_000174701.1 | sigma factor-binding protein Crl | - |
| D8Z68_RS23505 () | 4523762..4525006 | - | 1245 | WP_000189536.1 | esterase FrsA | - |
| - () | 4524422..4524502 | - | 81 | NuclAT_11 | - | - |
| - () | 4524422..4524502 | - | 81 | NuclAT_11 | - | - |
| - () | 4524422..4524502 | - | 81 | NuclAT_11 | - | - |
| - () | 4524422..4524502 | - | 81 | NuclAT_11 | - | - |
| D8Z68_RS23510 () | 4525098..4525556 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| D8Z68_RS23515 () | 4525817..4527274 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| D8Z68_RS23520 () | 4527331..4527852 | - | 522 | Protein_4470 | peptide chain release factor H | - |
| D8Z68_RS23525 () | 4527851..4528054 | - | 204 | Protein_4471 | RNA ligase RtcB family protein | - |
| D8Z68_RS23530 () | 4528373..4528825 | - | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
| D8Z68_RS23535 () | 4528835..4529233 | - | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| D8Z68_RS23540 () | 4529236..4529529 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| D8Z68_RS23545 () | 4529581..4530636 | - | 1056 | WP_001226186.1 | DNA polymerase IV | - |
| D8Z68_RS23550 () | 4530707..4531492 | - | 786 | WP_000207556.1 | putative ABC transporter ATP-binding protein | VF |
| D8Z68_RS23555 () | 4531464..4533176 | + | 1713 | Protein_4477 | putative ABC transporter permease protein | VF |
| D8Z68_RS23560 () | 4533321..4533818 | - | 498 | Protein_4478 | REP-associated tyrosine transposase RayT | - |
| D8Z68_RS23565 () | 4533994..4534767 | - | 774 | WP_000543891.1 | Periplasmic trehalase | VF |
| D8Z68_RS23570 () | 4534953..4535213 | + | 261 | WP_000729705.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| D8Z68_RS23575 () | 4535232..4535492 | + | 261 | WP_001303998.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| D8Z68_RS23580 () | 4535648..4536388 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| D8Z68_RS23585 () | 4536359..4537126 | - | 768 | WP_001301698.1 | class II glutamine amidotransferase | - |
| D8Z68_RS23590 () | 4537231..4537809 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|