MGE detailed information
MGE type: Genomic_island MGE length: 21228 bp
Accession: NZ_CP032801 Location: 4820027..4841254 Organism: Escherichia coli strain ERL06-2442 Replicon: chromosome
Accession: NZ_CP032801 Location: 4820027..4841254 Organism: Escherichia coli strain ERL06-2442 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8Z71_RS24810 () | 4815753..4816295 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| D8Z71_RS24815 () | 4816588..4818738 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| D8Z71_RS24820 () | 4818788..4818991 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| D8Z71_RS24825 () | 4819002..4819958 | + | 957 | WP_001297640.1 | GTPase | - |
| D8Z71_RS24830 () | 4820027..4821385 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| D8Z71_RS24835 () | 4821394..4821678 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| D8Z71_RS24840 () | 4821956..4824388 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| D8Z71_RS24845 () | 4824455..4825924 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| D8Z71_RS24850 () | 4825924..4827678 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4827828..4827904 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4827828..4827904 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4827828..4827904 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4827828..4827904 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4827828..4827904 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4827828..4827904 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4827828..4827904 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4827828..4827904 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| D8Z71_RS24855 () | 4827899..4828240 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| D8Z71_RS24860 () | 4828287..4829450 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| D8Z71_RS24865 () | 4829498..4830379 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| D8Z71_RS24870 () | 4830476..4830640 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| D8Z71_RS24875 () | 4830817..4832229 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| D8Z71_RS28810 () | 4832472..4832672 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| D8Z71_RS24880 () | 4832677..4833429 | - | 753 | Protein_4731 | Recombination-promoting nuclease RpnD | VF |
| D8Z71_RS24885 () | 4833896..4835128 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| D8Z71_RS24890 () | 4835169..4836440 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| D8Z71_RS24895 () | 4836556..4837707 | + | 1152 | WP_001301805.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| D8Z71_RS24900 () | 4837717..4838484 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| D8Z71_RS24905 () | 4838481..4838747 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| D8Z71_RS24910 () | 4839059..4841254 | + | 2196 | WP_000535070.1 | hypothetical protein | VF |
| D8Z71_RS24920 () | 4841520..4842362 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| D8Z71_RS24925 () | 4842430..4843608 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |