MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92743 bp
Accession: NZ_CP032798 Location: 1..92743 Organism: Escherichia coli strain ERL06-2497 Replicon: plasmid pERL06-2497-1
Accession: NZ_CP032798 Location: 1..92743 Organism: Escherichia coli strain ERL06-2497 Replicon: plasmid pERL06-2497-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8Z72_RS28050 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| D8Z72_RS28065 () | 1783..2067 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| D8Z72_RS28070 () | 2067..2342 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D8Z72_RS28075 () | 2437..2643 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| D8Z72_RS28080 () | 2743..2958 | - | 216 | Protein_5 | transposase | - |
| D8Z72_RS28085 () | 3002..3568 | - | 567 | Protein_6 | IS3 family transposase ISSd1 | Transposase |
| D8Z72_RS28090 () | 3568..3984 | - | 417 | Protein_7 | IS91 family transposase | - |
| D8Z72_RS28095 () | 3984..4169 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| D8Z72_RS28100 () | 4346..6556 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| D8Z72_RS28105 () | 6600..6989 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| D8Z72_RS28110 () | 7046..8034 | + | 989 | Protein_11 | IS3 family transposase IS629 | Transposase |
| D8Z72_RS28120 () | 8215..12117 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| D8Z72_RS28125 () | 12373..12854 | - | 482 | Protein_13 | IS1 family transposase IS1N | Transposase |
| D8Z72_RS28135 () | 14296..15117 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| D8Z72_RS28140 () | 15117..16223 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| D8Z72_RS28145 () | 16313..18034 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| D8Z72_RS28150 () | 18108..19106 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| D8Z72_RS28155 () | 19159..19347 | + | 189 | Protein_18 | hypothetical protein | - |
| D8Z72_RS29260 () | 19451..19537 | - | 87 | Protein_19 | IS3 family transposase ISEhe3 | Transposase |
| D8Z72_RS28165 () | 19989..22685 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| D8Z72_RS28170 () | 22772..23647 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| D8Z72_RS28175 () | 23648..25615 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| D8Z72_RS28180 () | 25615..27120 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| D8Z72_RS28185 () | 27122..28345 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| D8Z72_RS28190 () | 28376..28810 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| D8Z72_RS28195 () | 28807..29361 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| D8Z72_RS28200 () | 29376..29723 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| D8Z72_RS28205 () | 29720..30319 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| D8Z72_RS28210 () | 30316..31293 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| D8Z72_RS28215 () | 31332..32504 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| D8Z72_RS28220 () | 32491..33003 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| D8Z72_RS28225 () | 33061..33894 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| D8Z72_RS28230 () | 33986..34387 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| D8Z72_RS28235 () | 34566..35737 | + | 1172 | Protein_34 | IS3 family transposase ISLad1 | Transposase |
| D8Z72_RS28245 () | 36278..36793 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| D8Z72_RS28250 () | 36795..39791 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| D8Z72_RS28255 () | 39841..41961 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| D8Z72_RS28260 () | 41965..43404 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| D8Z72_RS29265 () | 43525..44017 | + | 493 | Protein_39 | Transcriptional repressor MprA | VF |
| D8Z72_RS28280 () | 44148..44387 | + | 240 | WP_032195322.1 | hypothetical protein | - |
| D8Z72_RS28285 () | 44508..45248 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| D8Z72_RS28290 () | 45533..46510 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| D8Z72_RS28300 () | 46918..47118 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| D8Z72_RS28305 () | 47115..47735 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| D8Z72_RS28310 () | 47732..48415 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| D8Z72_RS28315 () | 48874..49092 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| D8Z72_RS28320 () | 49094..49399 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| D8Z72_RS28325 () | 49400..50206 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| D8Z72_RS28340 () | 52104..52442 | + | 339 | WP_071525396.1 | RepB family plasmid replication initiator protein | - |
| D8Z72_RS28345 () | 53030..54196 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| D8Z72_RS28350 () | 54196..55167 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| D8Z72_RS28375 () | 56467..58191 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| D8Z72_RS28380 () | 58268..59170 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| D8Z72_RS28385 () | 59174..59479 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| D8Z72_RS28395 () | 59556..60239 | + | 684 | WP_000085945.1 | DNA methylase | - |
| D8Z72_RS28400 () | 60240..60461 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| D8Z72_RS28405 () | 60355..60909 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| D8Z72_RS29270 () | 60955..61731 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| D8Z72_RS28420 () | 62272..62574 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| D8Z72_RS28425 () | 62621..63043 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| D8Z72_RS28430 () | 63040..63231 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| D8Z72_RS29275 () | 63201..63710 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| D8Z72_RS28445 () | 64227..64457 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| D8Z72_RS28450 () | 64509..65870 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| D8Z72_RS28455 () | 65917..66480 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| D8Z72_RS28460 () | 66566..67021 | - | 456 | WP_001358896.1 | hypothetical protein | - |
| D8Z72_RS28465 () | 67091..67297 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| D8Z72_RS28470 () | 67323..67775 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| D8Z72_RS28475 () | 67832..68065 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| D8Z72_RS28480 () | 68131..70089 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| D8Z72_RS28485 () | 70144..70578 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| D8Z72_RS28490 () | 70575..71336 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 71305..71503 | + | 199 | NuclAT_0 | - | - |
| - () | 71305..71503 | + | 199 | NuclAT_0 | - | - |
| - () | 71305..71503 | + | 199 | NuclAT_0 | - | - |
| - () | 71305..71503 | + | 199 | NuclAT_0 | - | - |
| D8Z72_RS28495 () | 71568..71726 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| D8Z72_RS28500 () | 71860..73881 | + | 2022 | Protein_75 | hypothetical protein | Relaxase |
| D8Z72_RS28505 () | 73949..74380 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| D8Z72_RS28520 () | 75059..75408 | - | 350 | Protein_77 | IS3 family transposase IS3H | Transposase |
| D8Z72_RS28525 () | 75502..75765 | + | 264 | Protein_78 | IS21 family transposase ISEc62 | Transposase |
| D8Z72_RS28530 () | 75805..75925 | + | 121 | Protein_79 | IS21 family transposase ISEc62 | Transposase |
| D8Z72_RS28535 () | 75922..76074 | + | 153 | Protein_80 | IS1 family transposase | - |
| D8Z72_RS28540 () | 76181..85690 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| D8Z72_RS28545 () | 85764..85988 | + | 225 | Protein_82 | IS3 family transposase IS3H | Transposase |
| D8Z72_RS28550 () | 86056..86226 | - | 171 | Protein_83 | IS3 family transposase IS1203 | Transposase |
| D8Z72_RS28555 () | 86233..86484 | - | 252 | Protein_84 | IS3 family transposase IS1203 | Transposase |
| D8Z72_RS28560 () | 86541..87929 | + | 1389 | Protein_85 | Multifunctional conjugation protein TraI | Relaxase |
| D8Z72_RS28565 () | 87949..88695 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| D8Z72_RS28570 () | 88754..89614 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| D8Z72_RS28575 () | 89717..90277 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| D8Z72_RS28580 () | 90410..90622 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| D8Z72_RS28585 () | 90867..91328 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| D8Z72_RS28590 () | 91374..91583 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| D8Z72_RS28595 () | 91621..91959 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| D8Z72_RS28600 () | 92199..92453 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|