MGE detailed information
MGE type: IS/Tn MGE length: 273 bp
Accession: NZ_CP032329 Location: 3427446..3427718 Organism: Xenorhabdus nematophila strain YL001 Replicon: chromosome
Accession: NZ_CP032329 Location: 3427446..3427718 Organism: Xenorhabdus nematophila strain YL001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D3790_RS15580 () | 3422633..3422773 | + | 141 | WP_004093983.1 | 50S ribosomal protein L34 | - |
| D3790_RS15585 () | 3422792..3423151 | + | 360 | WP_071827907.1 | ribonuclease P protein component | - |
| D3790_RS15590 () | 3423115..3423372 | + | 258 | WP_038219394.1 | membrane protein insertion efficiency factor YidD | - |
| D3790_RS15595 () | 3423375..3425012 | + | 1638 | WP_038219392.1 | membrane protein insertase YidC | - |
| D3790_RS15600 () | 3425131..3426495 | + | 1365 | WP_038219388.1 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | - |
| D3790_RS15605 () | 3426674..3426928 | + | 255 | WP_041979744.1 | AAA family ATPase | - |
| D3790_RS15610 () | 3426947..3427288 | + | 342 | WP_041979746.1 | hypothetical protein | - |
| D3790_RS15615 () | 3427371..3427718 | + | 348 | Protein_2974 | ISAs1 family transposase ISXne3 | Transposase |
| D3790_RS15620 () | 3427691..3428044 | - | 354 | WP_072021876.1 | M28 family peptidase | - |
| D3790_RS15625 () | 3427980..3428462 | - | 483 | WP_010846161.1 | hypothetical protein | - |
| D3790_RS15630 () | 3429223..3429777 | + | 555 | WP_038219384.1 | cytochrome b | - |
| D3790_RS15635 () | 3429798..3430379 | + | 582 | WP_010846163.1 | YceI family protein | - |
| D3790_RS15640 () | 3430537..3430850 | + | 314 | Protein_2979 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D3790_RS15645 () | 3430847..3431128 | + | 282 | WP_010846165.1 | helix-turn-helix transcriptional regulator | - |
| D3790_RS15650 () | 3431433..3431696 | + | 264 | WP_038219381.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| D3790_RS15655 () | 3431696..3432085 | + | 390 | WP_013185764.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|