MGE detailed information
MGE type: Prophage MGE length: 40332 bp
Accession: NZ_CP032459 Location: 4424707..4465038 Organism: Pseudomonas syringae strain CAS02 Replicon: chromosome
Accession: NZ_CP032459 Location: 4424707..4465038 Organism: Pseudomonas syringae strain CAS02 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5S12_RS18960 () | 4420473..4421141 | + | 669 | WP_044309787.1 | ABC transporter ATP-binding protein | - |
| D5S12_RS18965 () | 4421141..4423621 | + | 2481 | WP_099266570.1 | ABC transporter permease | - |
| D5S12_RS18970 () | 4423611..4424690 | + | 1080 | WP_187599271.1 | iron ABC transporter permease | - |
| D5S12_RS18975 () | 4424707..4425111 | - | 405 | WP_060708102.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| D5S12_RS18980 () | 4425147..4425329 | - | 183 | WP_003434313.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| D5S12_RS18985 () | 4425833..4426177 | + | 345 | WP_054071062.1 | hypothetical protein | - |
| D5S12_RS18990 () | 4426192..4427436 | - | 1245 | WP_188056801.1 | SGNH/GDSL hydrolase family protein | - |
| D5S12_RS18995 () | 4427433..4427612 | - | 180 | WP_044309005.1 | hypothetical protein | - |
| D5S12_RS19000 () | 4427705..4428250 | - | 546 | WP_188056802.1 | glycoside hydrolase family 19 protein | - |
| D5S12_RS19005 () | 4428311..4428589 | - | 279 | WP_188056803.1 | tail fiber assembly protein | - |
| D5S12_RS19010 () | 4428582..4428938 | - | 357 | WP_188056804.1 | hypothetical protein | - |
| D5S12_RS19015 () | 4428938..4429936 | - | 999 | WP_188056805.1 | phage tail protein | - |
| D5S12_RS19020 () | 4429967..4430629 | - | 663 | WP_188056806.1 | hypothetical protein | - |
| D5S12_RS19025 () | 4430626..4430994 | - | 369 | WP_188056807.1 | hypothetical protein | - |
| D5S12_RS19030 () | 4431023..4434169 | - | 3147 | WP_188056808.1 | DUF1983 domain-containing protein | - |
| D5S12_RS19035 () | 4434169..4434567 | - | 399 | WP_188056809.1 | hypothetical protein | - |
| D5S12_RS19040 () | 4434570..4435172 | - | 603 | WP_188056810.1 | hypothetical protein | - |
| D5S12_RS19045 () | 4435172..4435756 | - | 585 | WP_188056811.1 | hypothetical protein | - |
| D5S12_RS19050 () | 4435778..4439182 | - | 3405 | WP_188056812.1 | phage tail tape measure protein | - |
| D5S12_RS19055 () | 4439204..4439413 | - | 210 | WP_004408598.1 | hypothetical protein | - |
| D5S12_RS19060 () | 4439446..4439781 | - | 336 | WP_005745637.1 | hypothetical protein | - |
| D5S12_RS19065 () | 4439793..4440290 | - | 498 | WP_188056813.1 | hypothetical protein | - |
| D5S12_RS19070 () | 4440345..4440731 | - | 387 | WP_188056814.1 | DUF3168 domain-containing protein | - |
| D5S12_RS19075 () | 4440724..4441224 | - | 501 | WP_188056815.1 | HK97 gp10 family phage protein | - |
| D5S12_RS19080 () | 4441228..4441392 | - | 165 | WP_005745634.1 | hypothetical protein | - |
| D5S12_RS19085 () | 4441402..4441722 | - | 321 | WP_188056816.1 | head-tail adaptor protein | - |
| D5S12_RS19090 () | 4441722..4442021 | - | 300 | WP_024664857.1 | head-tail connector protein | - |
| D5S12_RS19095 () | 4442021..4442344 | - | 324 | WP_137982950.1 | hypothetical protein | - |
| D5S12_RS19100 () | 4442396..4443613 | - | 1218 | WP_188056817.1 | phage major capsid protein | - |
| D5S12_RS19105 () | 4443610..4444254 | - | 645 | WP_188056818.1 | HK97 family phage prohead protease | - |
| D5S12_RS19110 () | 4444238..4445455 | - | 1218 | WP_122280958.1 | phage portal protein | - |
| D5S12_RS19115 () | 4445458..4447143 | - | 1686 | WP_188056819.1 | terminase large subunit | - |
| D5S12_RS19120 () | 4447143..4447649 | - | 507 | WP_057434459.1 | terminase | - |
| D5S12_RS19125 () | 4447791..4448129 | - | 339 | WP_032703197.1 | HNH endonuclease | - |
| D5S12_RS19130 () | 4448133..4448279 | - | 147 | WP_005745617.1 | hypothetical protein | - |
| D5S12_RS19135 () | 4448251..4448670 | - | 420 | WP_188056820.1 | hypothetical protein | - |
| D5S12_RS19140 () | 4448667..4448990 | - | 324 | WP_122559722.1 | phage holin, lambda family | - |
| D5S12_RS19145 () | 4449313..4449696 | - | 384 | WP_188056821.1 | antitermination protein Q | - |
| D5S12_RS19150 () | 4449699..4450019 | - | 321 | WP_188056822.1 | hypothetical protein | - |
| D5S12_RS19155 () | 4450016..4450201 | - | 186 | WP_188056823.1 | hypothetical protein | - |
| D5S12_RS19160 () | 4450218..4451498 | - | 1281 | WP_188056824.1 | Prophage integrase IntA ; Integrase | Integrase |
| D5S12_RS19165 () | 4451495..4451926 | - | 432 | WP_188056825.1 | VRR-NUC domain-containing protein | - |
| D5S12_RS19170 () | 4451923..4452219 | - | 297 | WP_188056826.1 | DUF1364 domain-containing protein | - |
| D5S12_RS19175 () | 4452216..4452410 | - | 195 | WP_188056827.1 | hypothetical protein | - |
| D5S12_RS19180 () | 4452412..4453206 | - | 795 | WP_188056828.1 | IS21 family transposase ISMtsp8 | Transposase |
| D5S12_RS19185 () | 4453196..4453993 | - | 798 | WP_188056829.1 | phage replication protein | - |
| D5S12_RS19190 () | 4454266..4454475 | - | 210 | WP_188056830.1 | helix-turn-helix domain-containing protein | - |
| D5S12_RS19195 () | 4454506..4455207 | + | 702 | WP_188056831.1 | helix-turn-helix domain-containing protein | - |
| D5S12_RS19200 () | 4455521..4455856 | + | 336 | WP_188056832.1 | hypothetical protein | - |
| D5S12_RS19205 () | 4456158..4456655 | + | 498 | WP_188056833.1 | hypothetical protein | - |
| D5S12_RS19210 () | 4457251..4457652 | + | 402 | WP_024639033.1 | helix-turn-helix transcriptional regulator | - |
| D5S12_RS19215 () | 4457717..4457923 | + | 207 | WP_031596472.1 | hypothetical protein | - |
| D5S12_RS19220 () | 4458243..4458581 | + | 339 | WP_188056834.1 | hypothetical protein | - |
| D5S12_RS19225 () | 4458581..4459171 | + | 591 | WP_188056835.1 | hypothetical protein | - |
| D5S12_RS19230 () | 4459168..4459425 | + | 258 | WP_188056836.1 | hypothetical protein | - |
| D5S12_RS19235 () | 4459445..4459861 | - | 417 | WP_188056837.1 | hypothetical protein | - |
| D5S12_RS19240 () | 4459967..4460734 | + | 768 | WP_188056838.1 | hypothetical protein | - |
| D5S12_RS19245 () | 4460828..4461316 | + | 489 | WP_188056839.1 | HNH endonuclease | - |
| D5S12_RS19250 () | 4461487..4462050 | + | 564 | WP_188056979.1 | hypothetical protein | - |
| D5S12_RS19255 () | 4462110..4462898 | + | 789 | WP_188056840.1 | hypothetical protein | - |
| D5S12_RS19260 () | 4462895..4463083 | + | 189 | WP_188056841.1 | hypothetical protein | - |
| D5S12_RS19265 () | 4463133..4463630 | + | 498 | WP_188056842.1 | hypothetical protein | - |
| D5S12_RS19270 () | 4463854..4465038 | + | 1185 | WP_188056843.1 | Putative defective protein IntQ ; Integrase | Integrase |
| D5S12_RS19275 () | 4465075..4466847 | + | 1773 | WP_187599269.1 | N-acetylglutaminylglutamine amidotransferase | - |
| D5S12_RS19280 () | 4466851..4468599 | + | 1749 | WP_096128184.1 | N-acetylglutaminylglutamine synthetase | - |
| D5S12_RS19285 () | 4468679..4469875 | + | 1197 | WP_003412697.1 | osmoprotectant NAGGN system M42 family peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|