MGE detailed information
MGE type: Genomic_island MGE length: 58530 bp
Accession: NZ_CP032066 Location: 2536754..2595283 Organism: Escherichia coli strain E166 Replicon: chromosome
Accession: NZ_CP032066 Location: 2536754..2595283 Organism: Escherichia coli strain E166 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D2J89_RS12140 (2532120) | 2532120..2532683 | + | 564 | WP_001115149.1 | type II secretion system minor pseudopilin GspH | - |
| D2J89_RS12145 (2532680) | 2532680..2533051 | + | 372 | WP_000820091.1 | type II secretion system minor pseudopilin GspI | - |
| D2J89_RS12150 (2533048) | 2533048..2533653 | + | 606 | WP_001318033.1 | type II secretion system minor pseudopilin GspJ | - |
| D2J89_RS12155 (2533650) | 2533650..2534627 | + | 978 | WP_000633196.1 | type II secretion system minor pseudopilin GspK | - |
| D2J89_RS12160 (2534624) | 2534624..2535802 | + | 1179 | WP_000097200.1 | type II secretion system protein GspL | - |
| D2J89_RS12165 (2535804) | 2535804..2536340 | + | 537 | WP_000942807.1 | GspM family type II secretion system protein YghD | - |
| D2J89_RS12170 (2536754) | 2536754..2537080 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D2J89_RS12175 (2537077) | 2537077..2537340 | - | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| D2J89_RS12180 (2537412) | 2537412..2538278 | - | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| D2J89_RS12185 (2538363) | 2538363..2538560 | - | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| D2J89_RS12190 (2538572) | 2538572..2539063 | - | 492 | WP_023155722.1 | DUF5983 family protein | - |
| D2J89_RS12195 (2539060) | 2539060..2539437 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| D2J89_RS12200 (2539484) | 2539484..2539858 | - | 375 | WP_032153712.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| D2J89_RS12205 (2539938) | 2539938..2540159 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| D2J89_RS12210 (2540228) | 2540228..2540704 | - | 477 | WP_001186715.1 | RadC family protein | - |
| D2J89_RS12215 (2540720) | 2540720..2541205 | - | 486 | WP_032153711.1 | antirestriction protein | - |
| D2J89_RS12220 (2541297) | 2541297..2542115 | - | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| D2J89_RS12225 (2542206) | 2542206..2542415 | - | 210 | WP_023155727.1 | DUF905 family protein | - |
| D2J89_RS12230 (2542445) | 2542445..2543122 | - | 678 | WP_023155728.1 | hypothetical protein | - |
| D2J89_RS12235 (2543241) | 2543241..2544125 | - | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| D2J89_RS12240 (2544232) | 2544232..2545164 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| D2J89_RS12245 (2545161) | 2545161..2545970 | - | 810 | WP_032153709.1 | hypothetical protein | - |
| D2J89_RS12250 (2547721) | 2547721..2548452 | + | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| D2J89_RS25825 (2548546) | 2548546..2548701 | - | 156 | WP_020923993.1 | hypothetical protein | - |
| D2J89_RS25830 (2548725) | 2548725..2548985 | + | 261 | WP_223362175.1 | hypothetical protein | - |
| D2J89_RS25835 (2548997) | 2548997..2549203 | - | 207 | WP_025492114.1 | hypothetical protein | - |
| D2J89_RS12260 (2549637) | 2549637..2551241 | + | 1605 | WP_001067608.1 | YfjI family protein | - |
| D2J89_RS12265 (2552838) | 2552838..2553404 | + | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| D2J89_RS12270 (2553524) | 2553524..2553673 | - | 150 | WP_001421645.1 | hypothetical protein | - |
| D2J89_RS12275 (2553688) | 2553688..2554260 | + | 573 | WP_032153703.1 | hypothetical protein | - |
| D2J89_RS12280 (2554329) | 2554329..2554565 | + | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| D2J89_RS12285 (2554834) | 2554834..2555382 | + | 549 | WP_032153702.1 | hypothetical protein | - |
| D2J89_RS12290 (2555401) | 2555401..2555649 | - | 249 | WP_001349534.1 | ProQ/FINO family protein | - |
| D2J89_RS12295 (2555718) | 2555718..2555909 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| D2J89_RS12300 (2556312) | 2556312..2557003 | - | 692 | Protein_2414 | IS1 family transposase | - |
| D2J89_RS12305 (2557063) | 2557063..2557239 | + | 177 | Protein_2415 | transketolase family protein | - |
| D2J89_RS25840 (2557428) | 2557428..2557603 | + | 176 | Protein_2416 | transposase | - |
| D2J89_RS12320 (2558886) | 2558886..2559185 | - | 300 | WP_251364689.1 | P fimbrial regulatory protein KS71A | VF |
| D2J89_RS12325 (2559608) | 2559608..2559922 | + | 315 | WP_000930062.1 | Major pilu subunit operon regulatory protein PapB | VF |
| D2J89_RS12330 (2560129) | 2560129..2560392 | + | 264 | Protein_2419 | Pap fimbrial major pilin protein | VF |
| D2J89_RS12335 (2560843) | 2560843..2562075 | - | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| D2J89_RS12340 (2562226) | 2562226..2563387 | - | 1162 | Protein_2421 | IS3 family transposase IS3 | Transposase |
| D2J89_RS12345 (2563555) | 2563555..2564535 | + | 981 | WP_000174035.1 | thymidylate synthase | - |
| D2J89_RS12350 (2564532) | 2564532..2565476 | + | 945 | WP_000820616.1 | hypothetical protein | - |
| D2J89_RS12355 (2565479) | 2565479..2566561 | - | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| D2J89_RS12360 (2567028) | 2567028..2567294 | + | 267 | WP_032153698.1 | MazG-like family protein | - |
| D2J89_RS12365 (2567594) | 2567594..2568108 | - | 515 | Protein_2426 | ISL3 family transposase ISEc38 | Transposase |
| D2J89_RS12370 (2568716) | 2568716..2572129 | + | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| D2J89_RS12375 (2572193) | 2572193..2573827 | + | 1635 | WP_000627728.1 | class I SAM-dependent DNA methyltransferase | - |
| D2J89_RS12380 (2573824) | 2573824..2574966 | + | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| D2J89_RS12385 (2574975) | 2574975..2576597 | + | 1623 | WP_000778955.1 | AAA family ATPase | - |
| D2J89_RS12390 (2576597) | 2576597..2577493 | + | 897 | WP_000499115.1 | hypothetical protein | - |
| D2J89_RS12395 (2577716) | 2577716..2577894 | - | 179 | Protein_2432 | integrase | - |
| D2J89_RS12400 (2578124) | 2578124..2578861 | + | 738 | WP_001398114.1 | OmpW family outer membrane protein | - |
| D2J89_RS12405 (2579281) | 2579281..2580177 | + | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| D2J89_RS12410 (2580226) | 2580226..2581305 | + | 1080 | WP_001207396.1 | hypothetical protein | - |
| D2J89_RS12415 (2581352) | 2581352..2582923 | + | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| D2J89_RS12420 (2582920) | 2582920..2583186 | + | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| D2J89_RS12425 (2583326) | 2583326..2583523 | + | 198 | WP_001238004.1 | hypothetical protein | - |
| D2J89_RS12430 (2583576) | 2583576..2585249 | + | 1674 | WP_025492097.1 | sulfatase-like hydrolase/transferase | - |
| D2J89_RS12435 (2585393) | 2585393..2586427 | - | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| D2J89_RS12440 (2586477) | 2586477..2586752 | + | 276 | WP_023181049.1 | IS1 family transposase IS1A | Transposase |
| D2J89_RS25845 (2586671) | 2586671..2587114 | + | 444 | WP_021547728.1 | IS1 family transposase | - |
| D2J89_RS12450 (2587692) | 2587692..2589086 | - | 1395 | WP_001037798.1 | carbohydrate porin | - |
| D2J89_RS12455 (2589281) | 2589281..2590711 | - | 1431 | WP_000813678.1 | glycoside hydrolase family 32 protein | - |
| D2J89_RS12460 (2590711) | 2590711..2591988 | - | 1278 | WP_001083368.1 | MFS transporter | - |
| D2J89_RS12465 (2592051) | 2592051..2594177 | - | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| D2J89_RS12470 (2594273) | 2594273..2595283 | - | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| D2J89_RS12475 (2595433) | 2595433..2596617 | - | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| D2J89_RS12485 (2596975) | 2596975..2597682 | - | 708 | WP_000234526.1 | DUF554 domain-containing protein | - |
| D2J89_RS12490 (2598074) | 2598074..2600209 | + | 2136 | WP_212406926.1 | ornithine decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|