MGE detailed information
MGE type: Prophage MGE length: 17175 bp
Accession: NZ_CP032329 Location: 3236514..3253688 Organism: Xenorhabdus nematophila strain YL001 Replicon: chromosome
Accession: NZ_CP032329 Location: 3236514..3253688 Organism: Xenorhabdus nematophila strain YL001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D3790_RS14580 () | 3232037..3232483 | - | 447 | WP_038219114.1 | DUF805 domain-containing protein | - |
| D3790_RS14585 () | 3232542..3233162 | + | 621 | WP_038219100.1 | DUF1454 family protein | - |
| D3790_RS14590 () | 3233251..3234018 | + | 768 | WP_038219101.1 | triose-phosphate isomerase | - |
| D3790_RS14600 () | 3234534..3235310 | + | 777 | WP_010847657.1 | type IV toxin-antitoxin system AbiEi family antitoxin | - |
| D3790_RS14605 () | 3235373..3236272 | + | 900 | WP_041979641.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| D3790_RS14610 () | 3236514..3236912 | - | 399 | WP_013183155.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| D3790_RS14615 () | 3236909..3237130 | - | 222 | WP_010847654.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| D3790_RS14620 () | 3237389..3237949 | - | 561 | Protein_2787 | DUF4102 domain-containing protein | - |
| D3790_RS14630 () | 3238277..3239101 | - | 825 | WP_038219103.1 | DNA damage-inducible protein D | - |
| D3790_RS14640 () | 3239811..3240023 | - | 213 | WP_113935543.1 | ogr/Delta-like zinc finger family protein | - |
| D3790_RS14645 () | 3240310..3243030 | - | 2721 | WP_041979642.1 | TOPRIM and DUF927 domain-containing protein | - |
| D3790_RS14650 () | 3243030..3243248 | - | 219 | WP_010847644.1 | hypothetical protein | - |
| D3790_RS14655 () | 3243251..3243763 | - | 513 | WP_010847643.1 | host cell division inhibitor Icd-like protein | - |
| D3790_RS14660 () | 3243835..3244356 | - | 522 | WP_038219106.1 | GPO family capsid scaffolding protein | - |
| D3790_RS14665 () | 3244353..3245291 | - | 939 | Protein_2794 | P2 family phage major capsid protein | - |
| D3790_RS14670 () | 3245302..3246342 | - | 1041 | WP_119365299.1 | IS630 family transposase ISPlu10 | Transposase |
| D3790_RS14675 () | 3246541..3247380 | - | 840 | WP_038219690.1 | hypothetical protein | - |
| D3790_RS14680 () | 3247525..3247768 | - | 244 | Protein_2797 | helix-turn-helix domain-containing protein | - |
| D3790_RS14685 () | 3248172..3248918 | - | 747 | WP_013183143.1 | hypothetical protein | - |
| D3790_RS14690 () | 3248915..3249679 | - | 765 | WP_081990793.1 | Prophage integrase IntA ; Integrase | Integrase |
| D3790_RS14695 () | 3249779..3250642 | - | 864 | WP_010847637.1 | YicC family protein | - |
| D3790_RS14700 () | 3250768..3251511 | + | 744 | WP_010847636.1 | ribonuclease PH | - |
| D3790_RS14705 () | 3251588..3252229 | + | 642 | WP_010847635.1 | orotate phosphoribosyltransferase | - |
| D3790_RS14710 () | 3252486..3253085 | - | 600 | WP_038219688.1 | nucleoid occlusion factor SlmA | - |
| D3790_RS14715 () | 3253230..3253688 | - | 459 | WP_010847633.1 | dUTP diphosphatase | - |
| D3790_RS14720 () | 3253666..3254895 | - | 1230 | WP_010847632.1 | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC | - |
| D3790_RS14725 () | 3255239..3255931 | + | 693 | WP_010847631.1 | DNA repair protein RadC | - |
| D3790_RS14735 () | 3256193..3256429 | + | 237 | WP_010847630.1 | 50S ribosomal protein L28 | - |
| D3790_RS14740 () | 3256441..3256608 | + | 168 | WP_010847629.1 | 50S ribosomal protein L33 | - |
| D3790_RS14745 () | 3256764..3257882 | + | 1119 | WP_041979566.1 | glycosyltransferase family 4 protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|