MGE detailed information
MGE type: Prophage MGE length: 43854 bp
Accession: NZ_CP032618 Location: 1504359..1548212 Organism: Pseudomonas fluorescens strain PF08 Replicon: chromosome
Accession: NZ_CP032618 Location: 1504359..1548212 Organism: Pseudomonas fluorescens strain PF08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D7M10_RS06875 () | 1499902..1500377 | + | 476 | Protein_1327 | hypothetical protein | - |
| D7M10_RS06880 () | 1500382..1500870 | - | 489 | WP_057958768.1 | DMT family transporter | - |
| D7M10_RS06885 () | 1500939..1501865 | + | 927 | WP_120732020.1 | LysR family transcriptional regulator | - |
| D7M10_RS06890 () | 1501929..1502570 | + | 642 | WP_057439757.1 | LysE family translocator | - |
| D7M10_RS06895 () | 1502689..1503216 | + | 528 | WP_057439756.1 | DUF4142 domain-containing protein | - |
| D7M10_RS28095 () | 1503602..1503748 | + | 147 | WP_162947704.1 | hypothetical protein | - |
| D7M10_RS06900 () | 1503762..1504262 | - | 501 | WP_115127578.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| D7M10_RS06905 () | 1504359..1504769 | - | 411 | WP_120732022.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| D7M10_RS06910 () | 1504792..1504974 | - | 183 | WP_115127579.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| D7M10_RS06915 () | 1505355..1505585 | - | 231 | WP_044272746.1 | hypothetical protein | - |
| D7M10_RS28100 () | 1505660..1505836 | + | 177 | WP_162947705.1 | hypothetical protein | - |
| D7M10_RS28105 () | 1505869..1506045 | - | 177 | WP_162947706.1 | hypothetical protein | - |
| D7M10_RS06920 () | 1506042..1506296 | - | 255 | WP_120732024.1 | hypothetical protein | - |
| D7M10_RS06925 () | 1506293..1506940 | - | 648 | WP_120732026.1 | hypothetical protein | - |
| D7M10_RS06930 () | 1506940..1507245 | - | 306 | WP_120732027.1 | hypothetical protein | - |
| D7M10_RS06940 () | 1507819..1508430 | - | 612 | WP_120732029.1 | 3'-5' exonuclease | - |
| D7M10_RS28110 () | 1508534..1509226 | + | 693 | WP_162947707.1 | hypothetical protein | - |
| D7M10_RS06950 () | 1509321..1510388 | - | 1068 | WP_120732033.1 | DNA translocase FtsK | - |
| D7M10_RS06955 () | 1510398..1510598 | - | 201 | WP_120732035.1 | hypothetical protein | - |
| D7M10_RS06960 () | 1510601..1512244 | - | 1644 | WP_120732037.1 | YqaJ viral recombinase family protein | - |
| D7M10_RS06965 () | 1512231..1512992 | - | 762 | WP_120732039.1 | hypothetical protein | - |
| D7M10_RS28400 () | 1513046..1513501 | - | 456 | WP_205576967.1 | hypothetical protein | - |
| D7M10_RS06975 () | 1513626..1513919 | - | 294 | WP_120732041.1 | hypothetical protein | - |
| D7M10_RS06980 () | 1514047..1514277 | - | 231 | WP_120732043.1 | hypothetical protein | - |
| D7M10_RS06985 () | 1514274..1514546 | - | 273 | WP_120732045.1 | hypothetical protein | - |
| D7M10_RS06990 () | 1514536..1514889 | - | 354 | WP_162947708.1 | hypothetical protein | - |
| D7M10_RS06995 () | 1515207..1515572 | - | 366 | WP_157717972.1 | hypothetical protein | - |
| D7M10_RS07000 () | 1515601..1516317 | - | 717 | WP_096001740.1 | helix-turn-helix transcriptional regulator | - |
| D7M10_RS07005 () | 1516407..1516595 | + | 189 | WP_060772916.1 | helix-turn-helix domain-containing protein | - |
| D7M10_RS07010 () | 1516598..1516912 | + | 315 | WP_060772915.1 | transcriptional regulator | - |
| D7M10_RS07015 () | 1516915..1517850 | + | 936 | WP_120732048.1 | DUF1376 domain-containing protein | - |
| D7M10_RS28115 () | 1517777..1518496 | + | 720 | WP_162947709.1 | hypothetical protein | - |
| D7M10_RS07025 () | 1518489..1518824 | + | 336 | WP_120732050.1 | hypothetical protein | - |
| D7M10_RS07030 () | 1518821..1519255 | + | 435 | WP_120732051.1 | RusA family crossover junction endodeoxyribonuclease | - |
| D7M10_RS07035 () | 1519296..1519925 | + | 630 | WP_120732053.1 | hypothetical protein | - |
| D7M10_RS07040 () | 1519997..1520935 | + | 939 | WP_120732055.1 | hypothetical protein | - |
| D7M10_RS07045 () | 1521194..1521478 | + | 285 | WP_120732057.1 | Holin | - |
| D7M10_RS07050 () | 1521475..1521993 | + | 519 | WP_120732059.1 | lysozyme | - |
| D7M10_RS07055 () | 1521990..1522457 | + | 468 | WP_120732061.1 | lysis system i-spanin subunit Rz | - |
| D7M10_RS07060 () | 1522462..1522998 | + | 537 | WP_120732063.1 | terminase small subunit | - |
| D7M10_RS07065 () | 1522976..1524487 | + | 1512 | WP_120732065.1 | terminase | - |
| D7M10_RS07070 () | 1524489..1524839 | + | 351 | WP_120732067.1 | hypothetical protein | - |
| D7M10_RS07075 () | 1524841..1526535 | + | 1695 | WP_162947710.1 | hypothetical protein | - |
| D7M10_RS07080 () | 1526535..1526837 | + | 303 | WP_120732071.1 | hypothetical protein | - |
| D7M10_RS07085 () | 1526834..1527559 | + | 726 | WP_120732073.1 | hypothetical protein | - |
| D7M10_RS07090 () | 1527589..1528584 | + | 996 | WP_120732075.1 | phage capsid protein | - |
| D7M10_RS07095 () | 1528622..1529014 | + | 393 | WP_120732077.1 | hypothetical protein | - |
| D7M10_RS07100 () | 1529007..1529378 | + | 372 | WP_120732079.1 | hypothetical protein | - |
| D7M10_RS07105 () | 1529438..1530037 | + | 600 | WP_120732081.1 | hypothetical protein | - |
| D7M10_RS07110 () | 1530034..1532376 | + | 2343 | WP_120732083.1 | hypothetical protein | - |
| D7M10_RS07115 () | 1532366..1532830 | + | 465 | WP_162947711.1 | hypothetical protein | - |
| D7M10_RS07120 () | 1532833..1533384 | + | 552 | WP_120732086.1 | hypothetical protein | - |
| D7M10_RS07125 () | 1533395..1535497 | + | 2103 | WP_120732088.1 | transglycosylase SLT domain-containing protein | - |
| D7M10_RS07130 () | 1535494..1541613 | + | 6120 | WP_120732090.1 | hypothetical protein | - |
| D7M10_RS07135 () | 1541686..1543473 | + | 1788 | WP_120732092.1 | hypothetical protein | - |
| D7M10_RS07140 () | 1543495..1545465 | - | 1971 | WP_120732093.1 | O-acetyltransferase OatA | VF |
| D7M10_RS28120 () | 1545512..1546795 | - | 1284 | WP_162947712.1 | hypothetical protein | - |
| D7M10_RS07145 () | 1546911..1548170 | - | 1260 | WP_120732095.1 | Prophage integrase IntS ; Integrase | Integrase |
| D7M10_RS07155 () | 1548567..1549451 | - | 885 | WP_120732097.1 | alpha/beta hydrolase | - |
| D7M10_RS07160 () | 1549747..1550439 | - | 693 | WP_120732098.1 | pseudouridine synthase | - |
| D7M10_RS07165 () | 1550439..1550651 | - | 213 | WP_057439751.1 | cysteine-rich CWC family protein | - |
| D7M10_RS07175 () | 1551374..1551802 | + | 429 | WP_120732100.1 | DUF3757 domain-containing protein | - |
| D7M10_RS07180 () | 1551825..1552937 | - | 1113 | WP_057439749.1 | enoyl-CoA hydratase/isomerase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|