MGE detailed information
MGE type: Genomic_island MGE length: 65523 bp
Accession: NZ_CP031922 Location: 5144655..5210177 Organism: Escherichia coli O26:H11 strain FWSEC0001 Replicon: chromosome
Accession: NZ_CP031922 Location: 5144655..5210177 Organism: Escherichia coli O26:H11 strain FWSEC0001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B9S25_RS27005 () | 5140750..5141325 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| B9S25_RS27015 () | 5141705..5142970 | + | 1266 | WP_001218841.1 | integrase arm-type DNA-binding domain-containing protein | - |
| B9S25_RS27020 () | 5143087..5144658 | - | 1572 | WP_032325301.1 | IS66 family transposase | - |
| B9S25_RS27025 () | 5144655..5146274 | - | 1620 | WP_001375513.1 | ISL3 family transposase ISEc38 | Transposase |
| B9S25_RS27030 () | 5146370..5147149 | + | 780 | Protein_5168 | IS4 family transposase ISEc13 | Transposase |
| B9S25_RS27045 () | 5147937..5149586 | + | 1650 | WP_001121617.1 | hypothetical protein | VF |
| B9S25_RS27050 () | 5149804..5149953 | + | 150 | Protein_5170 | IS1 family transposase | - |
| B9S25_RS27055 () | 5150194..5151183 | + | 990 | WP_000953025.1 | hypothetical protein | VF |
| B9S25_RS27060 () | 5151232..5151906 | + | 675 | WP_000609742.1 | hypothetical protein | VF |
| B9S25_RS27065 () | 5152242..5153183 | + | 942 | Protein_5173 | IS630 family transposase ISEc33 | Transposase |
| B9S25_RS27070 () | 5153784..5163455 | + | 9672 | WP_001239078.1 | Toxin B | VF |
| B9S25_RS27075 () | 5163627..5163977 | + | 351 | Protein_5175 | IS256 family transposase ISEic2 | Transposase |
| B9S25_RS27080 () | 5164390..5165013 | - | 624 | WP_001443729.1 | Secreted effector protein EspF(U) | VF |
| B9S25_RS27085 () | 5165229..5165507 | - | 279 | WP_000245867.1 | hypothetical protein | VF |
| B9S25_RS27090 () | 5165513..5165734 | - | 222 | WP_001053840.1 | hypothetical protein | VF |
| B9S25_RS27095 () | 5165771..5166178 | - | 408 | WP_000228587.1 | hypothetical protein | VF |
| B9S25_RS27100 () | 5166185..5167129 | - | 945 | WP_044862061.1 | Protein EaeB | VF |
| B9S25_RS27105 () | 5167150..5168292 | - | 1143 | WP_000935768.1 | hypothetical protein | VF |
| B9S25_RS27110 () | 5168305..5168883 | - | 579 | WP_000381555.1 | Secreted effector protein SseB | VF |
| B9S25_RS27115 () | 5168941..5169996 | - | 1056 | WP_001273459.1 | hypothetical protein | VF |
| B9S25_RS27120 () | 5170139..5171359 | + | 1221 | WP_000953242.1 | hypothetical protein | VF |
| B9S25_RS27125 () | 5171574..5174393 | - | 2820 | WP_044862060.1 | Intimin | VF |
| B9S25_RS27130 () | 5174454..5174924 | - | 471 | WP_000098786.1 | Tir chaperone | VF |
| B9S25_RS27135 () | 5175057..5176673 | - | 1617 | WP_001121330.1 | Translocated intimin receptor Tir | VF |
| B9S25_RS27140 () | 5177120..5177731 | - | 612 | WP_000492643.1 | hypothetical protein | VF |
| B9S25_RS27145 () | 5177982..5178341 | + | 360 | WP_001005230.1 | hypothetical protein | VF |
| B9S25_RS27150 () | 5178560..5179075 | - | 516 | WP_001360071.1 | hypothetical protein | VF |
| B9S25_RS27155 () | 5179106..5180023 | - | 918 | WP_001050796.1 | hypothetical protein | VF |
| B9S25_RS27160 () | 5179986..5180402 | - | 417 | WP_001443671.1 | hypothetical protein | VF |
| B9S25_RS27165 () | 5180395..5180715 | - | 321 | WP_001062953.1 | hypothetical protein | VF |
| B9S25_RS27170 () | 5180775..5182115 | - | 1341 | WP_000599711.1 | putative ATP synthase YscN | VF |
| B9S25_RS27175 () | 5182099..5184126 | - | 2028 | WP_001037820.1 | Secretion system apparatus protein SsaV | VF |
| B9S25_RS27180 () | 5184123..5184476 | - | 354 | WP_001050414.1 | hypothetical protein | VF |
| B9S25_RS27185 () | 5184660..5184962 | + | 303 | WP_000338348.1 | hypothetical protein | VF |
| B9S25_RS27190 () | 5185046..5185423 | + | 378 | WP_001059794.1 | hypothetical protein | VF |
| B9S25_RS27195 () | 5185425..5185997 | + | 573 | WP_001233824.1 | Yop proteins translocation lipoprotein J | VF |
| B9S25_RS27200 () | 5186003..5186458 | + | 456 | WP_001063688.1 | hypothetical protein | VF |
| B9S25_RS27205 () | 5186458..5187996 | + | 1539 | WP_000723928.1 | Type III secretion system outer membrane protein SpiA | VF |
| B9S25_RS27210 () | 5188010..5188465 | + | 456 | WP_000087469.1 | Chaperone protein SicA | VF |
| B9S25_RS27215 () | 5188851..5189264 | - | 414 | WP_000534969.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| B9S25_RS27220 () | 5189339..5189695 | - | 357 | WP_000605356.1 | nucleoside transporter | - |
| B9S25_RS27225 () | 5189892..5190350 | + | 459 | WP_001342442.1 | hypothetical protein | VF |
| B9S25_RS27230 () | 5190347..5191384 | - | 1038 | WP_001291687.1 | Yop proteins translocation protein U | VF |
| B9S25_RS27235 () | 5191377..5192153 | - | 777 | WP_001002808.1 | Surface presentation of antigens protein SpaR | VF |
| B9S25_RS27240 () | 5192153..5192422 | - | 270 | WP_000447503.1 | hypothetical protein | VF |
| B9S25_RS27245 () | 5192422..5193075 | - | 654 | WP_001299990.1 | Surface presentation of antigens protein SpaP | VF |
| B9S25_RS27250 () | 5193080..5193733 | - | 654 | WP_000780744.1 | hypothetical protein | VF |
| B9S25_RS27255 () | 5193720..5194319 | - | 600 | WP_000153999.1 | hypothetical protein | VF |
| B9S25_RS27260 () | 5194316..5194630 | - | 315 | WP_000084152.1 | hypothetical protein | VF |
| B9S25_RS27265 () | 5194643..5194861 | - | 219 | WP_000628726.1 | hypothetical protein | VF |
| B9S25_RS27270 () | 5194876..5195247 | - | 372 | WP_001365456.1 | type III secretion system LEE master regulator Ler | - |
| B9S25_RS27275 () | 5196455..5197600 | + | 1146 | WP_000606968.1 | Cysteine protease-like VirA | VF |
| B9S25_RS27280 () | 5197747..5198565 | + | 819 | WP_000821600.1 | YjiK family protein | - |
| B9S25_RS27285 () | 5198771..5199346 | + | 576 | Protein_5217 | hypothetical protein | VF |
| B9S25_RS27290 () | 5199393..5199943 | + | 551 | Protein_5218 | IS3 family transposase IS2 | Transposase |
| B9S25_RS27295 () | 5199928..5200077 | + | 150 | WP_071527582.1 | DUF957 domain-containing protein | - |
| B9S25_RS27300 () | 5200826..5202364 | + | 1539 | WP_044861989.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| B9S25_RS27310 () | 5202730..5204064 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| B9S25_RS27315 () | 5204144..5206291 | + | 2148 | WP_044861990.1 | lysine decarboxylase CadA | - |
| B9S25_RS27320 () | 5206350..5207807 | + | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| B9S25_RS27325 () | 5208044..5209561 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| B9S25_RS27330 () | 5209680..5209853 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| B9S25_RS27335 () | 5209881..5210177 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| B9S25_RS27340 () | 5210404..5210676 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| B9S25_RS27345 () | 5210688..5210918 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| B9S25_RS27350 () | 5211099..5212730 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| B9S25_RS27355 () | 5212727..5213446 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|