MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 96567 bp
Accession: NZ_CP032380 Location: 1..96567 Organism: Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 Replicon: plasmid pSDU1-USMARC-69807
Accession: NZ_CP032380 Location: 1..96567 Organism: Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 Replicon: plasmid pSDU1-USMARC-69807
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DZA54_RS24750 () | 121..723 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| DZA54_RS24755 () | 993..1274 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| DZA54_RS24765 () | 1573..2109 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| DZA54_RS24770 () | 2112..3122 | + | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| DZA54_RS24775 () | 3127..3996 | + | 870 | WP_012728230.1 | 3'-5' exonuclease | - |
| DZA54_RS24780 () | 3993..4484 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| DZA54_RS26055 () | 4530..4661 | - | 132 | WP_014342220.1 | hypothetical protein | - |
| DZA54_RS24785 () | 4811..5686 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| DZA54_RS24790 () | 5831..6871 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| DZA54_RS24800 () | 7158..8669 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| DZA54_RS24805 () | 8780..9820 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| DZA54_RS24810 () | 9822..11255 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| DZA54_RS24815 () | 11268..14882 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| DZA54_RS24820 () | 14920..15282 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| DZA54_RS24825 () | 15998..16270 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| DZA54_RS24830 () | 16270..16803 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| DZA54_RS24835 () | 16814..17422 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| DZA54_RS24840 () | 17419..17970 | + | 552 | WP_001020646.1 | hypothetical protein | - |
| DZA54_RS24845 () | 18030..18449 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| DZA54_RS24850 () | 18451..18744 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| DZA54_RS24855 () | 18761..19744 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| DZA54_RS24860 () | 20243..20782 | + | 540 | WP_001447712.1 | hypothetical protein | - |
| DZA54_RS24865 () | 20787..21074 | + | 288 | WP_000127321.1 | hypothetical protein | - |
| DZA54_RS24870 () | 21059..22159 | + | 1101 | WP_000350011.1 | plasmid replication protein | - |
| DZA54_RS26060 () | 22945..23109 | + | 165 | WP_014342194.1 | hypothetical protein | - |
| DZA54_RS24885 () | 23196..23630 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| DZA54_RS24890 () | 23648..24763 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| DZA54_RS26065 () | 24907..25035 | + | 129 | WP_002210560.1 | hypothetical protein | - |
| DZA54_RS24895 () | 25032..25640 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| DZA54_RS24900 () | 25645..26166 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| DZA54_RS24905 () | 26169..26690 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| DZA54_RS24910 () | 26787..27260 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| DZA54_RS24915 () | 27271..27564 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| DZA54_RS24920 () | 27569..28423 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| DZA54_RS24925 () | 28423..29382 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| DZA54_RS24930 () | 29398..30258 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| DZA54_RS24935 () | 30292..30720 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| DZA54_RS24940 () | 30777..31136 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| DZA54_RS24945 () | 31136..31582 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| DZA54_RS24950 () | 31579..32097 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| DZA54_RS24955 () | 32097..32327 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| DZA54_RS24960 () | 32314..33171 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| DZA54_RS24965 () | 33239..33385 | + | 147 | WP_014342196.1 | hypothetical protein | - |
| DZA54_RS24970 () | 33402..33929 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| DZA54_RS24975 () | 33987..34259 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| DZA54_RS24980 () | 34347..34640 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| DZA54_RS24985 () | 34667..34969 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| DZA54_RS24990 () | 34974..35324 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DZA54_RS24995 () | 35487..36035 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| DZA54_RS26070 () | 36157..36348 | - | 192 | WP_014342197.1 | hypothetical protein | - |
| DZA54_RS25005 () | 36376..36570 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| DZA54_RS25010 () | 36581..36952 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| DZA54_RS25015 () | 36945..37268 | + | 324 | WP_119890243.1 | hypothetical protein | - |
| DZA54_RS25020 () | 37159..37863 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DZA54_RS25025 () | 37928..38107 | - | 180 | Protein_55 | helix-turn-helix transcriptional regulator | - |
| DZA54_RS25030 () | 38414..39118 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DZA54_RS26075 () | 39124..39264 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| DZA54_RS25040 () | 39750..40487 | + | 738 | WP_001366550.1 | recombinase family protein | - |
| DZA54_RS25045 () | 40484..40708 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| DZA54_RS25050 () | 40919..42412 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| DZA54_RS25055 () | 42443..43327 | + | 885 | WP_012728215.1 | DUF3363 domain-containing protein | - |
| DZA54_RS25060 () | 43544..44758 | + | 1215 | WP_012728216.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| DZA54_RS25065 () | 44786..45091 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| DZA54_RS25070 () | 45203..45391 | + | 189 | Protein_64 | IS91 family transposase | - |
| DZA54_RS25075 () | 45358..46557 | - | 1200 | WP_000804063.1 | tetracycline efflux MFS transporter Tet(A) | - |
| DZA54_RS25080 () | 46663..47313 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| DZA54_RS25085 () | 47345..47587 | - | 243 | WP_000844627.1 | transposase | - |
| DZA54_RS25090 () | 47786..47989 | - | 204 | Protein_68 | mobilization protein (MobL-like) | - |
| DZA54_RS25095 () | 47893..48729 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| DZA54_RS25100 () | 48729..49532 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| DZA54_RS25105 () | 49593..50408 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| DZA54_RS25110 () | 50432..50509 | + | 78 | Protein_72 | transcriptional regulator | - |
| DZA54_RS25115 () | 50715..51026 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| DZA54_RS26080 () | 51041..51172 | - | 132 | WP_014342215.1 | hypothetical protein | - |
| DZA54_RS25120 () | 51200..51985 | + | 786 | WP_001151304.1 | ParA family protein | - |
| DZA54_RS25125 () | 51989..53170 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| DZA54_RS25130 () | 53219..53491 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| DZA54_RS25135 () | 53544..54179 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| DZA54_RS26085 () | 54271..54414 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| DZA54_RS25140 () | 54741..55118 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| DZA54_RS26090 () | 55111..55290 | + | 180 | Protein_81 | hypothetical protein | - |
| DZA54_RS26095 () | 55261..55380 | - | 120 | WP_014342216.1 | hypothetical protein | - |
| DZA54_RS25150 () | 55367..56041 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| DZA54_RS25155 () | 56109..56540 | + | 432 | WP_001326170.1 | hypothetical protein | - |
| DZA54_RS25160 () | 56546..56857 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| DZA54_RS25165 () | 56866..57366 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| DZA54_RS25170 () | 57370..58797 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| DZA54_RS25175 () | 58797..59453 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| DZA54_RS25180 () | 59509..60126 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| DZA54_RS25190 () | 60338..60637 | + | 300 | WP_001326171.1 | hypothetical protein | - |
| DZA54_RS25195 () | 60728..61216 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| DZA54_RS25200 () | 61231..63195 | - | 1965 | Protein_92 | DNA topoisomerase III | - |
| DZA54_RS25205 () | 63248..63952 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DZA54_RS25210 () | 64017..65303 | - | 1287 | Protein_94 | transposase | - |
| DZA54_RS25220 () | 65342..66010 | - | 669 | WP_001300294.1 | EAL domain-containing protein | - |
| DZA54_RS25225 () | 66046..66282 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| DZA54_RS25230 () | 66279..66641 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| DZA54_RS25235 () | 66659..67168 | - | 510 | Protein_98 | hypothetical protein | - |
| DZA54_RS25240 () | 67317..68153 | - | 837 | WP_012728227.1 | TEM family class A beta-lactamase | - |
| DZA54_RS25250 () | 68193..68897 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| DZA54_RS25255 () | 69107..70096 | - | 990 | WP_001276635.1 | DUF3330 domain-containing protein | - |
| DZA54_RS25260 () | 70093..70329 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| DZA54_RS25265 () | 70326..70691 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| DZA54_RS25270 () | 70803..71441 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| DZA54_RS25275 () | 71456..73141 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| DZA54_RS25280 () | 73213..73488 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| DZA54_RS25285 () | 73504..73854 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| DZA54_RS25290 () | 73926..74360 | + | 435 | WP_000414383.1 | mercury resistance transcriptional regulator MerR | - |
| DZA54_RS25295 () | 74460..75464 | + | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| DZA54_RS25300 () | 75741..75860 | + | 120 | Protein_110 | permease | - |
| DZA54_RS26100 () | 75870..75986 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| DZA54_RS25305 () | 76267..76971 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DZA54_RS25310 () | 77028..77498 | - | 471 | Protein_113 | lipocalin family protein | - |
| DZA54_RS25315 () | 77592..78737 | - | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| DZA54_RS25320 () | 79061..80323 | - | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| DZA54_RS25325 () | 80608..81000 | - | 393 | WP_000479535.1 | hypothetical protein | - |
| DZA54_RS25330 () | 81004..81582 | - | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| DZA54_RS25335 () | 81579..82892 | - | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| DZA54_RS25340 () | 82892..83809 | - | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| DZA54_RS25345 () | 83793..84419 | - | 627 | WP_001049717.1 | hypothetical protein | - |
| DZA54_RS25350 () | 84416..84697 | - | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| DZA54_RS25355 () | 84842..85219 | - | 378 | WP_001326174.1 | hypothetical protein | - |
| DZA54_RS25360 () | 85543..86205 | - | 663 | WP_001231464.1 | hypothetical protein | - |
| DZA54_RS25365 () | 86205..86582 | - | 378 | WP_000869297.1 | hypothetical protein | - |
| DZA54_RS25370 () | 86592..87038 | - | 447 | WP_000122507.1 | hypothetical protein | - |
| DZA54_RS25375 () | 87048..87677 | - | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| DZA54_RS25380 () | 87634..88218 | - | 585 | WP_000332868.1 | hypothetical protein | - |
| DZA54_RS25385 () | 88229..90088 | - | 1860 | WP_040062214.1 | conjugative transfer system coupling protein TraD | - |
| DZA54_RS25390 () | 90091..93063 | - | 2973 | WP_001326173.1 | TraI domain-containing protein | - |
| DZA54_RS25395 () | 93231..93848 | + | 618 | WP_001249395.1 | hypothetical protein | - |
| DZA54_RS25400 () | 93830..94063 | + | 234 | WP_001191890.1 | hypothetical protein | - |
| DZA54_RS25405 () | 94063..94296 | + | 234 | Protein_132 | DNA topoisomerase III | - |
| DZA54_RS25410 () | 94362..95066 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| DZA54_RS25420 () | 95609..96049 | + | 441 | WP_001326394.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|