MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93284 bp
Accession: NZ_CP032790 Location: 1..93284 Organism: Escherichia coli strain NZRM4169 Replicon: plasmid pNZRM4169
Accession: NZ_CP032790 Location: 1..93284 Organism: Escherichia coli strain NZRM4169 Replicon: plasmid pNZRM4169
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D8Z76_RS28050 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| D8Z76_RS28065 () | 1784..2068 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| D8Z76_RS28070 () | 2068..2343 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D8Z76_RS28075 () | 2438..2644 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| D8Z76_RS28080 () | 2744..2959 | - | 216 | Protein_5 | transposase | - |
| D8Z76_RS28085 () | 3003..3569 | - | 567 | Protein_6 | IS3 family transposase ISSd1 | Transposase |
| D8Z76_RS28090 () | 3569..3985 | - | 417 | Protein_7 | IS91 family transposase | - |
| D8Z76_RS28095 () | 3985..4170 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| D8Z76_RS28100 () | 4347..6557 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| D8Z76_RS28105 () | 6601..6990 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| D8Z76_RS28110 () | 7047..8035 | + | 989 | Protein_11 | IS3 family transposase IS629 | Transposase |
| D8Z76_RS28120 () | 8216..12118 | + | 3903 | WP_001034097.1 | hypothetical protein | VF |
| D8Z76_RS28125 () | 12374..12855 | - | 482 | Protein_13 | IS1 family transposase IS1N | Transposase |
| D8Z76_RS28135 () | 14296..15117 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| D8Z76_RS28140 () | 15117..16223 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| D8Z76_RS28145 () | 16313..18034 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| D8Z76_RS28150 () | 18108..19106 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| D8Z76_RS28155 () | 19159..19347 | + | 189 | Protein_18 | hypothetical protein | - |
| D8Z76_RS28825 () | 19451..19537 | - | 87 | Protein_19 | IS3 family transposase ISEhe3 | Transposase |
| D8Z76_RS28165 () | 19976..22672 | + | 2697 | WP_072141201.1 | hypothetical protein | VF |
| D8Z76_RS28170 () | 22759..23634 | + | 876 | WP_001302175.1 | hypothetical protein | VF |
| D8Z76_RS28175 () | 23635..25602 | + | 1968 | WP_001302177.1 | hypothetical protein | VF |
| D8Z76_RS28180 () | 25602..27107 | + | 1506 | WP_000092338.1 | hypothetical protein | VF |
| D8Z76_RS28185 () | 27109..28332 | + | 1224 | WP_001173152.1 | hypothetical protein | VF |
| D8Z76_RS28190 () | 28363..28797 | + | 435 | WP_001231211.1 | hypothetical protein | VF |
| D8Z76_RS28195 () | 28794..29348 | + | 555 | WP_000082929.1 | hypothetical protein | VF |
| D8Z76_RS28200 () | 29363..29710 | + | 348 | WP_000173396.1 | hypothetical protein | VF |
| D8Z76_RS28205 () | 29707..30306 | + | 600 | WP_000082782.1 | hypothetical protein | VF |
| D8Z76_RS28210 () | 30303..31280 | + | 978 | WP_000776550.1 | hypothetical protein | VF |
| D8Z76_RS28215 () | 31319..32491 | + | 1173 | WP_071525076.1 | hypothetical protein | VF |
| D8Z76_RS28220 () | 32478..32990 | + | 513 | WP_001004187.1 | hypothetical protein | VF |
| D8Z76_RS28225 () | 33048..33881 | + | 834 | WP_000096786.1 | hypothetical protein | VF |
| D8Z76_RS28230 () | 33973..34374 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| D8Z76_RS28235 () | 34553..35724 | + | 1172 | Protein_34 | IS3 family transposase ISLad1 | Transposase |
| D8Z76_RS28245 () | 36265..36780 | + | 516 | WP_000839950.1 | hypothetical protein | VF |
| D8Z76_RS28250 () | 36782..39778 | + | 2997 | WP_000217739.1 | hypothetical protein | VF |
| D8Z76_RS28255 () | 39828..41948 | + | 2121 | WP_000987091.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| D8Z76_RS28260 () | 41952..43391 | + | 1440 | WP_001213545.1 | hypothetical protein | VF |
| D8Z76_RS28830 () | 43512..44004 | + | 493 | Protein_39 | hypothetical protein | VF |
| D8Z76_RS28280 () | 44135..44365 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| D8Z76_RS28285 () | 44486..44776 | + | 291 | Protein_41 | tyrosine-type recombinase/integrase | - |
| D8Z76_RS28290 () | 44812..46350 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| D8Z76_RS28295 () | 46400..46747 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| D8Z76_RS28300 () | 46744..47124 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| D8Z76_RS28305 () | 47218..47676 | + | 459 | Protein_45 | IS91 family transposase ISMno23 | Transposase |
| D8Z76_RS28310 () | 47961..48938 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| D8Z76_RS28320 () | 49346..49546 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| D8Z76_RS28325 () | 49543..50163 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| D8Z76_RS28330 () | 50160..50843 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| D8Z76_RS28335 () | 51302..51520 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| D8Z76_RS28340 () | 51522..51827 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| D8Z76_RS28345 () | 51828..52634 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| D8Z76_RS28360 () | 54646..55401 | + | 756 | WP_000852148.1 | replication initiation protein RepE | - |
| D8Z76_RS28365 () | 55989..57155 | + | 1167 | WP_000772446.1 | hypothetical protein | VF |
| D8Z76_RS28370 () | 57155..58126 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| D8Z76_RS28385 () | 58821..59723 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| D8Z76_RS28390 () | 59727..60032 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| D8Z76_RS28395 () | 60109..60792 | + | 684 | WP_000085945.1 | DNA methylase | - |
| D8Z76_RS28400 () | 60793..61014 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| D8Z76_RS28405 () | 60908..61462 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| D8Z76_RS28835 () | 61508..62284 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| D8Z76_RS28420 () | 62825..63127 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| D8Z76_RS28425 () | 63174..63596 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| D8Z76_RS28430 () | 63593..63784 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| D8Z76_RS28840 () | 63754..64263 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| D8Z76_RS28445 () | 64780..65010 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| D8Z76_RS28450 () | 65062..66423 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| D8Z76_RS28455 () | 66470..67033 | + | 564 | WP_151539070.1 | class I SAM-dependent methyltransferase | - |
| D8Z76_RS28460 () | 67119..67562 | - | 444 | WP_001492078.1 | hypothetical protein | - |
| D8Z76_RS28465 () | 67632..67838 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| D8Z76_RS28470 () | 67864..68316 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| D8Z76_RS28475 () | 68373..68606 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| D8Z76_RS28480 () | 68672..70630 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| D8Z76_RS28485 () | 70685..71119 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| D8Z76_RS28490 () | 71116..71877 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 71846..72044 | + | 199 | NuclAT_0 | - | - |
| - () | 71846..72044 | + | 199 | NuclAT_0 | - | - |
| - () | 71846..72044 | + | 199 | NuclAT_0 | - | - |
| - () | 71846..72044 | + | 199 | NuclAT_0 | - | - |
| D8Z76_RS28495 () | 72109..72267 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| D8Z76_RS28500 () | 72401..74422 | + | 2022 | Protein_78 | hypothetical protein | Relaxase |
| D8Z76_RS28505 () | 74490..74921 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| D8Z76_RS28520 () | 75600..75949 | - | 350 | Protein_80 | IS3 family transposase IS3H | Transposase |
| D8Z76_RS28525 () | 76043..76306 | + | 264 | Protein_81 | IS21 family transposase ISEc62 | Transposase |
| D8Z76_RS28530 () | 76346..76466 | + | 121 | Protein_82 | IS21 family transposase ISEc62 | Transposase |
| D8Z76_RS28535 () | 76463..76615 | + | 153 | Protein_83 | IS1 family transposase | - |
| D8Z76_RS28540 () | 76722..86231 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| D8Z76_RS28545 () | 86305..86529 | + | 225 | Protein_85 | IS3 family transposase IS3H | Transposase |
| D8Z76_RS28550 () | 86597..86767 | - | 171 | Protein_86 | IS3 family transposase IS1203 | Transposase |
| D8Z76_RS28555 () | 86774..87025 | - | 252 | Protein_87 | IS3 family transposase IS1203 | Transposase |
| D8Z76_RS28560 () | 87082..88470 | + | 1389 | Protein_88 | hypothetical protein | Relaxase |
| D8Z76_RS28565 () | 88490..89236 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| D8Z76_RS28570 () | 89295..90155 | + | 861 | WP_000704522.1 | hypothetical protein | VF |
| D8Z76_RS28575 () | 90258..90818 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| D8Z76_RS28580 () | 90951..91163 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| D8Z76_RS28585 () | 91408..91869 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| D8Z76_RS28590 () | 91915..92124 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| D8Z76_RS28595 () | 92162..92500 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| D8Z76_RS28600 () | 92740..92994 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|