MGE detailed information
MGE type: Mobilizable plasmid MGE length: 89515 bp
Accession: NZ_CP031346 Location: 1..89515 Organism: Escherichia coli O145 strain RM9873-C1 Replicon: plasmid pRM9873-C1
Accession: NZ_CP031346 Location: 1..89515 Organism: Escherichia coli O145 strain RM9873-C1 Replicon: plasmid pRM9873-C1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXE52_RS00005 () | 75..730 | - | 656 | Protein_0 | IS3 family transposase IS629 | Transposase |
| DXE52_RS00010 () | 2205..3026 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| DXE52_RS00015 () | 3026..4132 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| DXE52_RS00020 () | 4226..5947 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| DXE52_RS00025 () | 6021..7018 | + | 998 | Protein_4 | Lipid A biosynthesis myristoyltransferase | VF |
| DXE52_RS00030 () | 7071..7259 | + | 189 | Protein_5 | hypothetical protein | - |
| DXE52_RS00035 () | 7322..8860 | - | 1539 | WP_012917688.1 | IS66 family transposase ISEc8 | Transposase |
| DXE52_RS00040 () | 8910..9257 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| DXE52_RS00045 () | 9494..9859 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| DXE52_RS00050 () | 9859..11046 | + | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| DXE52_RS00055 () | 11325..12877 | - | 1553 | Protein_10 | IS66 family transposase ISSfl3 | Transposase |
| DXE52_RS00060 () | 12897..13244 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE52_RS00065 () | 13241..13915 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE52_RS00070 () | 13846..14265 | + | 420 | WP_136139077.1 | DUF1449 family protein | - |
| DXE52_RS00075 () | 14313..14525 | - | 213 | Protein_14 | IS3 family transposase ISSfl10 | Transposase |
| DXE52_RS00080 () | 14587..14760 | + | 174 | Protein_15 | IS66 family transposase | - |
| DXE52_RS00085 () | 15203..19105 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| DXE52_RS00090 () | 19649..19861 | + | 213 | Protein_17 | IS3 family transposase ISSfl10 | Transposase |
| DXE52_RS00095 () | 19909..20322 | - | 414 | WP_136138333.1 | DUF1449 family protein | - |
| DXE52_RS00100 () | 20321..21534 | + | 1214 | WP_162908518.1 | IS3 family transposase IS629 | Transposase |
| DXE52_RS00105 () | 21575..22062 | - | 488 | Protein_20 | IS3 family transposase ISSfl10 | Transposase |
| DXE52_RS00110 () | 22101..22421 | + | 321 | WP_001341409.1 | hypothetical protein | - |
| DXE52_RS00115 () | 22642..25362 | - | 2721 | WP_000991402.1 | Protein TraI | Relaxase |
| DXE52_RS00120 () | 25374..25706 | - | 333 | WP_001291056.1 | hypothetical protein | - |
| DXE52_RS00125 () | 25938..26273 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| DXE52_RS00130 () | 26359..27207 | - | 849 | WP_001341408.1 | DUF4942 domain-containing protein | - |
| DXE52_RS00135 () | 27452..27727 | + | 276 | WP_001431784.1 | hypothetical protein | - |
| DXE52_RS00140 () | 27786..28037 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| DXE52_RS00145 () | 28068..28313 | - | 246 | WP_012605149.1 | hypothetical protein | - |
| DXE52_RS00150 () | 28313..29203 | - | 891 | WP_000038351.1 | Recombination-promoting nuclease RpnA | VF |
| DXE52_RS00155 () | 29268..29534 | - | 267 | WP_001247865.1 | hypothetical protein | - |
| DXE52_RS00160 () | 29627..30061 | - | 435 | WP_000218854.1 | hypothetical protein | - |
| DXE52_RS00165 () | 30167..30787 | + | 621 | WP_162137195.1 | hypothetical protein | - |
| DXE52_RS00170 () | 30789..31289 | - | 501 | Protein_33 | antirestriction protein ArdA | - |
| DXE52_RS00175 () | 31751..32348 | - | 598 | Protein_34 | hypothetical protein | - |
| DXE52_RS00180 () | 32345..33064 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| DXE52_RS00185 () | 33061..33309 | - | 249 | Protein_36 | conjugation system SOS inhibitor PsiB | - |
| DXE52_RS00190 () | 33304..33543 | - | 240 | Protein_37 | hypothetical protein | - |
| DXE52_RS00195 () | 33588..34022 | - | 435 | WP_032315906.1 | DUF1380 family protein | - |
| DXE52_RS00200 () | 34034..34252 | - | 219 | WP_001443814.1 | hypothetical protein | - |
| DXE52_RS00205 () | 34252..34935 | - | 684 | WP_000086167.1 | DNA methylase | - |
| DXE52_RS00210 () | 35011..35322 | - | 312 | WP_012680995.1 | hypothetical protein | - |
| DXE52_RS00215 () | 35319..36221 | - | 903 | WP_077249722.1 | DUF1281 domain-containing protein | - |
| DXE52_RS00220 () | 36494..37453 | + | 960 | WP_000921957.1 | plasmid segregation protein ParM | - |
| DXE52_RS00225 () | 37453..37848 | + | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| DXE52_RS00230 () | 37928..38695 | - | 768 | Protein_45 | IS3 family transposase | - |
| DXE52_RS00235 () | 38809..39198 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| DXE52_RS00240 () | 39242..41452 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| DXE52_RS00250 () | 43644..44621 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| DXE52_RS00255 () | 44784..45011 | + | 228 | WP_001341442.1 | transposase | - |
| DXE52_RS00260 () | 45065..45739 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE52_RS00265 () | 45736..46083 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE52_RS00270 () | 46103..47655 | + | 1553 | Protein_53 | IS66 family transposase ISSfl3 | Transposase |
| DXE52_RS00275 () | 47689..48078 | + | 390 | Protein_54 | IS91 family transposase ISMno23 | Transposase |
| DXE52_RS00280 () | 48479..48844 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| DXE52_RS00285 () | 48844..50031 | + | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| DXE52_RS00290 () | 50622..51637 | + | 1016 | Protein_57 | IS91 family transposase ISEc37 | Transposase |
| DXE52_RS00295 () | 52257..53766 | + | 1510 | Protein_58 | ISL3 family transposase | - |
| DXE52_RS00300 () | 53817..53931 | - | 115 | Protein_59 | IS3 family transposase | - |
| DXE52_RS00305 () | 54018..54404 | + | 387 | Protein_60 | IS66 family transposase ISEc23 | Transposase |
| DXE52_RS00310 () | 54475..55627 | + | 1153 | Protein_61 | IS3 family transposase | - |
| DXE52_RS00315 () | 55639..57139 | + | 1501 | Protein_62 | IS66 family transposase | - |
| DXE52_RS00320 () | 57206..57614 | - | 409 | Protein_63 | IS3 family transposase | - |
| DXE52_RS00325 () | 57621..57851 | + | 231 | WP_001443774.1 | transposase | - |
| DXE52_RS00330 () | 57966..67464 | + | 9499 | Protein_65 | toxin B | - |
| DXE52_RS00335 () | 68424..69455 | - | 1032 | WP_000907857.1 | replication initiation protein | - |
| DXE52_RS00340 () | 70164..70805 | + | 642 | WP_000335839.1 | transcription termination factor NusG | - |
| DXE52_RS00345 () | 70946..71611 | + | 666 | WP_000154135.1 | hypothetical protein | - |
| DXE52_RS00350 () | 71878..72237 | + | 360 | Protein_69 | DUF1449 family protein | - |
| DXE52_RS00355 () | 72271..73823 | - | 1553 | Protein_70 | IS66 family transposase ISSfl3 | Transposase |
| DXE52_RS00360 () | 73843..74190 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE52_RS00365 () | 74187..74861 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE52_RS00370 () | 74915..75301 | - | 387 | WP_001066949.1 | tyrosine-type recombinase/integrase | - |
| DXE52_RS00375 () | 75429..76289 | + | 861 | WP_000704534.1 | putative protein YcjY | VF |
| DXE52_RS00385 () | 77900..78445 | + | 546 | WP_001165114.1 | hypothetical protein | - |
| DXE52_RS00390 () | 78607..79023 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DXE52_RS00395 () | 79020..79250 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| DXE52_RS00400 () | 79810..80222 | + | 413 | Protein_79 | hypothetical protein | - |
| DXE52_RS00405 () | 80224..81006 | + | 783 | WP_001164205.1 | site-specific integrase | - |
| DXE52_RS00410 () | 81179..81532 | + | 354 | WP_000864810.1 | colicin M immunity protein | - |
| DXE52_RS00415 () | 81540..81731 | - | 192 | Protein_82 | lipid II-degrading bacteriocin | - |
| DXE52_RS00420 () | 81735..81878 | - | 144 | Protein_83 | transcriptional regulator | - |
| DXE52_RS00425 () | 81945..83384 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| DXE52_RS00430 () | 83388..85508 | - | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| DXE52_RS00435 () | 85558..88553 | - | 2996 | Protein_86 | Hemolysin, chromosomal | VF |
| DXE52_RS00440 () | 88555..89070 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|