MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 101882 bp
Accession: NZ_CP031453 Location: 1..101882 Organism: Burkholderia gladioli strain Lv-StA Replicon: plasmid unnamed2
Accession: NZ_CP031453 Location: 1..101882 Organism: Burkholderia gladioli strain Lv-StA Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DX980_RS20455 (DX980_20365) | 171..695 | - | 525 | WP_160293847.1 | hypothetical protein | - |
| DX980_RS20460 (DX980_20370) | 695..1648 | - | 954 | WP_160293848.1 | hypothetical protein | - |
| DX980_RS20465 (DX980_20375) | 1943..2335 | - | 393 | WP_160293849.1 | hypothetical protein | - |
| DX980_RS20470 | 2268..3341 | - | 1074 | WP_160293850.1 | hypothetical protein | - |
| DX980_RS20475 (DX980_20380) | 3349..3708 | - | 360 | WP_160293851.1 | hypothetical protein | - |
| DX980_RS20480 (DX980_20385) | 3714..3938 | - | 225 | WP_160293852.1 | hypothetical protein | - |
| DX980_RS20485 (DX980_20390) | 3942..4970 | - | 1029 | WP_160293853.1 | Type IV secretion system protein VirB11 | VF |
| DX980_RS20490 (DX980_20395) | 4954..5745 | - | 792 | WP_160293854.1 | Type IV secretion system protein virB1 | VF |
| DX980_RS20495 (DX980_20400) | 6382..6867 | + | 486 | WP_036031045.1 | hypothetical protein | - |
| DX980_RS20500 (DX980_20405) | 6879..9032 | + | 2154 | WP_160293855.1 | hypothetical protein | Relaxase |
| DX980_RS20505 (DX980_20410) | 9100..11205 | + | 2106 | WP_160293856.1 | type IV conjugative transfer system coupling protein TraD | - |
| DX980_RS20510 (DX980_20415) | 11192..11908 | + | 717 | WP_160293857.1 | DUF4400 domain-containing protein | - |
| DX980_RS20515 (DX980_20420) | 12011..12907 | + | 897 | WP_160293858.1 | LysR substrate-binding domain-containing protein | - |
| DX980_RS20520 (DX980_20425) | 13065..14354 | + | 1290 | WP_160293859.1 | MFS transporter | - |
| DX980_RS20525 (DX980_20430) | 14519..14800 | + | 282 | WP_160293860.1 | hypothetical protein | - |
| DX980_RS20530 (DX980_20435) | 15281..16177 | + | 897 | WP_160293940.1 | Chromosome partitioning protein ParA | VF |
| DX980_RS20535 (DX980_20440) | 16174..17847 | + | 1674 | WP_160293861.1 | hypothetical protein | - |
| DX980_RS20540 (DX980_20445) | 17844..18413 | + | 570 | WP_160293862.1 | hypothetical protein | - |
| DX980_RS20545 (DX980_20450) | 18502..18966 | + | 465 | WP_160293863.1 | hypothetical protein | - |
| DX980_RS20550 (DX980_20455) | 18963..19277 | + | 315 | WP_160293864.1 | hypothetical protein | - |
| DX980_RS20555 (DX980_20460) | 19261..19854 | + | 594 | WP_160293865.1 | hypothetical protein | - |
| DX980_RS20560 (DX980_20470) | 20188..21498 | + | 1311 | WP_160293866.1 | site-specific DNA-methyltransferase | - |
| DX980_RS20565 | 21626..21853 | + | 228 | WP_160293867.1 | hypothetical protein | - |
| DX980_RS20570 (DX980_20480) | 22073..22648 | + | 576 | WP_160293868.1 | hypothetical protein | - |
| DX980_RS20575 (DX980_20485) | 22796..24490 | + | 1695 | WP_160293869.1 | hypothetical protein | - |
| DX980_RS20580 (DX980_20490) | 24584..25579 | + | 996 | WP_160293870.1 | TIGR03761 family integrating conjugative element protein | - |
| DX980_RS20585 (DX980_20495) | 25576..26061 | + | 486 | WP_160293871.1 | DUF3158 family protein | - |
| DX980_RS20590 (DX980_20500) | 26119..26406 | + | 288 | WP_036030962.1 | hypothetical protein | - |
| DX980_RS20595 (DX980_20505) | 27122..28042 | + | 921 | WP_160293872.1 | hypothetical protein | - |
| DX980_RS20600 (DX980_20510) | 28394..29527 | + | 1134 | WP_230677819.1 | hypothetical protein | VF |
| DX980_RS20605 (DX980_20515) | 29547..30521 | + | 975 | WP_236669327.1 | ParB/RepB/Spo0J family partition protein | - |
| DX980_RS20610 (DX980_20520) | 30852..32180 | + | 1329 | WP_160293874.1 | replication protein O | - |
| DX980_RS20615 (DX980_20525) | 32285..32554 | + | 270 | WP_160293875.1 | hypothetical protein | - |
| DX980_RS20620 (DX980_20530) | 32864..33529 | - | 666 | WP_160293876.1 | hypothetical protein | - |
| DX980_RS20625 (DX980_20535) | 33827..35683 | - | 1857 | WP_160293877.1 | site-specific integrase | - |
| DX980_RS20630 (DX980_20540) | 36086..36730 | + | 645 | WP_160293878.1 | DUF4433 domain-containing protein | Toxin Detail |
| DX980_RS20635 (DX980_20545) | 36730..37803 | + | 1074 | WP_160293879.1 | macro domain-containing protein | Antitoxin Detail |
| DX980_RS20640 (DX980_20550) | 38508..39437 | + | 930 | WP_160293880.1 | hypothetical protein | - |
| DX980_RS20645 (DX980_20555) | 39434..41290 | + | 1857 | WP_160293881.1 | hypothetical protein | - |
| DX980_RS20650 | 41294..42235 | + | 942 | WP_160293882.1 | hypothetical protein | - |
| DX980_RS20655 (DX980_20560) | 42222..43277 | + | 1056 | WP_160293883.1 | methyltransferase | - |
| DX980_RS20660 (DX980_20565) | 43430..44014 | + | 585 | WP_268072909.1 | hypothetical protein | - |
| DX980_RS20665 (DX980_20570) | 44177..44725 | + | 549 | WP_160293885.1 | hypothetical protein | - |
| DX980_RS20670 | 44756..45205 | + | 450 | WP_160293886.1 | hypothetical protein | - |
| DX980_RS20675 (DX980_20575) | 45489..45695 | + | 207 | WP_160293887.1 | hypothetical protein | - |
| DX980_RS20680 (DX980_20580) | 45702..46424 | + | 723 | WP_201758253.1 | hypothetical protein | - |
| DX980_RS20685 (DX980_20585) | 46603..47346 | + | 744 | WP_160293888.1 | hypothetical protein | - |
| DX980_RS20690 (DX980_20590) | 47574..47840 | - | 267 | WP_160293889.1 | hypothetical protein | - |
| DX980_RS20695 (DX980_20595) | 47864..51013 | - | 3150 | WP_160293890.1 | error-prone DNA polymerase | - |
| DX980_RS20700 (DX980_20600) | 51020..52498 | - | 1479 | WP_160293891.1 | DNA polymerase Y family protein | - |
| DX980_RS20705 (DX980_20605) | 52416..53135 | - | 720 | WP_160293892.1 | translesion DNA synthesis-associated protein ImuA | - |
| DX980_RS20710 (DX980_20610) | 53615..55021 | + | 1407 | WP_160293893.1 | FRG domain-containing protein | - |
| DX980_RS20715 (DX980_20615) | 55155..55445 | + | 291 | WP_160293894.1 | DNA-binding protein Bv3F | VF |
| DX980_RS20720 (DX980_20620) | 55469..55936 | - | 468 | WP_160293895.1 | hypothetical protein | - |
| DX980_RS20725 (DX980_20625) | 55963..56442 | - | 480 | WP_160293896.1 | hypothetical protein | - |
| DX980_RS20730 (DX980_20630) | 56622..57035 | + | 414 | WP_098153420.1 | PAAR domain-containing protein | - |
| DX980_RS20735 (DX980_20635) | 57040..57537 | + | 498 | WP_160293897.1 | DUF4123 domain-containing protein | - |
| DX980_RS20740 (DX980_20640) | 57530..57997 | + | 468 | WP_160293898.1 | hypothetical protein | - |
| DX980_RS20745 (DX980_20645) | 57885..58472 | + | 588 | WP_160293899.1 | restriction endonuclease fold toxin 5 domain-containing protein | - |
| DX980_RS20750 (DX980_20650) | 58460..59209 | + | 750 | WP_236669328.1 | immunity 52 family protein | - |
| DX980_RS20755 (DX980_20655) | 59210..59752 | + | 543 | WP_160293900.1 | serine/threonine protein kinase | - |
| DX980_RS20760 (DX980_20660) | 59809..60375 | - | 567 | WP_160293901.1 | hypothetical protein | - |
| DX980_RS20765 (DX980_20665) | 60456..60875 | - | 420 | WP_036030891.1 | antirestriction protein | - |
| DX980_RS20770 (DX980_20670) | 61024..61323 | - | 300 | WP_036030888.1 | hypothetical protein | - |
| DX980_RS20775 (DX980_20675) | 61437..62318 | - | 882 | WP_160293902.1 | N-6 DNA methylase | - |
| DX980_RS20780 (DX980_20680) | 62390..62908 | - | 519 | WP_036030885.1 | hypothetical protein | - |
| DX980_RS20785 | 63037..63225 | + | 189 | WP_160293903.1 | hypothetical protein | - |
| DX980_RS20790 (DX980_20690) | 63373..63792 | - | 420 | WP_160293904.1 | hypothetical protein | - |
| DX980_RS20795 (DX980_20695) | 64603..64830 | - | 228 | WP_160293905.1 | hypothetical protein | - |
| DX980_RS20800 (DX980_20700) | 64901..65464 | - | 564 | WP_160293906.1 | DUF3577 domain-containing protein | - |
| DX980_RS20805 (DX980_20705) | 65982..67595 | - | 1614 | WP_160293907.1 | UvrD-helicase domain-containing protein | - |
| DX980_RS20810 (DX980_20710) | 67879..68166 | - | 288 | WP_160293908.1 | hypothetical protein | - |
| DX980_RS20815 (DX980_20715) | 68177..68479 | - | 303 | WP_160293909.1 | DNA-binding protein Bv3F | VF |
| DX980_RS20820 (DX980_20720) | 68476..69051 | - | 576 | WP_160293910.1 | lysophospholipid acyltransferase family protein | - |
| DX980_RS20825 (DX980_20725) | 69044..71383 | - | 2340 | WP_160293911.1 | DNA topoisomerase | - |
| DX980_RS20830 (DX980_20730) | 71380..71913 | - | 534 | WP_160293912.1 | hypothetical protein | - |
| DX980_RS20835 (DX980_20735) | 71916..72356 | - | 441 | WP_160293913.1 | single-stranded DNA-binding protein | - |
| DX980_RS20840 (DX980_20740) | 72872..73882 | + | 1011 | WP_236669329.1 | CAP domain-containing protein | - |
| DX980_RS20845 | 73940..74689 | - | 750 | WP_160293914.1 | hypothetical protein | - |
| DX980_RS20850 (DX980_20745) | 74697..75971 | - | 1275 | WP_160293915.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| DX980_RS20855 | 75982..76458 | - | 477 | WP_160293916.1 | hypothetical protein | - |
| DX980_RS20860 (DX980_20750) | 76458..77435 | - | 978 | WP_160293917.1 | ATPase, T2SS/T4P/T4SS family | - |
| DX980_RS20865 (DX980_20755) | 77457..77948 | - | 492 | WP_036057489.1 | type 4 pilus major pilin | - |
| DX980_RS20870 (DX980_20760) | 77998..79116 | - | 1119 | WP_160293918.1 | type II secretion system F family protein | - |
| DX980_RS20875 (DX980_20765) | 79113..80852 | - | 1740 | WP_160293919.1 | putative type II secretion system protein HxcR | VF |
| DX980_RS20880 (DX980_20770) | 80852..82072 | - | 1221 | WP_160293920.1 | type 4b pilus protein PilO2 | - |
| DX980_RS20885 (DX980_20775) | 82069..82704 | - | 636 | WP_160293921.1 | type IV pilus biogenesis protein PilP | - |
| DX980_RS20890 (DX980_20780) | 82716..84335 | - | 1620 | WP_160293922.1 | pilus assembly protein PilN | - |
| DX980_RS20895 (DX980_20785) | 84404..84736 | - | 333 | WP_160293923.1 | TcpQ domain-containing protein | - |
| DX980_RS20900 (DX980_20790) | 85096..85542 | - | 447 | WP_160293924.1 | hypothetical protein | VF |
| DX980_RS20905 (DX980_20795) | 85542..86585 | - | 1044 | WP_160293925.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| DX980_RS20910 (DX980_20800) | 86582..87892 | - | 1311 | WP_160293926.1 | TrbI/VirB10 family protein | - |
| DX980_RS20915 (DX980_20805) | 87899..88714 | - | 816 | WP_160293927.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| DX980_RS20920 (DX980_20810) | 88711..89469 | - | 759 | WP_160293928.1 | VirB8/TrbF family protein | - |
| DX980_RS20925 (DX980_20815) | 89736..89924 | + | 189 | WP_160293929.1 | hypothetical protein | - |
| DX980_RS20930 (DX980_20820) | 89921..90880 | - | 960 | WP_160293930.1 | hypothetical protein | VF |
| DX980_RS20935 (DX980_20825) | 90873..91208 | - | 336 | WP_160293931.1 | hypothetical protein | - |
| DX980_RS20940 (DX980_20830) | 91208..91486 | - | 279 | WP_160293932.1 | hypothetical protein | - |
| DX980_RS20945 (DX980_20835) | 91494..92261 | - | 768 | WP_160293933.1 | hypothetical protein | - |
| DX980_RS20950 (DX980_20840) | 92258..92887 | - | 630 | WP_160293934.1 | hypothetical protein | - |
| DX980_RS20955 (DX980_20845) | 92887..95526 | - | 2640 | WP_160293935.1 | hypothetical protein | - |
| DX980_RS20960 (DX980_20850) | 95534..95893 | - | 360 | WP_160293851.1 | hypothetical protein | - |
| DX980_RS20965 (DX980_20855) | 95899..96123 | - | 225 | WP_160293852.1 | hypothetical protein | - |
| DX980_RS20970 (DX980_20860) | 96127..97155 | - | 1029 | WP_160293853.1 | Type IV secretion system protein VirB11 | VF |
| DX980_RS20975 (DX980_20865) | 97139..97930 | - | 792 | WP_160293854.1 | Type IV secretion system protein virB1 | VF |
| DX980_RS20980 | 99285..100573 | + | 1289 | Protein_106 | TraI domain-containing protein | - |
| DX980_RS20985 (DX980_20885) | 100811..101198 | + | 388 | Protein_107 | DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|