MGE detailed information
MGE type: Genomic_island MGE length: 26487 bp
Accession: NZ_CP031833 Location: 4358531..4385017 Organism: Escherichia coli strain 2452 Replicon: chromosome
Accession: NZ_CP031833 Location: 4358531..4385017 Organism: Escherichia coli strain 2452 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0R13_RS22375 () | 4354960..4358319 | - | 3360 | WP_023281478.1 | STY4851/ECs_5259 family protein | - |
| D0R13_RS22380 () | 4358531..4360183 | + | 1653 | WP_000880884.1 | MotA/TolQ/ExbB proton channel family protein | - |
| D0R13_RS22385 () | 4360190..4360897 | + | 708 | WP_000357807.1 | OmpA family protein | - |
| D0R13_RS22390 () | 4360901..4362004 | + | 1104 | WP_000777276.1 | HNH endonuclease | - |
| D0R13_RS22395 () | 4362229..4362471 | + | 243 | Protein_4096 | N-acetylneuraminic acid mutarotase | - |
| D0R13_RS22400 () | 4362559..4363539 | + | 981 | WP_000019446.1 | IS5-like element ISKpn26 family transposase | - |
| D0R13_RS22410 () | 4363688..4364047 | - | 360 | Protein_4098 | WYL domain-containing protein | - |
| D0R13_RS22415 () | 4364467..4365204 | - | 738 | WP_039023583.1 | porin family protein | - |
| D0R13_RS22420 () | 4365544..4366392 | + | 849 | Protein_4100 | IS3 family transposase | - |
| D0R13_RS22425 () | 4366571..4367194 | - | 624 | WP_032216521.1 | hypothetical protein | - |
| D0R13_RS22430 () | 4367283..4367783 | - | 501 | WP_032216520.1 | hypothetical protein | - |
| D0R13_RS22440 () | 4368051..4368284 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| D0R13_RS25040 () | 4368353..4368925 | - | 573 | WP_000991606.1 | hypothetical protein | - |
| D0R13_RS25045 () | 4368940..4369089 | + | 150 | WP_001385640.1 | hypothetical protein | - |
| D0R13_RS22450 () | 4369309..4370040 | - | 732 | WP_039023502.1 | inovirus Gp2 family protein | - |
| D0R13_RS22455 () | 4371794..4372603 | + | 810 | WP_000816117.1 | hypothetical protein | - |
| D0R13_RS22460 () | 4372600..4373292 | - | 693 | Protein_4108 | hypothetical protein | - |
| D0R13_RS22465 () | 4373272..4374126 | + | 855 | WP_117355322.1 | DUF4942 domain-containing protein | - |
| D0R13_RS22470 () | 4374198..4374461 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| D0R13_RS22475 () | 4374458..4374784 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| D0R13_RS22485 () | 4375667..4377205 | + | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| D0R13_RS22490 () | 4377570..4378904 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| D0R13_RS22495 () | 4378984..4381131 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| D0R13_RS22500 () | 4381190..4382647 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| D0R13_RS22505 () | 4382884..4384401 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| D0R13_RS22510 () | 4384520..4384693 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| D0R13_RS22515 () | 4384721..4385017 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| D0R13_RS22525 () | 4385244..4385516 | - | 273 | WP_117355323.1 | N-acetyltransferase | - |
| D0R13_RS22530 () | 4385528..4385758 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| D0R13_RS22535 () | 4385939..4387570 | + | 1632 | WP_094319283.1 | sensor histidine kinase | - |
| D0R13_RS22540 () | 4387567..4388286 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|