MGE detailed information
MGE type: Prophage MGE length: 47417 bp
Accession: NZ_CP032456 Location: 4533048..4580464 Organism: Pseudomonas savastanoi strain CAS03 Replicon: chromosome
Accession: NZ_CP032456 Location: 4533048..4580464 Organism: Pseudomonas savastanoi strain CAS03 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D5S10_RS20045 () | 4528177..4528764 | + | 588 | WP_002552569.1 | YecA family protein | - |
| D5S10_RS20050 () | 4528775..4529179 | + | 405 | WP_016980790.1 | YbaN family protein | - |
| D5S10_RS20055 () | 4529232..4530728 | - | 1497 | WP_005779594.1 | polyphosphate:AMP phosphotransferase | - |
| D5S10_RS20060 () | 4530891..4532873 | + | 1983 | WP_016980789.1 | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
| D5S10_RS20065 () | 4533048..4533716 | + | 669 | WP_016980788.1 | ABC transporter ATP-binding protein | - |
| D5S10_RS20070 () | 4533716..4536196 | + | 2481 | WP_016980787.1 | ABC transporter permease | - |
| D5S10_RS20075 () | 4536186..4537265 | + | 1080 | WP_016980785.1 | iron ABC transporter permease | - |
| D5S10_RS20080 () | 4537282..4537686 | - | 405 | WP_024661723.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| D5S10_RS20085 () | 4537722..4537904 | - | 183 | WP_003434313.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| D5S10_RS20090 () | 4538512..4539150 | + | 639 | WP_044294026.1 | hypothetical protein | - |
| D5S10_RS20095 () | 4539172..4540416 | - | 1245 | WP_192485458.1 | SGNH/GDSL hydrolase family protein | - |
| D5S10_RS20100 () | 4540413..4540592 | - | 180 | WP_044294451.1 | hypothetical protein | - |
| D5S10_RS20105 () | 4540649..4541179 | - | 531 | WP_044294401.1 | DUF2514 domain-containing protein | - |
| D5S10_RS20110 () | 4541176..4541709 | - | 534 | WP_044294399.1 | glycoside hydrolase family 19 protein | - |
| D5S10_RS20115 () | 4541774..4543093 | - | 1320 | WP_044294397.1 | tail fiber domain-containing protein | - |
| D5S10_RS20120 () | 4543123..4543785 | - | 663 | WP_044294395.1 | hypothetical protein | - |
| D5S10_RS20125 () | 4543782..4544150 | - | 369 | WP_044294393.1 | hypothetical protein | - |
| D5S10_RS20130 () | 4544147..4547272 | - | 3126 | WP_044294391.1 | DUF1983 domain-containing protein | - |
| D5S10_RS20135 () | 4547272..4547670 | - | 399 | WP_044294384.1 | hypothetical protein | - |
| D5S10_RS20140 () | 4547673..4548275 | - | 603 | WP_003418869.1 | hypothetical protein | - |
| D5S10_RS20145 () | 4548275..4548859 | - | 585 | WP_054994525.1 | hypothetical protein | - |
| D5S10_RS20150 () | 4548881..4552285 | - | 3405 | WP_192485459.1 | phage tail tape measure protein | - |
| D5S10_RS20155 () | 4552307..4552516 | - | 210 | WP_004408598.1 | hypothetical protein | - |
| D5S10_RS20160 () | 4552549..4552884 | - | 336 | WP_005745637.1 | hypothetical protein | - |
| D5S10_RS20165 () | 4552896..4553393 | - | 498 | WP_188056813.1 | hypothetical protein | - |
| D5S10_RS20170 () | 4553448..4553834 | - | 387 | WP_192485460.1 | DUF3168 domain-containing protein | - |
| D5S10_RS20175 () | 4553827..4554327 | - | 501 | WP_188056815.1 | HK97 gp10 family phage protein | - |
| D5S10_RS20180 () | 4554331..4554495 | - | 165 | WP_005745634.1 | hypothetical protein | - |
| D5S10_RS20185 () | 4554505..4554825 | - | 321 | WP_188056816.1 | head-tail adaptor protein | - |
| D5S10_RS20190 () | 4554825..4555124 | - | 300 | WP_024664857.1 | head-tail connector protein | - |
| D5S10_RS20195 () | 4555124..4555477 | - | 354 | WP_046235170.1 | hypothetical protein | - |
| D5S10_RS20200 () | 4555529..4556746 | - | 1218 | WP_188056817.1 | phage major capsid protein | - |
| D5S10_RS20205 () | 4556743..4557387 | - | 645 | WP_188056818.1 | HK97 family phage prohead protease | - |
| D5S10_RS20210 () | 4557371..4558588 | - | 1218 | WP_122280958.1 | phage portal protein | - |
| D5S10_RS20215 () | 4558591..4560276 | - | 1686 | WP_192485461.1 | terminase large subunit | - |
| D5S10_RS20220 () | 4560276..4560782 | - | 507 | WP_057434459.1 | terminase | - |
| D5S10_RS20225 () | 4560922..4561260 | - | 339 | WP_192485462.1 | HNH endonuclease | - |
| D5S10_RS20230 () | 4561264..4561410 | - | 147 | WP_005745617.1 | hypothetical protein | - |
| D5S10_RS20235 () | 4561382..4561801 | - | 420 | WP_192485463.1 | hypothetical protein | - |
| D5S10_RS20240 () | 4561798..4562112 | - | 315 | WP_192485739.1 | phage holin, lambda family | - |
| D5S10_RS20245 () | 4562157..4562666 | - | 510 | WP_192485464.1 | hypothetical protein | - |
| D5S10_RS20250 () | 4562753..4563091 | - | 339 | WP_147462624.1 | hypothetical protein | - |
| D5S10_RS20255 () | 4563324..4563710 | - | 387 | WP_016980598.1 | antitermination protein Q | - |
| D5S10_RS20260 () | 4563713..4564033 | - | 321 | WP_016980599.1 | hypothetical protein | - |
| D5S10_RS20265 () | 4564030..4564233 | - | 204 | WP_016980600.1 | hypothetical protein | - |
| D5S10_RS20270 () | 4564250..4565530 | - | 1281 | WP_192485465.1 | site-specific integrase | - |
| D5S10_RS20275 () | 4565527..4565958 | - | 432 | WP_010211490.1 | VRR-NUC domain-containing protein | - |
| D5S10_RS20280 () | 4565955..4566251 | - | 297 | WP_192485466.1 | DUF1364 domain-containing protein | - |
| D5S10_RS20285 () | 4566248..4566442 | - | 195 | WP_055005117.1 | hypothetical protein | - |
| D5S10_RS20290 () | 4566444..4567238 | - | 795 | WP_192485467.1 | ATP-binding protein | - |
| D5S10_RS20295 () | 4567228..4568025 | - | 798 | WP_192485468.1 | phage replication protein | - |
| D5S10_RS20300 () | 4568261..4568473 | - | 213 | WP_004408653.1 | hypothetical protein | - |
| D5S10_RS20305 () | 4568579..4569451 | + | 873 | WP_192485469.1 | propanediol utilization protein | - |
| D5S10_RS20310 () | 4569616..4570140 | + | 525 | WP_192485470.1 | hypothetical protein | - |
| D5S10_RS20315 () | 4570189..4570491 | - | 303 | WP_192485471.1 | DUF1654 domain-containing protein | - |
| D5S10_RS20320 () | 4571093..4571494 | + | 402 | WP_024639033.1 | helix-turn-helix transcriptional regulator | - |
| D5S10_RS20325 () | 4571558..4571821 | + | 264 | WP_192485472.1 | hypothetical protein | - |
| D5S10_RS20330 () | 4572356..4572694 | + | 339 | WP_192485473.1 | hypothetical protein | - |
| D5S10_RS20335 () | 4572694..4573281 | + | 588 | WP_122302477.1 | hypothetical protein | - |
| D5S10_RS20340 () | 4573370..4573717 | + | 348 | WP_002553171.1 | hypothetical protein | - |
| D5S10_RS20345 () | 4573747..4574562 | + | 816 | WP_044295078.1 | DUF2303 family protein | - |
| D5S10_RS20350 () | 4574606..4574935 | - | 330 | WP_044295079.1 | hypothetical protein | - |
| D5S10_RS20355 () | 4575059..4575628 | - | 570 | WP_152644594.1 | hypothetical protein | - |
| D5S10_RS20360 () | 4575724..4576506 | + | 783 | WP_044295081.1 | DUF2786 domain-containing protein | - |
| D5S10_RS20365 () | 4576540..4577202 | + | 663 | WP_192485474.1 | hypothetical protein | - |
| D5S10_RS20370 () | 4577199..4577357 | + | 159 | WP_160296097.1 | hypothetical protein | - |
| D5S10_RS20375 () | 4577567..4578223 | + | 657 | WP_044295083.1 | hypothetical protein | - |
| D5S10_RS20380 () | 4578226..4578438 | - | 213 | WP_044295084.1 | hypothetical protein | - |
| D5S10_RS20385 () | 4578562..4579056 | + | 495 | WP_192485475.1 | hypothetical protein | - |
| D5S10_RS20390 () | 4579280..4580464 | + | 1185 | WP_192485476.1 | site-specific integrase | - |
| D5S10_RS20395 () | 4580501..4582273 | + | 1773 | WP_016980783.1 | N-acetylglutaminylglutamine amidotransferase | - |
| D5S10_RS20400 () | 4582277..4584025 | + | 1749 | WP_016980782.1 | N-acetylglutaminylglutamine synthetase | - |
| D5S10_RS20405 () | 4584107..4585303 | + | 1197 | WP_002552559.1 | osmoprotectant NAGGN system M42 family peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|