MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 121858 bp
Accession: NZ_CP031245 Location: 1473873..1595730 Organism: Streptococcus pneumoniae strain M16808 Replicon: chromosome
Accession: NZ_CP031245 Location: 1473873..1595730 Organism: Streptococcus pneumoniae strain M16808 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV119_RS08020 () | 1468890..1469966 | + | 1077 | WP_000542473.1 | aspartate-semialdehyde dehydrogenase | - |
| DV119_RS08025 () | 1470022..1470957 | + | 936 | WP_050104772.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| DV119_RS08030 () | 1471004..1472377 | - | 1374 | WP_044727673.1 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | - |
| DV119_RS08035 () | 1472513..1472695 | - | 183 | WP_001117401.1 | 4-oxalocrotonate tautomerase | - |
| DV119_RS08040 () | 1472819..1473409 | + | 591 | WP_000068152.1 | thymidine kinase | - |
| DV119_RS08045 () | 1473406..1474485 | + | 1080 | WP_001028801.1 | peptide chain release factor 1 | - |
| DV119_RS08050 () | 1474485..1475324 | + | 840 | WP_000761917.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| DV119_RS08055 () | 1475308..1475910 | + | 603 | WP_000969303.1 | threonylcarbamoyl-AMP synthase | - |
| DV119_RS08060 () | 1475912..1476343 | + | 432 | WP_050085562.1 | GNAT family N-acetyltransferase | - |
| DV119_RS08065 () | 1476405..1477661 | + | 1257 | WP_016569738.1 | serine hydroxymethyltransferase | - |
| DV119_RS08070 () | 1477669..1478643 | + | 975 | WP_001812264.1 | nucleoid-associated protein | - |
| DV119_RS08075 () | 1478643..1479257 | + | 615 | WP_000476387.1 | cell wall hydrolase Pmp23 | - |
| DV119_RS08080 () | 1479331..1480305 | + | 975 | WP_001227766.1 | DUF1002 domain-containing protein | - |
| DV119_RS08085 () | 1480379..1482010 | + | 1632 | WP_050205396.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| DV119_RS08090 () | 1482224..1482502 | + | 279 | WP_050111442.1 | hypothetical protein | - |
| DV119_RS08095 () | 1482748..1482966 | + | 219 | WP_001207345.1 | helix-turn-helix transcriptional regulator | - |
| DV119_RS08105 () | 1483359..1484384 | + | 1026 | WP_000790743.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| DV119_RS08110 () | 1484374..1485381 | + | 1008 | WP_001244692.1 | Ferric enterobactin transport system permease protein FepD | VF |
| DV119_RS08115 () | 1485381..1486388 | + | 1008 | WP_001180357.1 | putative siderophore transport system permease protein YfhA | VF |
| DV119_RS08120 () | 1486388..1487182 | + | 795 | WP_000677525.1 | putative siderophore transport system ATP-binding protein YusV | VF |
| DV119_RS08125 () | 1487570..1487959 | + | 390 | WP_074017679.1 | restriction endonuclease subunit S | - |
| DV119_RS11365 () | 1487931..1488239 | + | 309 | WP_162499171.1 | hypothetical protein | - |
| DV119_RS11560 () | 1488923..1489084 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| DV119_RS08140 () | 1489176..1490859 | + | 1684 | Protein_1479 | hypothetical protein ; Integrase | Integrase |
| DV119_RS08145 () | 1491127..1491693 | + | 567 | WP_000234988.1 | hypothetical protein | - |
| DV119_RS08150 () | 1492018..1492206 | + | 189 | WP_000179769.1 | hypothetical protein | - |
| DV119_RS08155 () | 1492268..1493083 | + | 816 | WP_050221225.1 | ATP-grasp domain-containing protein | - |
| DV119_RS08160 () | 1493083..1493937 | + | 855 | WP_000900015.1 | ADP-ribosylglycohydrolase family protein | - |
| DV119_RS08165 () | 1494049..1494933 | + | 885 | WP_050221224.1 | diacylglycerol kinase family lipid kinase | - |
| DV119_RS08170 () | 1495095..1495799 | + | 705 | WP_001865184.1 | alpha amylase N-terminal ig-like domain-containing protein | - |
| DV119_RS08175 () | 1495775..1496230 | + | 456 | WP_001865186.1 | hypothetical protein | - |
| DV119_RS08180 () | 1496675..1497151 | + | 477 | WP_000579612.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| DV119_RS08185 () | 1497151..1497912 | + | 762 | WP_054387416.1 | zeta toxin family protein | Toxin Detail |
| DV119_RS08190 () | 1497940..1498716 | + | 777 | Protein_1489 | hypothetical protein | - |
| DV119_RS08195 () | 1498644..1499096 | + | 453 | WP_078375108.1 | hypothetical protein | - |
| DV119_RS08200 () | 1499915..1500274 | + | 360 | WP_000003750.1 | hypothetical protein | - |
| DV119_RS08205 () | 1500284..1500649 | + | 366 | WP_000263054.1 | MobC family plasmid mobilization relaxosome protein | - |
| DV119_RS08210 () | 1500636..1502486 | + | 1851 | WP_054387417.1 | relaxase/mobilization nuclease domain-containing protein | - |
| DV119_RS08215 () | 1502742..1504177 | + | 1436 | Protein_1494 | transposase | - |
| DV119_RS08220 () | 1504415..1504549 | - | 135 | Protein_1495 | transposase family protein | - |
| DV119_RS08225 () | 1504870..1505823 | - | 954 | WP_001155339.1 | IS30 family transposase ISSpn8 | Transposase |
| DV119_RS08230 () | 1506182..1506996 | - | 815 | Protein_1497 | IS5 family transposase IS1515 | Transposase |
| DV119_RS08240 () | 1507035..1507793 | + | 759 | Protein_1498 | hypothetical protein | - |
| DV119_RS08245 () | 1507790..1508425 | + | 636 | WP_050221261.1 | chloramphenicol acetyltransferase | - |
| DV119_RS08250 () | 1508493..1510130 | + | 1638 | WP_000021543.1 | methionine--tRNA ligase | - |
| DV119_RS08255 () | 1510231..1510998 | + | 768 | WP_001061789.1 | tyrosine-protein phosphatase | - |
| DV119_RS08260 () | 1512015..1513007 | + | 993 | WP_024266136.1 | ABC transporter ATP-binding protein NatA | VF |
| DV119_RS08265 () | 1513009..1513827 | + | 819 | WP_000164265.1 | ABC-2 family transporter protein | - |
| DV119_RS08270 () | 1513829..1514614 | + | 786 | WP_000760754.1 | ABC transporter permease | - |
| DV119_RS08275 () | 1514993..1516188 | - | 1196 | Protein_1505 | IS110 family transposase | - |
| DV119_RS08280 () | 1516690..1516893 | + | 204 | WP_000275922.1 | helix-turn-helix transcriptional regulator | - |
| DV119_RS11565 () | 1517024..1517176 | + | 153 | WP_001812617.1 | hypothetical protein | - |
| DV119_RS08285 () | 1517343..1519136 | + | 1794 | WP_054387418.1 | hypothetical protein ; Integrase | Integrase |
| DV119_RS08290 () | 1519241..1519828 | + | 588 | WP_001812626.1 | Type 1 glutamine amidotransferase-like domain-containing protein | - |
| DV119_RS08295 () | 1520109..1520356 | + | 248 | Protein_1510 | aminoglycoside phosphotransferase | - |
| DV119_RS08300 () | 1520461..1520790 | + | 330 | Protein_1511 | IS5 family transposase IS1381A | Transposase |
| DV119_RS08305 () | 1520918..1522147 | + | 1230 | WP_000703353.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| DV119_RS08310 () | 1522168..1524864 | + | 2697 | WP_000058189.1 | phosphoenolpyruvate carboxylase | - |
| DV119_RS08315 () | 1525277..1526281 | + | 1005 | WP_000792163.1 | hypothetical protein | VF |
| DV119_RS08320 () | 1526350..1527216 | + | 867 | WP_000637238.1 | ABC transporter permease | - |
| DV119_RS08325 () | 1527213..1527971 | + | 759 | WP_000125408.1 | ABC transporter ATP-binding protein | - |
| DV119_RS08330 () | 1528061..1529821 | + | 1761 | WP_000227891.1 | DNA primase | - |
| DV119_RS08335 () | 1529824..1530933 | + | 1110 | WP_000201898.1 | RNA polymerase sigma factor RpoD | - |
| DV119_RS08340 () | 1530947..1531276 | + | 330 | WP_000331928.1 | metal-sulfur cluster assembly factor | - |
| DV119_RS08345 () | 1531391..1532434 | + | 1044 | WP_000412280.1 | alpha-galactosylglucosyldiacylglycerol synthase | - |
| DV119_RS08350 () | 1532450..1533775 | + | 1326 | WP_044792168.1 | glycosyltransferase family 4 protein | - |
| DV119_RS08355 () | 1533806..1533982 | + | 177 | WP_001256250.1 | PspC domain-containing protein | - |
| DV119_RS08360 () | 1534041..1534175 | + | 135 | WP_000863859.1 | DUF4044 domain-containing protein | - |
| DV119_RS08365 () | 1534239..1535549 | + | 1311 | WP_054387419.1 | GTPase ObgE | - |
| DV119_RS11570 () | 1535559..1535717 | + | 159 | WP_001808548.1 | hypothetical protein | - |
| DV119_RS11370 () | 1536736..1536810 | - | 75 | Protein_1526 | UDP-galactopyranose mutase | - |
| DV119_RS08375 () | 1536953..1538212 | + | 1260 | WP_054387420.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| DV119_RS08380 () | 1538228..1538779 | + | 552 | WP_001028736.1 | GNAT family N-acetyltransferase | - |
| DV119_RS08385 () | 1538772..1540049 | + | 1278 | WP_000033830.1 | CBS-HotDog domain-containing transcription factor SpxR | - |
| DV119_RS08390 () | 1540065..1540925 | + | 861 | WP_000631540.1 | methionyl aminopeptidase | - |
| DV119_RS08395 () | 1541148..1541258 | + | 111 | Protein_1531 | IS5 family transposase ISSpn7 | Transposase |
| DV119_RS08400 () | 1541304..1542108 | + | 805 | WP_114880848.1 | IS5 family transposase | - |
| DV119_RS08405 () | 1542300..1544591 | + | 2292 | WP_000992855.1 | DNA helicase PcrA | - |
| DV119_RS08410 () | 1544634..1545314 | + | 681 | WP_000286922.1 | DNA repair protein RadC | - |
| DV119_RS08415 () | 1545311..1546000 | - | 690 | WP_000743330.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | - |
| DV119_RS08420 () | 1546018..1546659 | - | 642 | WP_000653403.1 | redox-sensing transcriptional repressor Rex | - |
| DV119_RS08425 () | 1546742..1546957 | - | 216 | WP_000462487.1 | DUF4649 family protein | - |
| DV119_RS08430 () | 1546965..1547312 | - | 348 | WP_000863509.1 | DUF1831 domain-containing protein | - |
| DV119_RS08435 () | 1547317..1548432 | - | 1116 | WP_000639664.1 | cysteine desulfurase | - |
| DV119_RS08440 () | 1548442..1549401 | - | 960 | WP_001283813.1 | ribose-phosphate diphosphokinase | - |
| DV119_RS08445 () | 1549514..1550083 | - | 570 | WP_000681293.1 | CYTH domain-containing protein | - |
| DV119_RS08450 () | 1550211..1550882 | + | 672 | WP_000171676.1 | GTP pyrophosphokinase family protein | - |
| DV119_RS08455 () | 1550866..1551684 | + | 819 | WP_000799053.1 | NAD kinase | - |
| DV119_RS08460 () | 1551681..1552577 | + | 897 | WP_001210004.1 | RluA family pseudouridine synthase | - |
| DV119_RS08465 () | 1552621..1553595 | + | 975 | WP_000451586.1 | phosphate acetyltransferase | - |
| DV119_RS08470 () | 1553857..1555183 | - | 1327 | Protein_1546 | ISL3 family transposase | - |
| DV119_RS08475 () | 1555365..1555664 | - | 300 | WP_000981526.1 | YbaB/EbfC family nucleoid-associated protein | - |
| DV119_RS08480 () | 1556066..1556764 | + | 699 | WP_000509041.1 | DUF1275 domain-containing protein | - |
| DV119_RS08485 () | 1556952..1557266 | + | 315 | WP_000109141.1 | 50S ribosomal protein L21 | - |
| DV119_RS08490 () | 1557282..1557626 | + | 345 | WP_000613699.1 | ribosomal-processing cysteine protease Prp | - |
| DV119_RS08495 () | 1557643..1557936 | + | 294 | WP_000916509.1 | 50S ribosomal protein L27 | - |
| DV119_RS08505 () | 1558247..1558452 | - | 206 | Protein_1552 | ABC transporter substrate-binding protein | - |
| DV119_RS08510 () | 1558890..1559807 | + | 918 | WP_000587443.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| DV119_RS08515 () | 1559900..1560748 | - | 849 | WP_000592059.1 | YitT family protein | - |
| DV119_RS08520 () | 1560890..1561729 | + | 840 | WP_000161392.1 | DegV family protein | - |
| DV119_RS08525 () | 1561836..1562111 | + | 276 | WP_001284639.1 | HU family DNA-binding protein | - |
| DV119_RS08530 () | 1562536..1564437 | + | 1902 | WP_000584868.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| DV119_RS08535 () | 1564440..1565303 | + | 864 | Protein_1558 | XRE/MutR family transcriptional regulator | - |
| DV119_RS08540 () | 1565383..1566561 | + | 1179 | WP_001083024.1 | MFS transporter | - |
| DV119_RS08545 () | 1566654..1568612 | + | 1959 | WP_001042597.1 | NAD-dependent DNA ligase LigA | - |
| DV119_RS08550 () | 1568724..1571003 | + | 2280 | WP_054387423.1 | type I pullulanase | - |
| DV119_RS08555 () | 1571561..1572985 | + | 1425 | WP_000199371.1 | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase | - |
| DV119_RS08560 () | 1573361..1575289 | + | 1929 | WP_000370242.1 | 1,4-alpha-glucan branching protein GlgB | - |
| DV119_RS08565 () | 1575279..1576421 | + | 1143 | WP_000787276.1 | glucose-1-phosphate adenylyltransferase | - |
| DV119_RS08570 () | 1576411..1577550 | + | 1140 | WP_000687070.1 | glucose-1-phosphate adenylyltransferase subunit GlgD | - |
| DV119_RS08575 () | 1577547..1578980 | + | 1434 | WP_054387424.1 | glycogen synthase GlgA | - |
| DV119_RS11375 () | 1579039..1579410 | + | 372 | WP_001808482.1 | Phosphoserine phosphatase | VF |
| DV119_RS11380 () | 1579451..1579684 | + | 234 | WP_161801469.1 | HAD hydrolase family protein | - |
| DV119_RS08585 () | 1579693..1580808 | + | 1116 | WP_000706440.1 | glycerate kinase | - |
| DV119_RS08590 () | 1580805..1581251 | - | 447 | WP_054387425.1 | YueI family protein | - |
| DV119_RS08595 () | 1581415..1582719 | + | 1305 | WP_000022815.1 | phosphopyruvate hydratase | - |
| DV119_RS08600 () | 1582857..1583303 | - | 447 | WP_078162495.1 | tyrosine-type recombinase/integrase | - |
| DV119_RS08605 () | 1583203..1583415 | - | 213 | Protein_1573 | transposase | - |
| DV119_RS08610 () | 1583513..1584031 | - | 519 | Protein_1574 | IS630 family transposase IS630-Spn1 | Transposase |
| DV119_RS11575 () | 1584085..1584260 | + | 176 | Protein_1575 | diacylglycerol kinase family lipid kinase | - |
| DV119_RS08620 () | 1584460..1587735 | + | 3276 | WP_114880830.1 | ATP-dependent nuclease subunit B | - |
| DV119_RS08625 () | 1587732..1591382 | + | 3651 | WP_050104893.1 | helicase-exonuclease AddAB subunit AddA | - |
| DV119_RS11385 () | 1591344..1591511 | - | 168 | WP_001828683.1 | hypothetical protein | - |
| DV119_RS08635 () | 1591642..1592820 | + | 1179 | WP_000174787.1 | hypothetical protein | - |
| DV119_RS08640 () | 1593029..1598920 | + | 5892 | WP_054387427.1 | immunoglobulin A1 protease | - |
| DV119_RS08645 () | 1598972..1599175 | + | 204 | WP_078102781.1 | LPXTG cell wall anchor domain-containing protein | - |
| DV119_RS08650 () | 1599342..1600193 | + | 852 | WP_000201299.1 | ribosome biogenesis GTPase YlqF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|