MGE detailed information
MGE type: Prophage MGE length: 44087 bp
Accession: NZ_CP032797 Location: 4435754..4479840 Organism: Escherichia coli strain ERL06-2497 Replicon: chromosome
Accession: NZ_CP032797 Location: 4435754..4479840 Organism: Escherichia coli strain ERL06-2497 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8Z72_RS23075 () | 4432046..4433002 | + | 957 | WP_000121321.1 | molybdenum cofactor insertion chaperone PaoD | - |
| D8Z72_RS23080 () | 4433181..4434308 | - | 1128 | WP_000171064.1 | MFS transporter | - |
| D8Z72_RS23085 () | 4434450..4435508 | - | 1059 | WP_001303808.1 | alpha/beta hydrolase | - |
| D8Z72_RS23090 () | 4435754..4436656 | + | 903 | WP_010917758.1 | HTH-type transcriptional regulator PgrR | VF |
| D8Z72_RS23100 () | 4437359..4437637 | - | 279 | WP_001301751.1 | hypothetical protein | - |
| D8Z72_RS23105 () | 4437804..4438526 | - | 723 | WP_000361969.1 | putative oxidoreductase | VF |
| D8Z72_RS23110 () | 4438625..4439524 | + | 900 | WP_000687183.1 | HTH-type transcriptional regulator PgrR | VF |
| D8Z72_RS23115 () | 4440200..4441156 | + | 957 | WP_000205213.1 | hypothetical protein | - |
| D8Z72_RS23120 () | 4441289..4443622 | - | 2334 | WP_000016225.1 | toprim domain-containing protein | - |
| D8Z72_RS23125 () | 4443636..4443959 | - | 324 | WP_000562750.1 | DUF5375 family protein | - |
| D8Z72_RS23130 () | 4443959..4444180 | - | 222 | WP_001071227.1 | hypothetical protein | - |
| D8Z72_RS23135 () | 4444177..4444734 | - | 558 | WP_000973389.1 | host cell division inhibitor Icd-like protein | - |
| D8Z72_RS23140 () | 4444731..4444991 | - | 261 | WP_001244581.1 | AlpA family transcriptional regulator | - |
| D8Z72_RS23145 () | 4445925..4446677 | + | 753 | WP_000154958.1 | septation initiation protein | - |
| D8Z72_RS23150 () | 4446674..4447225 | + | 552 | WP_000968317.1 | Polarity suppression protein | - |
| D8Z72_RS23155 () | 4447231..4447503 | + | 273 | WP_001185340.1 | ogr/Delta-like zinc finger family protein | - |
| D8Z72_RS23165 () | 4447913..4448479 | - | 567 | WP_000350115.1 | hypothetical protein | - |
| D8Z72_RS23170 () | 4448479..4449069 | - | 591 | WP_000647284.1 | hypothetical protein | - |
| D8Z72_RS23175 () | 4449100..4449732 | - | 633 | WP_000999326.1 | AAA family ATPase | - |
| D8Z72_RS23180 () | 4449725..4450183 | - | 459 | WP_000251694.1 | hypothetical protein | - |
| D8Z72_RS23185 () | 4450183..4450800 | - | 618 | WP_001303996.1 | hypothetical protein | - |
| D8Z72_RS23190 () | 4450773..4451189 | - | 417 | WP_000082144.1 | hypothetical protein | - |
| D8Z72_RS23195 () | 4451193..4452374 | - | 1182 | WP_001130487.1 | Prophage integrase IntS ; Integrase | Integrase |
| D8Z72_RS23200 () | 4452861..4453295 | + | 435 | Protein_4411 | IS3 family transposase ISEc48 | Transposase |
| D8Z72_RS23205 () | 4453337..4454080 | - | 744 | WP_000246059.1 | AraC family transcriptional regulator | - |
| D8Z72_RS23210 () | 4454904..4455677 | + | 774 | WP_000355475.1 | hypothetical protein | - |
| D8Z72_RS23215 () | 4455735..4456289 | - | 555 | WP_000904979.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| D8Z72_RS23220 () | 4456319..4456729 | + | 411 | WP_001115553.1 | tail fiber protein | - |
| D8Z72_RS23225 () | 4456750..4457193 | + | 444 | WP_000344820.1 | tail assembly chaperone | - |
| D8Z72_RS23230 () | 4457165..4457758 | - | 594 | WP_000805544.1 | tail fiber assembly protein | - |
| D8Z72_RS23235 () | 4457758..4458552 | - | 795 | WP_001096963.1 | tail fiber protein | - |
| D8Z72_RS23240 () | 4458552..4458863 | - | 312 | WP_000788819.1 | hypothetical protein | - |
| D8Z72_RS23245 () | 4458860..4459782 | - | 923 | Protein_4420 | replication protein | - |
| D8Z72_RS23250 () | 4459815..4460108 | - | 294 | WP_000251069.1 | lambda phage CII family protein | - |
| D8Z72_RS23255 () | 4460227..4460427 | - | 201 | WP_000437875.1 | Cro/Cl family transcriptional regulator | - |
| D8Z72_RS23260 () | 4460528..4461241 | + | 714 | WP_001274756.1 | LexA family transcriptional regulator | - |
| D8Z72_RS23265 () | 4461369..4461758 | + | 390 | WP_000708838.1 | hypothetical protein | - |
| D8Z72_RS23270 () | 4461998..4462243 | + | 246 | WP_001303805.1 | transcription antitermination protein | - |
| D8Z72_RS23275 () | 4462188..4463108 | + | 921 | Protein_4426 | Tyrosine recombinase XerD ; Integrase | Integrase |
| D8Z72_RS23285 () | 4463313..4464566 | - | 1254 | WP_000893282.1 | glutamate-5-semialdehyde dehydrogenase | - |
| D8Z72_RS23290 () | 4464578..4465681 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| D8Z72_RS23295 () | 4465969..4466535 | + | 567 | Protein_4429 | Outer membrane pore protein E | VF |
| D8Z72_RS23305 () | 4467849..4468337 | + | 489 | Protein_4431 | porin | - |
| D8Z72_RS23310 () | 4468376..4468777 | - | 402 | WP_000174701.1 | sigma factor-binding protein Crl | - |
| D8Z72_RS23315 () | 4468835..4470079 | - | 1245 | WP_000189536.1 | esterase FrsA | - |
| - () | 4469495..4469575 | - | 81 | NuclAT_12 | - | - |
| - () | 4469495..4469575 | - | 81 | NuclAT_12 | - | - |
| - () | 4469495..4469575 | - | 81 | NuclAT_12 | - | - |
| - () | 4469495..4469575 | - | 81 | NuclAT_12 | - | - |
| D8Z72_RS23320 () | 4470171..4470629 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| D8Z72_RS23325 () | 4470890..4472347 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| D8Z72_RS23330 () | 4472404..4472925 | - | 522 | Protein_4436 | peptide chain release factor H | - |
| D8Z72_RS23335 () | 4472924..4473127 | - | 204 | Protein_4437 | RNA ligase RtcB family protein | - |
| D8Z72_RS23340 () | 4473446..4473898 | - | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
| D8Z72_RS23345 () | 4473908..4474306 | - | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| D8Z72_RS23350 () | 4474309..4474602 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| D8Z72_RS23355 () | 4474654..4475709 | - | 1056 | WP_001226188.1 | DNA polymerase IV | - |
| D8Z72_RS23360 () | 4475780..4476565 | - | 786 | WP_000207556.1 | Chemotaxis protein LafU | VF |
| D8Z72_RS23365 () | 4476537..4478249 | + | 1713 | Protein_4443 | Flagellar biosynthesis protein FlhA | VF |
| D8Z72_RS23370 () | 4478394..4478891 | - | 498 | Protein_4444 | REP-associated tyrosine transposase RayT | - |
| D8Z72_RS23375 () | 4479067..4479840 | - | 774 | WP_000543891.1 | Murein DD-endopeptidase MepH | VF |
| D8Z72_RS23380 () | 4480026..4480286 | + | 261 | WP_000729705.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| D8Z72_RS23385 () | 4480305..4480565 | + | 261 | WP_001303998.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| D8Z72_RS23390 () | 4480721..4481461 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| D8Z72_RS23395 () | 4481432..4482199 | - | 768 | WP_001301698.1 | class II glutamine amidotransferase | - |
| D8Z72_RS23400 () | 4482304..4482882 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|