MGE detailed information
MGE type: Genomic_island MGE length: 13388 bp
Accession: NZ_CP032523 Location: 2448611..2461998 Organism: Shigella sonnei strain AR_0030 Replicon: chromosome
Accession: NZ_CP032523 Location: 2448611..2461998 Organism: Shigella sonnei strain AR_0030 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM357_RS12420 (2443672) | 2443672..2447889 | + | 4218 | WP_000508700.1 | RHS element core protein | - |
| AM357_RS12425 (2447901) | 2447901..2448349 | + | 449 | Protein_2392 | RHS element protein dsORF-h1 | - |
| AM357_RS12430 (2448611) | 2448611..2449747 | + | 1137 | Protein_2393 | ISAs1 family transposase ISEc1 | Transposase |
| AM357_RS12435 (2449785) | 2449785..2450195 | + | 411 | WP_162772774.1 | hypothetical protein | - |
| AM357_RS12440 (2450195) | 2450195..2450572 | + | 378 | WP_001077737.1 | hypothetical protein | - |
| AM357_RS12445 (2451041) | 2451041..2452177 | + | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| AM357_RS12450 (2452219) | 2452219..2452989 | - | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| AM357_RS12455 (2453170) | 2453170..2453616 | + | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| AM357_RS12460 (2453659) | 2453659..2456103 | - | 2445 | WP_000973074.1 | Acyl-coenzyme A dehydrogenase | VF |
| AM357_RS12465 (2456343) | 2456343..2456921 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| AM357_RS12470 (2457127) | 2457127..2457894 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| AM357_RS12475 (2457865) | 2457865..2458605 | - | 741 | WP_119170906.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| AM357_RS12480 (2458761) | 2458761..2459039 | - | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| AM357_RS12485 (2459042) | 2459042..2459302 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| AM357_RS12490 (2459488) | 2459488..2460261 | + | 774 | WP_127148796.1 | Murein DD-endopeptidase MepH | VF |
| AM357_RS12500 (2461302) | 2461302..2461430 | + | 129 | Protein_2407 | ISAs1 family transposase | - |
| AM357_RS12505 (2461501) | 2461501..2461998 | + | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| AM357_RS12510 (2462121) | 2462121..2463833 | - | 1713 | Protein_2409 | flagellar biosynthesis protein FlhA | - |
| AM357_RS12515 (2463805) | 2463805..2464590 | + | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| AM357_RS12520 (2464661) | 2464661..2465716 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| AM357_RS12525 (2465713) | 2465713..2466165 | + | 453 | WP_119170929.1 | GNAT family N-acetyltransferase | - |
| AM357_RS12530 (2466411) | 2466411..2466932 | + | 522 | Protein_2413 | RNA ligase RtcB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|