MGE detailed information
MGE type: Mobilizable plasmid MGE length: 88744 bp
Accession: NZ_CP031340 Location: 1..88744 Organism: Escherichia coli O145 strain RM12275-C1 Replicon: plasmid pRM12275-C1
Accession: NZ_CP031340 Location: 1..88744 Organism: Escherichia coli O145 strain RM12275-C1 Replicon: plasmid pRM12275-C1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXE55_RS00005 () | 75..730 | - | 656 | Protein_0 | IS3 family transposase IS629 | Transposase |
| DXE55_RS00010 () | 2204..3025 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| DXE55_RS00015 () | 3025..4130 | + | 1106 | Protein_2 | glycosyltransferase family 4 protein | - |
| DXE55_RS00020 () | 4224..5945 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| DXE55_RS00025 () | 6019..7017 | + | 999 | WP_012680945.1 | Lipid A biosynthesis myristoyltransferase | VF |
| DXE55_RS00030 () | 7070..7258 | + | 189 | Protein_5 | hypothetical protein | - |
| DXE55_RS00035 () | 7321..8859 | - | 1539 | WP_012917688.1 | IS66 family transposase ISEc8 | Transposase |
| DXE55_RS00040 () | 8909..9256 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| DXE55_RS00045 () | 9493..9858 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| DXE55_RS00050 () | 9858..11045 | + | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| DXE55_RS00055 () | 11324..12876 | - | 1553 | Protein_10 | IS66 family transposase ISSfl3 | Transposase |
| DXE55_RS00060 () | 12896..13243 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE55_RS00065 () | 13240..13914 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE55_RS00070 () | 13845..14264 | + | 420 | WP_136139077.1 | DUF1449 family protein | - |
| DXE55_RS00075 () | 14312..14524 | - | 213 | Protein_14 | IS3 family transposase ISSfl10 | Transposase |
| DXE55_RS00080 () | 14586..14759 | + | 174 | Protein_15 | IS66 family transposase | - |
| DXE55_RS00085 () | 15202..19103 | + | 3902 | Protein_16 | Serine protease EspP | VF |
| DXE55_RS00090 () | 19647..19775 | + | 129 | Protein_17 | IS3 family transposase ISSfl10 | Transposase |
| DXE55_RS00095 () | 19822..21035 | + | 1214 | WP_136952279.1 | IS3 family transposase IS629 | Transposase |
| DXE55_RS00100 () | 21220..21633 | - | 414 | WP_136138333.1 | DUF1449 family protein | - |
| DXE55_RS00105 () | 21632..22845 | + | 1214 | WP_162908515.1 | IS3 family transposase IS629 | Transposase |
| DXE55_RS00110 () | 22886..23574 | - | 689 | Protein_21 | IS3 family transposase IS600 | Transposase |
| DXE55_RS00115 () | 23613..23933 | + | 321 | WP_001341409.1 | hypothetical protein | - |
| DXE55_RS00120 () | 24154..26874 | - | 2721 | WP_000991402.1 | Protein TraI | Relaxase |
| DXE55_RS00125 () | 26886..27218 | - | 333 | WP_001291056.1 | hypothetical protein | - |
| DXE55_RS00130 () | 27450..27785 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| DXE55_RS00135 () | 27871..28719 | - | 849 | WP_001341408.1 | DUF4942 domain-containing protein | - |
| DXE55_RS00140 () | 28964..29239 | + | 276 | WP_001431784.1 | hypothetical protein | - |
| DXE55_RS00145 () | 29298..29549 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| DXE55_RS00150 () | 29580..29825 | - | 246 | WP_012605149.1 | hypothetical protein | - |
| DXE55_RS00155 () | 29825..30715 | - | 891 | WP_000038351.1 | Recombination-promoting nuclease RpnA | VF |
| DXE55_RS00160 () | 30780..31046 | - | 267 | WP_001247865.1 | hypothetical protein | - |
| DXE55_RS00165 () | 31139..31573 | - | 435 | WP_000218854.1 | hypothetical protein | - |
| DXE55_RS00170 () | 31679..32299 | + | 621 | WP_162137195.1 | hypothetical protein | - |
| DXE55_RS00175 () | 32301..32801 | - | 501 | WP_000117628.1 | antirestriction protein ArdA | - |
| DXE55_RS00180 () | 33263..33860 | - | 598 | Protein_35 | hypothetical protein | - |
| DXE55_RS00185 () | 33857..34576 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| DXE55_RS00190 () | 34573..34821 | - | 249 | Protein_37 | conjugation system SOS inhibitor PsiB | - |
| DXE55_RS00195 () | 34816..35055 | - | 240 | Protein_38 | hypothetical protein | - |
| DXE55_RS00200 () | 35100..35534 | - | 435 | WP_000274418.1 | DUF1380 family protein | - |
| DXE55_RS00205 () | 35546..35764 | - | 219 | WP_001443814.1 | hypothetical protein | - |
| DXE55_RS00210 () | 35764..36447 | - | 684 | WP_000086167.1 | DNA methylase | - |
| DXE55_RS00215 () | 36523..36834 | - | 312 | WP_012680995.1 | hypothetical protein | - |
| DXE55_RS00220 () | 36831..37733 | - | 903 | WP_077249722.1 | DUF1281 domain-containing protein | - |
| DXE55_RS00225 () | 38006..38965 | + | 960 | WP_000921957.1 | plasmid segregation protein ParM | - |
| DXE55_RS00230 () | 38965..39360 | + | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| DXE55_RS00235 () | 39440..40207 | - | 768 | Protein_46 | IS3 family transposase | - |
| DXE55_RS00240 () | 40321..40710 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| DXE55_RS00245 () | 40754..42127 | - | 1374 | Protein_48 | Catalase-peroxidase | VF |
| DXE55_RS00255 () | 44183..45160 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| DXE55_RS00260 () | 45323..45550 | + | 228 | WP_001341442.1 | transposase | - |
| DXE55_RS00265 () | 45604..46278 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE55_RS00270 () | 46275..46622 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE55_RS00275 () | 46642..48194 | + | 1553 | Protein_54 | IS66 family transposase ISSfl3 | Transposase |
| DXE55_RS00280 () | 48228..48617 | + | 390 | Protein_55 | IS91 family transposase ISMno23 | Transposase |
| DXE55_RS00285 () | 49018..49431 | + | 414 | WP_001344870.1 | hypothetical protein | - |
| DXE55_RS00290 () | 49382..50569 | + | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| DXE55_RS00295 () | 51160..52175 | + | 1016 | Protein_58 | IS91 family transposase ISEc37 | Transposase |
| DXE55_RS00300 () | 52795..54304 | + | 1510 | Protein_59 | ISL3 family transposase | - |
| DXE55_RS00305 () | 54355..54469 | - | 115 | Protein_60 | IS3 family transposase | - |
| DXE55_RS00310 () | 54556..54942 | + | 387 | Protein_61 | IS66 family transposase ISEc23 | Transposase |
| DXE55_RS00315 () | 55013..56165 | + | 1153 | Protein_62 | IS3 family transposase | - |
| DXE55_RS00320 () | 56177..57677 | + | 1501 | Protein_63 | IS66 family transposase | - |
| DXE55_RS00325 () | 57744..58152 | - | 409 | Protein_64 | IS3 family transposase | - |
| DXE55_RS00330 () | 58159..58389 | + | 231 | WP_001443774.1 | transposase | - |
| DXE55_RS00335 () | 58504..68000 | + | 9497 | Protein_66 | toxin B | - |
| DXE55_RS00340 () | 68960..69991 | - | 1032 | WP_000907857.1 | replication initiation protein | - |
| DXE55_RS00345 () | 70700..71341 | + | 642 | WP_000335839.1 | transcription termination factor NusG | - |
| DXE55_RS00350 () | 71482..72147 | + | 666 | WP_000154135.1 | hypothetical protein | - |
| DXE55_RS00355 () | 72414..72773 | + | 360 | Protein_70 | DUF1449 family protein | - |
| DXE55_RS00360 () | 72807..74359 | - | 1553 | Protein_71 | IS66 family transposase ISSfl3 | Transposase |
| DXE55_RS00365 () | 74379..74726 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE55_RS00370 () | 74723..75397 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE55_RS00375 () | 75451..75705 | - | 255 | WP_097455692.1 | tyrosine-type recombinase/integrase | - |
| DXE55_RS00385 () | 77127..77672 | + | 546 | WP_001165114.1 | hypothetical protein | - |
| DXE55_RS00390 () | 77834..78250 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DXE55_RS00395 () | 78247..78477 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| DXE55_RS00400 () | 79037..79450 | + | 414 | WP_000465041.1 | hypothetical protein | - |
| DXE55_RS00405 () | 79452..80234 | + | 783 | WP_001164205.1 | site-specific integrase | - |
| DXE55_RS00410 () | 80407..80760 | + | 354 | WP_000864810.1 | colicin M immunity protein | - |
| DXE55_RS00415 () | 80768..80959 | - | 192 | Protein_82 | lipid II-degrading bacteriocin | - |
| DXE55_RS00420 () | 80963..81106 | - | 144 | Protein_83 | transcriptional regulator | - |
| DXE55_RS00425 () | 81173..82612 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| DXE55_RS00430 () | 82616..84736 | - | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| DXE55_RS00435 () | 84786..87782 | - | 2997 | WP_000217745.1 | Hemolysin, chromosomal | VF |
| DXE55_RS00440 () | 87784..88299 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|