MGE detailed information
MGE type: Genomic_island MGE length: 21240 bp
Accession: NZ_CP031913 Location: 4670990..4692229 Organism: Escherichia coli O157:H7 strain FWSEC0004 Replicon: chromosome
Accession: NZ_CP031913 Location: 4670990..4692229 Organism: Escherichia coli O157:H7 strain FWSEC0004 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAM50_RS23980 () | 4666716..4667258 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| CAM50_RS23985 () | 4667551..4669701 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| CAM50_RS23990 () | 4669751..4669954 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| CAM50_RS23995 () | 4669965..4670921 | + | 957 | WP_001297640.1 | GTPase | - |
| CAM50_RS24000 () | 4670990..4672348 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| CAM50_RS24005 () | 4672357..4672641 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| CAM50_RS24010 () | 4672919..4675351 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| CAM50_RS24015 () | 4675418..4676887 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| CAM50_RS24020 () | 4676887..4678641 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4678791..4678867 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4678791..4678867 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4678791..4678867 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4678791..4678867 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4678791..4678867 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4678791..4678867 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4678791..4678867 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4678791..4678867 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| CAM50_RS24025 () | 4678862..4679203 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| CAM50_RS24030 () | 4679250..4680413 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| CAM50_RS24035 () | 4680461..4681342 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| CAM50_RS24040 () | 4681439..4681603 | - | 165 | WP_000394269.1 | DUF1127 domain-containing protein | - |
| CAM50_RS24045 () | 4681780..4683192 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| CAM50_RS28140 () | 4683435..4683635 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| CAM50_RS24050 () | 4683640..4684392 | - | 753 | Protein_4581 | Recombination-promoting nuclease RpnD | VF |
| CAM50_RS24055 () | 4684859..4686091 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| CAM50_RS24060 () | 4686132..4687403 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| CAM50_RS24065 () | 4687519..4688670 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| CAM50_RS24070 () | 4688680..4689447 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| CAM50_RS24075 () | 4689444..4689710 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| CAM50_RS24080 () | 4690022..4692229 | + | 2208 | WP_000535072.1 | hypothetical protein | VF |
| CAM50_RS24090 () | 4692495..4693337 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| CAM50_RS24095 () | 4693405..4694583 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |